Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0026696 Camellia sinensis var. sinensis HOM05D005334 ORTHO05D006560 1.8e-54 215.7 111 100.0
CSS0002721 Camellia sinensis var. sinensis HOM05D005334 ORTHO05D006560 6.4e-36 154.1 110 75.5
CSS0017464 Camellia sinensis var. sinensis HOM05D005334 ORTHO05D006560 4.3e-32 141.4 74 95.9
CSS0046374 Camellia sinensis var. sinensis HOM05D005334 ORTHO05D006560 1.3e-31 139.8 72 97.2
CSS0016906 Camellia sinensis var. sinensis HOM05D005334 ORTHO05D006560 4.8e-31 137.9 72 95.8
CiPaw.07G044700 Carya illinoinensis HOM05D005334 ORTHO05D006560 6.9e-30 134.0 71 88.7
CiPaw.07G045200 Carya illinoinensis HOM05D005334 ORTHO05D006560 3.4e-29 131.7 72 86.1
Hma1.2p1_0964F.1_g242010 Hydrangea macrophylla HOM05D005334 ORTHO05D006560 3.4e-29 131.7 72 88.9
Actinidia05483 Actinidia chinensis HOM05D005334 ORTHO05D006560 2.9e-28 128.6 72 87.5
Haze_03908 Corylus avellana HOM05D005334 ORTHO05D006560 2.9e-28 128.6 72 83.3
CsaV3_6G044840 Cucumis sativus L. HOM05D005334 ORTHO05D006560 2.9e-28 128.6 72 86.1
ClCG01G018260 Citrullus lanatus HOM05D005334 ORTHO05D006560 3.8e-28 128.3 72 84.7
Rhsim04G0113300 Rhododendron simsii HOM05D005334 ORTHO05D006560 3.8e-28 128.3 72 87.5
GSVIVG01003946001 Vitis vinifera HOM05D005334 ORTHO05D006560 3.8e-28 128.3 72 84.7
Cfa006855 Carpinus fangiana HOM05D005334 ORTHO05D006560 4.9e-28 127.9 72 83.3
QL06p036434 Quercus lobata HOM05D005334 ORTHO05D006560 6.4e-28 127.5 72 84.7
TAR625G0036 Trochodendron aralioides HOM05D005334 ORTHO05D006560 6.4e-28 127.5 72 83.3
COL.COLO4_25710 Corchorus olitorius HOM05D005334 ORTHO05D006560 8.4e-28 127.1 72 81.9
Thecc.10G018300 Theobroma cacao HOM05D005334 ORTHO05D006560 1.1e-27 126.7 72 83.3
Lj2C525G9 Lonicera japonica HOM05D005334 ORTHO05D006560 3.2e-27 125.2 72 87.5
Ca_14799_v3 Cicer arietinum L. HOM05D005334 ORTHO05D006560 4.2e-27 124.8 72 83.3
Duzib128G0185 Durio zibethinus HOM05D005334 ORTHO05D006560 4.2e-27 124.8 72 80.6
Medtr8g007340 Medicago truncatula HOM05D005334 ORTHO05D006560 4.2e-27 124.8 72 84.7
MELO3C007703.2 Cucumis melo HOM05D005334 ORTHO05D006560 5.5e-27 124.4 76 81.6
ECA233G4415 Erigeron canadensis HOM05D005334 ORTHO05D006560 5.5e-27 124.4 72 81.9
Gohir.D12G076300 Gossypium hirsutum HOM05D005334 ORTHO05D006560 5.5e-27 124.4 72 81.9
TWI34G1275 Tripterygium wilfordii HOM05D005334 ORTHO05D006560 5.5e-27 124.4 72 83.3
Gorai.008G084700 Gossypium raimondii HOM05D005334 ORTHO05D006560 7.1e-27 124.0 72 80.6
Sed0026061 Sechium edule HOM05D005334 ORTHO05D006560 7.1e-27 124.0 72 80.6
Psat4g223080 Pisum sativum HOM05D005334 ORTHO05D006560 9.3e-27 123.6 72 83.3
Solyc11g010950.2 Solanum lycopersicum HOM05D005334 ORTHO05D006560 1.2e-26 123.2 72 81.9
Sopen11g005690 Solanum pennellii HOM05D005334 ORTHO05D006560 1.2e-26 123.2 72 81.9
PGSC0003DMG400016186 Solanum tuberosum HOM05D005334 ORTHO05D006560 1.2e-26 123.2 72 81.9
Aqoxy6G01573 Aquilegia oxysepala HOM05D005334 ORTHO05D006560 1.6e-26 122.9 79 74.7
CAN.G1813.2 Capsicum annuum HOM05D005334 ORTHO05D006560 1.6e-26 122.9 72 80.6
Nitab4.5_0000402g0140 Nicotiana tabacum HOM05D005334 ORTHO05D006560 1.6e-26 122.9 72 80.6
PSO013G0112 Papaver somniferum HOM05D005334 ORTHO05D006560 1.6e-26 122.9 72 81.9
PSO832G1169 Papaver somniferum HOM05D005334 ORTHO05D006560 1.6e-26 122.9 72 81.9
arahy.Tifrunner.gnm1.ann1.D5QNLH Arachis hypogaea HOM05D005334 ORTHO05D006560 2.1e-26 122.5 72 83.3
arahy.Tifrunner.gnm1.ann1.DY9T0P Arachis hypogaea HOM05D005334 ORTHO05D006560 2.1e-26 122.5 72 83.3
Sabra10G0146100 Salix brachista HOM05D005334 ORTHO05D006560 2.1e-26 122.5 72 77.8
Sc03g0000510 Simmondsia chinensis HOM05D005334 ORTHO05D006560 2.1e-26 122.5 72 80.6
Ciclev10008715m.g Citrus clementina HOM05D005334 ORTHO05D006560 2.7e-26 122.1 72 84.7
Peaxi162Scf00085g00115 Petunia axillaris HOM05D005334 ORTHO05D006560 2.7e-26 122.1 72 80.6
Prupe.1G076500 Prunus persica HOM05D005334 ORTHO05D006560 2.7e-26 122.1 72 81.9
Ciclev10008278m.g Citrus clementina HOM05D005334 ORTHO05D006560 4.6e-26 121.3 72 83.3
Lj3g0001207 Lotus japonicus HOM05D005334 ORTHO05D006560 4.6e-26 121.3 72 81.9
Nn5g29815 Nelumbo nucifera HOM05D005334 ORTHO05D006560 4.6e-26 121.3 72 80.6
TPR.G5292 Trifolium pratense HOM05D005334 ORTHO05D006560 4.6e-26 121.3 72 81.9
Glyma.13G008300 Glycine max HOM05D005334 ORTHO05D006560 1.0e-25 120.2 72 80.6
vmacro09003 Vaccinium macrocarpon HOM05D005334 ORTHO05D006560 1.0e-25 120.2 72 83.3
CiPaw.07G045000 Carya illinoinensis HOM05D005334 ORTHO05D006560 1.3e-25 119.8 72 81.9
Lj2g0000099 Lotus japonicus HOM05D005334 ORTHO05D006560 1.3e-25 119.8 72 80.6
MD01G1042400 Malus domestica HOM05D005334 ORTHO05D006560 1.3e-25 119.8 72 80.6
PSO761G0425 Papaver somniferum HOM05D005334 ORTHO05D006560 1.3e-25 119.8 72 79.2
HanXRQChr08g0226671 Helianthus annuus HOM05D005334 ORTHO05D006560 1.8e-25 119.4 72 77.8
Lalb_Chr12g0210501 Lupinus albus HOM05D005334 ORTHO05D006560 1.8e-25 119.4 72 81.9
Potri.010G189500 Populus trichocarpa HOM05D005334 ORTHO05D006560 1.8e-25 119.4 72 76.4
CANSAT01G0836 Cannabis sativa HOM05D005334 ORTHO05D006560 2.3e-25 119.0 72 80.6
Cc07_g13790 Coffea canephora HOM05D005334 ORTHO05D006560 2.3e-25 119.0 73 79.5
Eucgr.A00094 Eucalyptus grandis HOM05D005334 ORTHO05D006560 2.3e-25 119.0 72 76.4
PSO700G0130 Papaver somniferum HOM05D005334 ORTHO05D006560 2.3e-25 119.0 72 77.8
RcHm_v2.0_Chr6g0270301 Rosa chinensis HOM05D005334 ORTHO05D006560 3.0e-25 118.6 72 79.2
Gohir.A12G078265 Gossypium hirsutum HOM05D005334 ORTHO05D006560 3.9e-25 118.2 72 80.6
RcHm_v2.0_Chr2g0110581 Rosa chinensis HOM05D005334 ORTHO05D006560 3.9e-25 118.2 82 72.0
RcHm_v2.0_Chr6g0270401 Rosa chinensis HOM05D005334 ORTHO05D006560 3.9e-25 118.2 72 77.8
FAN26G1496 Fragaria x ananassa HOM05D005334 ORTHO05D006560 5.1e-25 117.9 72 77.8
Phvul.010G045900 Phaseolus vulgaris HOM05D005334 ORTHO05D006560 5.1e-25 117.9 72 79.2
Phvul.010G046100 Phaseolus vulgaris HOM05D005334 ORTHO05D006560 5.1e-25 117.9 72 79.2
DCAR_003438 Daucus carota HOM05D005334 ORTHO05D006560 1.1e-24 116.7 71 78.9
FvH4_7g07230 Fragaria vesca HOM05D005334 ORTHO05D006560 1.1e-24 116.7 72 76.4
Cpa.g.sc19.179 Carica papaya HOM05D005334 ORTHO05D006560 1.5e-24 116.3 72 76.4
Lsat_1_v5_gn_6_15620 Lactuca sativa HOM05D005334 ORTHO05D006560 2.5e-24 115.5 72 76.4
SGA_v2.0_scaffold45G17221 Striga asiatica HOM05D005334 ORTHO05D006560 2.5e-24 115.5 72 77.8
PGR031G2068 Punica granatum HOM05D005334 ORTHO05D006560 3.3e-24 115.2 72 73.6
VMungo0331G1245 Vigna mungo HOM05D005334 ORTHO05D006560 5.6e-24 114.4 72 75.0
FvH4_1g19290 Fragaria vesca HOM05D005334 ORTHO05D006560 7.4e-24 114.0 72 76.4
FAN19G2596 Fragaria x ananassa HOM05D005334 ORTHO05D006560 7.4e-24 114.0 72 76.4
Os06g0639600 Oryza sativa ssp. japonica HOM05D005334 ORTHO05D006560 1.3e-23 113.2 72 75.0
FAN23G0357 Fragaria x ananassa HOM05D005334 ORTHO05D006560 1.6e-23 112.8 72 76.4
FAN23G0783 Fragaria x ananassa HOM05D005334 ORTHO05D006560 1.6e-23 112.8 72 76.4
unitig_0.g2648 Utricularia gibba HOM05D005334 ORTHO05D006560 2.8e-23 112.1 70 78.6
Migut.K00814 Erythranthe guttata HOM05D005334 ORTHO05D006560 3.7e-23 111.7 72 77.8
FAN03G2380 Fragaria x ananassa HOM05D005334 ORTHO05D006560 3.7e-23 111.7 72 75.0
Zm00001eb387250 Zea mays HOM05D005334 ORTHO05D006560 6.2e-23 110.9 72 72.2
MSTRG.3723 Avicennia marina HOM05D005334 ORTHO05D006560 1.8e-22 109.4 72 75.0
SalBow5G3116 Salvia bowleyana HOM05D005334 ORTHO05D006560 1.8e-22 109.4 72 76.4
SalBow5G4670 Salvia bowleyana HOM05D005334 ORTHO05D006560 1.8e-22 109.4 72 76.4
Manes.10G013400 Manihot esculenta HOM05D005334 ORTHO05D006560 4.0e-22 108.2 72 72.2
AL3G22740 Arabidopsis lyrata HOM05D005334 ORTHO05D006560 2.0e-21 105.9 72 68.1
AT3G11220 Arabidopsis thaliana HOM05D005334 ORTHO05D006560 2.0e-21 105.9 72 68.1
Carub.0003s1053 Capsella rubella HOM05D005334 ORTHO05D006560 2.0e-21 105.9 72 68.1
CARHR085780 Cardamine hirsuta HOM05D005334 ORTHO05D006560 2.0e-21 105.9 72 68.1
AUR62003692 Chenopodium quinoa HOM05D005334 ORTHO05D006560 2.6e-21 105.5 79 67.1
Thhalv10021017m.g Eutrema salsugineum HOM05D005334 ORTHO05D006560 2.6e-21 105.5 72 68.1
ATR1153G009 Amborella trichopoda HOM05D005334 ORTHO05D006560 3.4e-21 105.1 73 71.2
SEGI_17743 Sequoiadendron giganteum HOM05D005334 ORTHO05D006560 3.4e-21 105.1 72 66.7
MBI03_g45376_MAGBIO Magnolia biondii HOM05D005334 ORTHO05D006560 5.8e-21 104.4 71 71.8
Atru.chr12.1050 Acer truncatum HOM05D005334 ORTHO05D006560 7.6e-21 104.0 97 60.8
Glyma.03G108600 Glycine max HOM05D005334 ORTHO05D006560 1.0e-20 103.6 68 73.5
THA.LOC104816551 Tarenaya hassleriana HOM05D005334 ORTHO05D006560 1.0e-20 103.6 72 69.4
BcaC05g29390 Brassica carinata HOM05D005334 ORTHO05D006560 1.3e-20 103.2 72 66.7
A05p38080 Brassica napus HOM05D005334 ORTHO05D006560 1.3e-20 103.2 72 66.7
C05p56870 Brassica napus HOM05D005334 ORTHO05D006560 1.3e-20 103.2 72 66.7
BolC5t34351H Brassica oleracea HOM05D005334 ORTHO05D006560 1.3e-20 103.2 72 66.7
Aa31LG3G4530 Aethionema arabicum HOM05D005334 ORTHO05D006560 1.7e-20 102.8 72 66.7
BraA05t22600Z Brassica rapa HOM05D005334 ORTHO05D006560 1.7e-20 102.8 72 65.3
MBI03_g46739_MAGBIO Magnolia biondii HOM05D005334 ORTHO05D006560 1.7e-20 102.8 74 68.9
SHI03443 Sapria himalayana HOM05D005334 ORTHO05D006560 1.7e-20 102.8 72 66.7
BcaB06g25638 Brassica carinata HOM05D005334 ORTHO05D006560 2.9e-20 102.1 72 65.3
MBI10_g34777_MAGBIO Magnolia biondii HOM05D005334 ORTHO05D006560 6.5e-20 100.9 102 52.9
CDE04G2384 Ceratophyllum demersum HOM05D005334 ORTHO05D006560 1.4e-19 99.8 71 63.4
ATR0022G031 Amborella trichopoda HOM05D005334 ORTHO05D006560 1.9e-19 99.4 85 63.5
AUR62018003 Chenopodium quinoa HOM05D005334 ORTHO05D006560 1.9e-19 99.4 102 52.9
Sp3g09500 Schrenkiella parvula HOM05D005334 ORTHO05D006560 2.5e-19 99.0 72 62.5
AagrBONN_evm.TU.Sc2ySwM_117.1770 Anthoceros agrestis HOM05D005334 ORTHO05D006560 1.2e-18 96.7 72 61.1
Pp3c9_23940 Physcomitrium patens HOM05D005334 ORTHO05D006560 2.1e-18 95.9 82 58.5
CiPaw.07G049700 Carya illinoinensis HOM05D005334 ORTHO05D006560 8.7e-17 90.5 72 68.1
Mapoly0006s0234 Marchantia polymorpha HOM05D005334 ORTHO05D006560 3.7e-15 85.1 71 54.9
Dinv27014 Davidia involucrata HOM05D005334 ORTHO05D006560 2.2e-12 75.9 53 75.5
Thecc.09G278800 Theobroma cacao HOM05D005334 ORTHO05D006560 3.8e-12 75.1 40 90.0
SMO146G0066 Selaginella moellendorffii HOM05D005334 ORTHO05D006560 1.6e-10 69.7 72 45.8
Dinv36960 Davidia involucrata HOM05D005334 ORTHO05D006560 2.7e-10 68.9 40 87.5
MD01G1042700 Malus domestica HOM05D005334 ORTHO05D006560 1.1e-08 63.5 101 43.6
Ah.02g123390 Amaranthus hybridus HOM05D005334 ORTHO05D006560 2.8e-07 58.9 101 42.6
CBR_g30786 Chara braunii HOM05D000019 ORTHO05D000002 1.1e-06 57.0 95 31.6
Hund14075 Selenicereus undatus HOM05D005334 ORTHO05D006560 2.4e-06 55.8 32 75.0


User provided reference genes

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