Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0024784 Camellia sinensis var. sinensis HOM05D006779 ORTHO05D008491 8.6e-85 317.0 166 100.0
CSS0021002 Camellia sinensis var. sinensis HOM05D006779 ORTHO05D008491 1.5e-73 279.6 166 88.6
CSS0011815 Camellia sinensis var. sinensis HOM05D000591 ORTHO05D000579 1.7e-64 249.6 191 73.3
CSS0034996 Camellia sinensis var. sinensis HOM05D006779 ORTHO05D008491 1.7e-64 249.6 166 83.1
Actinidia00459 Actinidia chinensis HOM05D006779 ORTHO05D008491 7.6e-57 224.2 186 68.8
CSS0022737 Camellia sinensis var. sinensis HOM05D006779 ORTHO05D008491 1.3e-56 223.4 160 77.5
Rhsim11G0168500 Rhododendron simsii HOM05D006779 ORTHO05D008491 2.7e-46 189.1 223 53.4
CSS0005405 Camellia sinensis var. sinensis HOM05D006779 ORTHO05D008491 2.3e-45 186.0 119 83.2
CSS0011003 Camellia sinensis var. sinensis HOM05D006779 ORTHO05D008491 2.3e-45 186.0 119 83.2
vmacro02181 Vaccinium macrocarpon HOM05D006779 ORTHO05D008491 8.7e-45 184.1 228 51.3
Dinv23582 Davidia involucrata HOM05D006779 ORTHO05D008491 1.2e-41 173.7 189 58.2
Dinv42131 Davidia involucrata HOM05D006779 ORTHO05D008491 1.1e-39 167.2 193 56.5
Oeu064516.1 Olea europaea HOM05D006779 ORTHO05D008491 4.6e-38 161.8 186 54.3
SGA_v2.0_scaffold90G27688 Striga asiatica HOM05D006779 ORTHO05D008491 7.4e-36 154.5 183 51.9
SGA_v2.0_scaffold90G27693 Striga asiatica HOM05D006779 ORTHO05D008491 1.6e-35 153.3 183 51.9
FvH4_2g06680 Fragaria vesca HOM05D006779 ORTHO05D008491 2.4e-34 149.4 189 49.2
FAN24G0787 Fragaria x ananassa HOM05D006779 ORTHO05D008491 3.1e-34 149.1 189 49.2
CiPaw.05G054000 Carya illinoinensis HOM05D006779 ORTHO05D008491 6.9e-34 147.9 189 51.9
FAN15G3147 Fragaria x ananassa HOM05D006779 ORTHO05D008491 1.2e-33 147.1 189 48.7
FAN20G2937 Fragaria x ananassa HOM05D006779 ORTHO05D008491 1.2e-33 147.1 189 48.7
Cc02_g18560 Coffea canephora HOM05D006779 ORTHO05D008491 1.5e-33 146.7 193 51.8
Lj5C207T4 Lonicera japonica HOM05D006779 ORTHO05D008491 1.5e-33 146.7 165 59.4
Migut.B00314 Erythranthe guttata HOM05D006779 ORTHO05D008491 6.5e-32 141.4 191 49.7
RcHm_v2.0_Chr6g0258731 Rosa chinensis HOM05D006779 ORTHO05D008491 8.4e-32 141.0 189 47.6
Solyc01g108430.3 Solanum lycopersicum HOM05D006779 ORTHO05D008491 1.4e-31 140.2 194 47.9
PGSC0003DMG400025811 Solanum tuberosum HOM05D006779 ORTHO05D008491 1.4e-31 140.2 194 47.9
GSVIVG01031784001 Vitis vinifera HOM05D006779 ORTHO05D008491 2.5e-31 139.4 188 50.0
Haze_01903 Corylus avellana HOM05D006779 ORTHO05D008491 4.2e-31 138.7 189 48.7
Sopen01g050660 Solanum pennellii HOM05D006779 ORTHO05D008491 5.5e-31 138.3 194 47.4
Nitab4.5_0004334g0110 Nicotiana tabacum HOM05D006779 ORTHO05D008491 7.1e-31 137.9 195 48.7
QL11p037315 Quercus lobata HOM05D006779 ORTHO05D008491 1.6e-30 136.7 189 47.6
Lsat_1_v5_gn_5_113321 Lactuca sativa HOM05D006779 ORTHO05D008491 1.3e-29 133.7 175 50.3
Potri.009G105500 Populus trichocarpa HOM05D006779 ORTHO05D008491 3.9e-29 132.1 191 49.2
MELO3C018438.2 Cucumis melo HOM05D006779 ORTHO05D008491 5.1e-29 131.7 188 46.3
CsaV3_7G008730 Cucumis sativus L. HOM05D006779 ORTHO05D008491 5.1e-29 131.7 188 46.8
Sabra09G0080600 Salix brachista HOM05D006779 ORTHO05D008491 5.1e-29 131.7 191 48.2
Manes.15G142500 Manihot esculenta HOM05D006779 ORTHO05D008491 1.1e-28 130.6 189 47.1
MSTRG.16763 Avicennia marina HOM05D006779 ORTHO05D008491 2.5e-28 129.4 191 46.1
Eucgr.I01169 Eucalyptus grandis HOM05D006779 ORTHO05D008491 2.5e-28 129.4 187 45.5
Prupe.8G119200 Prunus persica HOM05D006779 ORTHO05D008491 2.5e-28 129.4 189 47.6
SalBow6G0615 Salvia bowleyana HOM05D006779 ORTHO05D008491 2.5e-28 129.4 188 46.8
Phvul.007G247000 Phaseolus vulgaris HOM05D006779 ORTHO05D008491 5.7e-28 128.3 186 45.2
DCAR_029018 Daucus carota HOM05D000144 ORTHO05D003364 2.8e-27 125.9 184 48.9
Thecc.02G097400 Theobroma cacao HOM05D006779 ORTHO05D008491 2.8e-27 125.9 188 48.9
Nitab4.5_0005583g0020 Nicotiana tabacum HOM05D006779 ORTHO05D008491 6.2e-27 124.8 194 45.4
FAN20G1913 Fragaria x ananassa HOM05D006779 ORTHO05D008491 9.0e-26 120.9 153 48.4
Sed0011670 Sechium edule HOM05D006779 ORTHO05D008491 1.2e-25 120.6 188 43.6
Aqoxy6G01411 Aquilegia oxysepala HOM05D006779 ORTHO05D008491 1.7e-24 116.7 188 40.4
PGR142G0644 Punica granatum HOM05D006779 ORTHO05D008491 1.7e-24 116.7 189 43.9
Sc18g0004890 Simmondsia chinensis HOM05D006779 ORTHO05D008491 2.2e-24 116.3 187 45.5
MD05G1075500 Malus domestica HOM05D006779 ORTHO05D008491 2.9e-24 115.9 189 45.5
CAN.G322.16 Capsicum annuum HOM05D006779 ORTHO05D008491 5.0e-24 115.2 190 44.7
TWI79G0004 Tripterygium wilfordii HOM05D006779 ORTHO05D008491 5.0e-24 115.2 193 45.1
Nn5g30192 Nelumbo nucifera HOM05D006779 ORTHO05D008491 6.5e-24 114.8 190 43.2
ECA234G4762 Erigeron canadensis HOM05D006779 ORTHO05D008491 1.1e-23 114.0 178 42.7
HPP92_004257 Vanilla planifolia HOM05D006779 ORTHO05D008491 4.2e-23 112.1 183 46.4
MBI02_g21199_MAGBIO Magnolia biondii HOM05D006779 ORTHO05D008491 7.1e-23 111.3 205 41.5
arahy.Tifrunner.gnm1.ann1.8ZG09Z Arachis hypogaea HOM05D006779 ORTHO05D008491 9.3e-23 110.9 188 44.1
Ciclev10029963m.g Citrus clementina HOM05D006779 ORTHO05D008491 9.3e-23 110.9 191 43.5
Gohir.D02G212600 Gossypium hirsutum HOM05D006779 ORTHO05D008491 1.6e-22 110.2 181 47.0
HPP92_004235 Vanilla planifolia HOM05D006779 ORTHO05D008491 1.6e-22 110.2 180 45.6
ClCG02G005780 Citrullus lanatus HOM05D006779 ORTHO05D008491 2.1e-22 109.8 183 41.5
Peaxi162Scf00016g01637 Petunia axillaris HOM05D006779 ORTHO05D008491 2.7e-22 109.4 179 43.6
Gorai.005G240600 Gossypium raimondii HOM05D006779 ORTHO05D008491 4.6e-22 108.6 181 46.4
Aa31LG10G4420 Aethionema arabicum HOM05D006779 ORTHO05D008491 6.1e-22 108.2 188 44.7
CANSAT25G0176 Cannabis sativa HOM05D006779 ORTHO05D008491 7.9e-22 107.8 191 44.5
Atru.chr5.2773 Acer truncatum HOM05D006779 ORTHO05D008491 1.0e-21 107.5 192 42.2
Gohir.A03G191700 Gossypium hirsutum HOM05D006779 ORTHO05D008491 1.0e-21 107.5 181 45.9
Glyma.01G146900 Glycine max HOM05D006779 ORTHO05D008491 1.3e-21 107.1 189 43.4
Glyma.10G112900 Glycine max HOM05D006779 ORTHO05D008491 1.3e-21 107.1 189 43.4
arahy.Tifrunner.gnm1.ann1.T066AP Arachis hypogaea HOM05D006779 ORTHO05D008491 3.0e-21 105.9 188 42.0
Lalb_Chr09g0328181 Lupinus albus HOM05D006779 ORTHO05D008491 3.0e-21 105.9 189 42.9
Sp1g36470 Schrenkiella parvula HOM05D006779 ORTHO05D008491 6.7e-21 104.8 182 45.1
unitig_60.g25783 Utricularia gibba HOM05D006779 ORTHO05D008491 8.7e-21 104.4 181 42.5
Thhalv10011741m.g Eutrema salsugineum HOM05D006779 ORTHO05D008491 1.9e-20 103.2 182 44.5
TWI31G0027 Tripterygium wilfordii HOM05D006779 ORTHO05D008491 3.3e-20 102.4 193 42.0
Hund00325 Selenicereus undatus HOM05D006779 ORTHO05D008491 4.3e-20 102.1 81 69.1
Psat7g121840 Pisum sativum HOM05D006779 ORTHO05D008491 5.7e-20 101.7 192 40.6
Glyma.02G159500 Glycine max HOM05D006779 ORTHO05D008491 1.3e-19 100.5 188 41.0
HanXRQChr10g0303251 Helianthus annuus HOM05D006779 ORTHO05D008491 2.8e-19 99.4 181 42.0
BcaNung06359 Brassica carinata HOM05D006779 ORTHO05D008491 4.8e-19 98.6 167 43.1
COL.COLO4_32686 Corchorus olitorius HOM05D006779 ORTHO05D008491 1.1e-18 97.4 184 45.1
arahy.Tifrunner.gnm1.ann1.QJKD6Y Arachis hypogaea HOM05D006779 ORTHO05D008491 1.8e-18 96.7 191 40.8
C06p04620 Brassica napus HOM05D006779 ORTHO05D008491 2.4e-18 96.3 183 42.6
BolC6t35591H Brassica oleracea HOM05D006779 ORTHO05D008491 2.4e-18 96.3 183 42.6
AT1G49590 Arabidopsis thaliana HOM05D006779 ORTHO05D008491 4.1e-18 95.5 181 43.1
EL10Ac3g06870 Beta vulgaris HOM05D006779 ORTHO05D008491 5.3e-18 95.1 186 42.5
Ca_18655_v3 Cicer arietinum L. HOM05D006779 ORTHO05D008491 1.5e-17 93.6 177 41.8
A06p03540 Brassica napus HOM05D006779 ORTHO05D008491 2.0e-17 93.2 183 41.5
BraA06t23562Z Brassica rapa HOM05D006779 ORTHO05D008491 4.5e-17 92.0 184 41.3
AUR62034187 Chenopodium quinoa HOM05D006779 ORTHO05D008491 6.5e-16 88.2 180 41.7
Ah.04g152710 Amaranthus hybridus HOM05D006779 ORTHO05D008491 1.1e-15 87.4 157 42.7
Lj4g0006122 Lotus japonicus HOM05D006779 ORTHO05D008491 1.4e-15 87.0 168 42.3
PSO541G4058 Papaver somniferum HOM05D006779 ORTHO05D008491 7.2e-15 84.7 186 38.2
Carub.0001s3879 Capsella rubella HOM05D006779 ORTHO05D008491 9.4e-15 84.3 189 39.7
CARHR039640 Cardamine hirsuta HOM05D006779 ORTHO05D008491 3.6e-14 82.4 70 68.6
Zm00001eb373090 Zea mays HOM05D006779 ORTHO05D008491 3.6e-14 82.4 185 37.3
CDE03G0027 Ceratophyllum demersum HOM05D006779 ORTHO05D008491 4.6e-14 82.0 156 37.8
AL1G56960 Arabidopsis lyrata HOM05D006779 ORTHO05D008491 3.0e-13 79.3 70 65.7
CDE06G1966 Ceratophyllum demersum HOM05D006779 ORTHO05D008491 3.9e-13 79.0 156 37.2
AUR62022456 Chenopodium quinoa HOM05D006779 ORTHO05D008491 6.7e-13 78.2 220 33.6
PSO675G5018 Papaver somniferum HOM05D006779 ORTHO05D008491 4.3e-12 75.5 186 36.6
ATR0097G032 Amborella trichopoda HOM05D006779 ORTHO05D008491 7.4e-12 74.7 154 38.3
TPR.G23531 Trifolium pratense HOM05D006779 ORTHO05D008491 3.7e-11 72.4 64 67.2
SHI05379 Sapria himalayana HOM05D006779 ORTHO05D008491 6.3e-11 71.6 193 34.7
Medtr4g086640 Medicago truncatula HOM05D006779 ORTHO05D008491 6.9e-10 68.2 76 57.9
AUR62042088 Chenopodium quinoa HOM05D006779 ORTHO05D008491 2.9e-08 62.8 155 38.1
TAR628G1516 Trochodendron aralioides HOM05D006779 ORTHO05D008491 2.7e-06 56.2 81 49.4


User provided reference genes

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