Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0024742 Camellia sinensis var. sinensis HOM05D001054 ORTHO05D007110 5.5e-200 700.7 332 100.0
Thecc.01G069100 Theobroma cacao HOM05D001054 ORTHO05D007110 4.8e-188 661.0 332 91.9
Gorai.008G080600 Gossypium raimondii HOM05D001054 ORTHO05D007110 3.1e-187 658.3 332 91.9
Hma1.2p1_0017F.1_g012090 Hydrangea macrophylla HOM05D001054 ORTHO05D007110 3.1e-187 658.3 332 92.8
MSTRG.23690 Avicennia marina HOM05D001054 ORTHO05D007110 2.7e-186 655.2 332 91.3
Gohir.D12G073300 Gossypium hirsutum HOM05D001054 ORTHO05D007110 3.5e-186 654.8 332 91.3
Oeu013280.1 Olea europaea HOM05D001054 ORTHO05D007110 4.5e-186 654.4 332 90.7
Duzib264G0621 Durio zibethinus HOM05D001054 ORTHO05D007110 6.5e-185 650.6 332 90.4
Cc07_g06840 Coffea canephora HOM05D001054 ORTHO05D007110 8.5e-185 650.2 329 91.5
Lj7C88G8 Lonicera japonica HOM05D001054 ORTHO05D007110 8.5e-185 650.2 331 91.2
TWI09G0178 Tripterygium wilfordii HOM05D001054 ORTHO05D007110 1.5e-184 649.4 332 89.2
SalBow6G1211 Salvia bowleyana HOM05D001054 ORTHO05D007110 7.2e-184 647.1 332 89.2
Migut.H00367 Erythranthe guttata HOM05D001054 ORTHO05D007110 9.5e-184 646.7 331 91.8
Cpa.g.sc6.46 Carica papaya HOM05D001054 ORTHO05D007110 1.6e-183 646.0 332 89.5
PGSC0003DMG400023692 Solanum tuberosum HOM05D001054 ORTHO05D007110 1.6e-183 646.0 332 89.8
Solyc10g080040.3 Solanum lycopersicum HOM05D001054 ORTHO05D007110 4.7e-183 644.4 332 89.5
HanXRQChr14g0441861 Helianthus annuus HOM05D001054 ORTHO05D007110 6.1e-183 644.0 332 89.8
Sopen10g030650 Solanum pennellii HOM05D001054 ORTHO05D007110 1.0e-182 643.3 332 89.2
MBI19_g10811_MAGBIO Magnolia biondii HOM05D001054 ORTHO05D007110 3.0e-182 641.7 332 88.3
PSO541G5579 Papaver somniferum HOM05D001054 ORTHO05D007110 5.2e-182 641.0 332 88.3
Aa31LG6G14390 Aethionema arabicum HOM05D001054 ORTHO05D007110 8.8e-182 640.2 332 88.6
TAR625G0225 Trochodendron aralioides HOM05D001054 ORTHO05D007110 8.8e-182 640.2 332 88.3
PSO675G2247 Papaver somniferum HOM05D001054 ORTHO05D007110 1.2e-181 639.8 332 88.0
Manes.13G113500 Manihot esculenta HOM05D001054 ORTHO05D007110 1.5e-181 639.4 330 88.2
COL.COLO4_11542 Corchorus olitorius HOM05D001054 ORTHO05D007110 2.0e-181 639.0 331 89.1
AT4G37510 Arabidopsis thaliana HOM05D001054 ORTHO05D007110 4.4e-181 637.9 332 87.7
Nn7g37208 Nelumbo nucifera HOM05D001054 ORTHO05D007110 4.4e-181 637.9 332 87.0
CARHR245910 Cardamine hirsuta HOM05D001054 ORTHO05D007110 7.5e-181 637.1 332 87.7
Carub.0007s0278 Capsella rubella HOM05D001054 ORTHO05D007110 9.8e-181 636.7 332 87.3
TAR628G0943 Trochodendron aralioides HOM05D001054 ORTHO05D007110 1.7e-180 636.0 332 87.7
Sc16g0004970 Simmondsia chinensis HOM05D001054 ORTHO05D007110 3.7e-180 634.8 331 87.9
AL7G13250 Arabidopsis lyrata HOM05D001054 ORTHO05D007110 6.3e-180 634.0 332 87.0
Ciclev10025341m.g Citrus clementina HOM05D001054 ORTHO05D007110 8.3e-180 633.6 330 88.2
THA.LOC104807624 Tarenaya hassleriana HOM05D001054 ORTHO05D007110 8.3e-180 633.6 332 87.3
Thhalv10024858m.g Eutrema salsugineum HOM05D001054 ORTHO05D007110 1.1e-179 633.3 332 86.7
Sed0024674 Sechium edule HOM05D001054 ORTHO05D007110 1.1e-179 633.3 332 86.1
FvH4_1g17270 Fragaria vesca HOM05D001054 ORTHO05D007110 1.4e-179 632.9 331 87.3
Sp7g35190 Schrenkiella parvula HOM05D001054 ORTHO05D007110 1.4e-179 632.9 332 86.1
CiPaw.01G007000 Carya illinoinensis HOM05D001054 ORTHO05D007110 2.4e-179 632.1 331 86.7
Aqoxy2G00045 Aquilegia oxysepala HOM05D001054 ORTHO05D007110 4.1e-179 631.3 332 87.3
EL10Ac6g15648 Beta vulgaris HOM05D001054 ORTHO05D007110 7.0e-179 630.6 332 86.1
Prupe.6G223800 Prunus persica HOM05D001054 ORTHO05D007110 9.2e-179 630.2 331 87.0
CANSAT01G2549 Cannabis sativa HOM05D001054 ORTHO05D007110 1.6e-178 629.4 332 86.4
DCAR_010834 Daucus carota HOM05D001054 ORTHO05D007110 2.0e-178 629.0 344 84.6
Cfa004102 Carpinus fangiana HOM05D001054 ORTHO05D007110 2.7e-178 628.6 331 86.7
CsaV3_6G043910 Cucumis sativus L. HOM05D001054 ORTHO05D007110 5.9e-178 627.5 332 85.2
BcaNung05084 Brassica carinata HOM05D001054 ORTHO05D007110 1.7e-177 625.9 331 85.2
Eucgr.C03692 Eucalyptus grandis HOM05D001054 ORTHO05D007110 1.7e-177 625.9 331 85.2
Peaxi162Scf00365g00936 Petunia axillaris HOM05D001054 ORTHO05D007110 1.7e-177 625.9 329 88.4
Sed0014779 Sechium edule HOM05D001054 ORTHO05D007110 1.7e-177 625.9 332 85.2
Atru.chr3.194 Acer truncatum HOM05D001054 ORTHO05D007110 2.3e-177 625.5 331 87.3
Rhsim10G0102900 Rhododendron simsii HOM05D001054 ORTHO05D007110 3.8e-177 624.8 378 79.4
A01p01450 Brassica napus HOM05D001054 ORTHO05D007110 6.6e-177 624.0 332 85.2
BraA01t00139Z Brassica rapa HOM05D001054 ORTHO05D007110 6.6e-177 624.0 332 85.2
Nitab4.5_0006689g0010 Nicotiana tabacum HOM05D001054 ORTHO05D007110 6.6e-177 624.0 332 88.0
BcaNung03665 Brassica carinata HOM05D001054 ORTHO05D007110 8.6e-177 623.6 331 85.2
C01p01620 Brassica napus HOM05D001054 ORTHO05D007110 8.6e-177 623.6 331 85.2
AUR62040267 Chenopodium quinoa HOM05D001054 ORTHO05D007110 8.6e-177 623.6 332 85.8
Eucgr.C03920 Eucalyptus grandis HOM05D001054 ORTHO05D007110 8.6e-177 623.6 331 84.9
FAN19G1445 Fragaria x ananassa HOM05D001054 ORTHO05D007110 8.6e-177 623.6 340 84.7
AUR62003982 Chenopodium quinoa HOM05D001054 ORTHO05D007110 1.5e-176 622.9 332 85.8
Nitab4.5_0002331g0050 Nicotiana tabacum HOM05D001054 ORTHO05D007110 1.9e-176 622.5 332 87.7
Hund13932 Selenicereus undatus HOM05D001054 ORTHO05D007110 1.9e-176 622.5 332 85.2
PGR004G0129 Punica granatum HOM05D001054 ORTHO05D007110 2.5e-176 622.1 332 85.5
BolC1t00157H Brassica oleracea HOM05D001054 ORTHO05D007110 3.3e-176 621.7 331 84.9
Atru.chr3.165 Acer truncatum HOM05D001054 ORTHO05D007110 7.3e-176 620.5 334 86.8
SGA_v2.0_scaffold72G24093 Striga asiatica HOM05D001054 ORTHO05D007110 9.5e-176 620.2 329 86.9
ClCG01G017380 Citrullus lanatus HOM05D001054 ORTHO05D007110 2.1e-175 619.0 332 84.9
Lsat_1_v5_gn_2_83701 Lactuca sativa HOM05D001054 ORTHO05D007110 1.8e-174 615.9 332 85.8
Potri.007G053000 Populus trichocarpa HOM05D001054 ORTHO05D007110 1.8e-174 615.9 331 83.7
FAN26G1436 Fragaria x ananassa HOM05D001054 ORTHO05D007110 3.0e-174 615.1 366 79.0
Os01g0810100 Oryza sativa ssp. japonica HOM05D001054 ORTHO05D007110 5.2e-174 614.4 330 84.5
MELO3C007616.2 Cucumis melo HOM05D001054 ORTHO05D007110 8.9e-174 613.6 358 79.3
FAN23G1327 Fragaria x ananassa HOM05D001054 ORTHO05D007110 8.9e-174 613.6 354 80.8
unitig_0.g506 Utricularia gibba HOM05D001054 ORTHO05D007110 4.4e-173 611.3 328 86.9
Ca_24720_v3 Cicer arietinum L. HOM05D001054 ORTHO05D007110 1.3e-172 609.8 329 86.0
ECA238G1085 Erigeron canadensis HOM05D001054 ORTHO05D007110 3.7e-172 608.2 319 87.5
Psat2g170280 Pisum sativum HOM05D001054 ORTHO05D007110 6.4e-172 607.4 332 84.3
TPR.G20955 Trifolium pratense HOM05D001054 ORTHO05D007110 6.4e-172 607.4 332 85.2
RcHm_v2.0_Chr2g0107461 Rosa chinensis HOM05D001054 ORTHO05D007110 1.4e-171 606.3 385 74.8
Sabra07G0046600 Salix brachista HOM05D001054 ORTHO05D007110 2.4e-171 605.5 331 83.1
SGA_v2.0_scaffold15G07420 Striga asiatica HOM05D001054 ORTHO05D007110 4.1e-171 604.7 332 85.2
CDE04G1953 Ceratophyllum demersum HOM05D001054 ORTHO05D007110 7.0e-171 604.0 332 84.9
Glyma.01G192200 Glycine max HOM05D001054 ORTHO05D007110 2.7e-170 602.1 329 83.6
Medtr5g016070 Medicago truncatula HOM05D001054 ORTHO05D007110 7.8e-170 600.5 332 84.0
ATR1096G061 Amborella trichopoda HOM05D001054 ORTHO05D007110 1.0e-169 600.1 331 81.9
Haze_15309 Corylus avellana HOM05D001054 ORTHO05D007110 1.7e-169 599.4 351 80.1
HPP92_018502 Vanilla planifolia HOM05D001054 ORTHO05D007110 5.0e-169 597.8 331 81.9
Ah.02g125600 Amaranthus hybridus HOM05D001054 ORTHO05D007110 8.6e-169 597.0 327 83.8
DCAR_021470 Daucus carota HOM05D001054 ORTHO05D007110 5.6e-168 594.3 319 86.2
Glyma.11G049900 Glycine max HOM05D001054 ORTHO05D007110 1.6e-167 592.8 329 82.4
Lj2g0007837 Lotus japonicus HOM05D001054 ORTHO05D007110 1.4e-166 589.7 329 82.4
CSS0030463 Camellia sinensis var. sinensis HOM05D001054 ORTHO05D007110 5.2e-166 587.8 322 89.8
Lj4g0019986 Lotus japonicus HOM05D001054 ORTHO05D007110 5.2e-166 587.8 332 82.8
Phvul.002G012600 Phaseolus vulgaris HOM05D001054 ORTHO05D007110 2.0e-165 585.9 329 81.2
VMungo1215G2035 Vigna mungo HOM05D001054 ORTHO05D007110 3.4e-165 585.1 329 81.2
VMungo0251G1033 Vigna mungo HOM05D001054 ORTHO05D007110 1.7e-164 582.8 331 81.0
arahy.Tifrunner.gnm1.ann1.5YK3TE Arachis hypogaea HOM05D001054 ORTHO05D007110 1.1e-163 580.1 332 79.8
arahy.Tifrunner.gnm1.ann1.S94KHE Arachis hypogaea HOM05D001054 ORTHO05D007110 4.6e-162 574.7 346 76.9
arahy.Tifrunner.gnm1.ann1.AR4BCX Arachis hypogaea HOM05D001054 ORTHO05D007110 6.0e-162 574.3 331 79.5
arahy.Tifrunner.gnm1.ann1.V4EKGG Arachis hypogaea HOM05D001054 ORTHO05D007110 6.0e-162 574.3 346 76.9
arahy.Tifrunner.gnm1.ann1.UKA06W Arachis hypogaea HOM05D001054 ORTHO05D007110 1.3e-161 573.2 331 79.5
Lalb_Chr05g0213551 Lupinus albus HOM05D001054 ORTHO05D007110 1.3e-161 573.2 332 80.1
Psat4g083600 Pisum sativum HOM05D001054 ORTHO05D007110 3.0e-161 572.0 329 78.7
Phvul.003G236900 Phaseolus vulgaris HOM05D001054 ORTHO05D007110 3.9e-161 571.6 331 78.9
Lalb_Chr09g0323511 Lupinus albus HOM05D001054 ORTHO05D007110 6.6e-161 570.9 343 78.1
HPP92_017544 Vanilla planifolia HOM05D001054 ORTHO05D007110 4.3e-160 568.2 331 78.5
Medtr4g095410 Medicago truncatula HOM05D001054 ORTHO05D007110 9.5e-160 567.0 329 78.4
TPR.G23864 Trifolium pratense HOM05D001054 ORTHO05D007110 8.1e-159 563.9 329 78.4
arahy.Tifrunner.gnm1.ann1.SB8Z2H Arachis hypogaea HOM05D001054 ORTHO05D007110 1.7e-156 556.2 354 73.7
GSVIVG01000148001 Vitis vinifera HOM05D001054 ORTHO05D007110 3.5e-154 548.5 281 89.0
Actinidia36442 Actinidia chinensis HOM05D001054 ORTHO05D007110 1.2e-146 523.5 274 89.8
Zm00001eb150280 Zea mays HOM05D001054 ORTHO05D007110 2.4e-142 509.2 272 84.2
vmacro05387 Vaccinium macrocarpon HOM05D001054 ORTHO05D007110 2.9e-140 502.3 344 70.9
Gohir.A12G075200 Gossypium hirsutum HOM05D001054 ORTHO05D007110 2.0e-125 453.0 228 90.4
Pp3c5_10700 Physcomitrium patens HOM05D001054 ORTHO05D007110 2.3e-113 412.9 327 57.8
Mapoly0005s0153 Marchantia polymorpha HOM05D001054 ORTHO05D007110 2.5e-112 409.5 328 58.5
Dinv26904 Davidia involucrata HOM05D001054 ORTHO05D007110 7.2e-107 391.3 198 89.4
SMO119G0428 Selaginella moellendorffii HOM05D001054 ORTHO05D007110 7.9e-106 387.9 328 56.7
AagrBONN_evm.TU.Sc2ySwM_368.879 Anthoceros agrestis HOM05D001054 ORTHO05D007110 2.2e-103 379.8 289 62.3
MD15G1293700 Malus domestica HOM05D001054 ORTHO05D007110 7.2e-91 338.2 181 84.5
HPP92_017568 Vanilla planifolia HOM05D001054 ORTHO05D007110 1.6e-90 337.0 197 77.7
Duzib147G0207 Durio zibethinus HOM05D001054 ORTHO05D007110 3.6e-90 335.9 182 87.4
AL5G41245 Arabidopsis lyrata HOM05D001054 ORTHO05D007110 2.9e-84 316.2 178 82.6
SEGI_29234 Sequoiadendron giganteum HOM05D001054 ORTHO05D007110 1.2e-80 304.3 198 69.2
AL7G13080 Arabidopsis lyrata HOM05D001054 ORTHO05D007110 5.0e-76 288.9 172 77.9
SEGI_10508 Sequoiadendron giganteum HOM05D001054 ORTHO05D007110 1.6e-58 230.7 135 77.0
Glyma.05G104100 Glycine max HOM05D001054 ORTHO05D007110 1.0e-57 228.0 132 77.3
Actinidia11996 Actinidia chinensis HOM05D001054 ORTHO05D007110 4.6e-45 186.0 115 77.4
Eucgr.C03694 Eucalyptus grandis HOM05D001054 ORTHO05D026867 1.1e-43 181.4 102 80.4
Actinidia11995 Actinidia chinensis HOM05D001054 ORTHO05D038022 2.7e-37 160.2 81 91.4
Oeu038701.1 Olea europaea HOM05D001054 ORTHO05D038022 1.3e-28 131.3 68 86.8
vmacro05388 Vaccinium macrocarpon HOM05D001054 ORTHO05D007110 1.2e-26 124.8 62 90.3
AT2G48121 Arabidopsis thaliana HOM05D001054 ORTHO05D026867 1.6e-21 107.8 58 84.5
A03p65210 Brassica napus HOM05D001054 ORTHO05D026867 4.6e-21 106.3 60 80.0
BraA03t15579Z Brassica rapa HOM05D001054 ORTHO05D026867 4.6e-21 106.3 60 80.0
C07p62420 Brassica napus HOM05D001054 ORTHO05D007110 9.6e-19 98.6 53 83.0
BcaNung02059 Brassica carinata HOM05D001054 ORTHO05D007110 2.4e-17 94.0 50 82.0
FAN28G0670 Fragaria x ananassa HOM05D001054 ORTHO05D007110 3.2e-06 57.0 27 92.6


User provided reference genes

Program Settings