Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0024704 Camellia sinensis var. sinensis HOM05D004387 ORTHO05D005218 3.0e-174 615.1 322 100.0
CSS0010572 Camellia sinensis var. sinensis HOM05D004387 ORTHO05D005218 8.5e-113 411.0 338 69.8
CSS0003189 Camellia sinensis var. sinensis HOM05D004387 ORTHO05D005218 5.7e-109 398.3 330 68.5
Dinv39602 Davidia involucrata HOM05D004387 ORTHO05D005218 3.7e-108 395.6 327 68.2
Dinv12482 Davidia involucrata HOM05D004387 ORTHO05D005218 2.0e-106 389.8 328 67.7
Actinidia17236 Actinidia chinensis HOM05D004387 ORTHO05D005218 8.5e-105 384.4 330 67.3
Lju124A41T49 Lonicera japonica HOM05D004387 ORTHO05D005218 1.8e-102 376.7 330 65.8
vmacro09074 Vaccinium macrocarpon HOM05D004387 ORTHO05D005218 7.4e-101 371.3 387 58.1
Lsat_1_v5_gn_5_161440 Lactuca sativa HOM05D004387 ORTHO05D005218 6.3e-100 368.2 323 63.8
CiPaw.09G038200 Carya illinoinensis HOM05D004387 ORTHO05D005218 5.3e-99 365.2 330 64.2
Manes.08G050500 Manihot esculenta HOM05D004387 ORTHO05D005218 4.5e-98 362.1 331 63.4
COL.COLO4_28283 Corchorus olitorius HOM05D004387 ORTHO05D005218 7.7e-98 361.3 323 64.4
GSVIVG01033276001 Vitis vinifera HOM05D004387 ORTHO05D005218 7.7e-98 361.3 339 64.6
ECA248G3203 Erigeron canadensis HOM05D004387 ORTHO05D005218 1.0e-97 360.9 328 62.8
Potri.016G055600 Populus trichocarpa HOM05D004387 ORTHO05D005218 1.3e-97 360.5 331 63.4
Cc07_g20870 Coffea canephora HOM05D004387 ORTHO05D005218 2.9e-97 359.4 337 62.3
Thecc.05G153400 Theobroma cacao HOM05D004387 ORTHO05D005218 5.0e-97 358.6 330 62.1
Peaxi162Scf00354g00222 Petunia axillaris HOM05D004387 ORTHO05D005218 8.5e-97 357.8 331 63.4
Rhsim09G0155500 Rhododendron simsii HOM05D004387 ORTHO05D005218 1.1e-96 357.5 398 54.8
Cfa016818 Carpinus fangiana HOM05D004387 ORTHO05D005218 5.5e-96 355.1 331 63.4
DCAR_013603 Daucus carota HOM05D004387 ORTHO05D005218 9.4e-96 354.4 330 61.5
Potri.006G051200 Populus trichocarpa HOM05D004387 ORTHO05D005218 1.2e-95 354.0 331 63.1
Gohir.A02G158900 Gossypium hirsutum HOM05D004387 ORTHO05D005218 2.1e-95 353.2 330 62.1
CSS0027602 Camellia sinensis var. sinensis HOM05D004387 ORTHO05D005218 8.0e-95 351.3 330 63.0
Nitab4.5_0004587g0010 Nicotiana tabacum HOM05D004387 ORTHO05D005218 1.4e-94 350.5 328 62.8
QL02p103266 Quercus lobata HOM05D004387 ORTHO05D005218 1.8e-94 350.1 336 60.1
Oeu017945.1 Olea europaea HOM05D004387 ORTHO05D005218 2.3e-94 349.7 331 62.5
Duzib093G1767 Durio zibethinus HOM05D004387 ORTHO05D005218 4.0e-94 349.0 330 61.8
MELO3C023136.2 Cucumis melo HOM05D004387 ORTHO05D005218 1.1e-93 347.4 326 61.7
Actinidia38546 Actinidia chinensis HOM05D004387 ORTHO05D005218 2.6e-93 346.3 301 66.4
Sabra06G0035900 Salix brachista HOM05D004387 ORTHO05D005218 2.6e-93 346.3 344 60.2
Gohir.D01G090600 Gossypium hirsutum HOM05D004387 ORTHO05D005218 3.3e-93 345.9 330 62.1
TWI77G0383 Tripterygium wilfordii HOM05D004387 ORTHO05D005218 3.3e-93 345.9 331 61.3
Gohir.A01G009000 Gossypium hirsutum HOM05D004387 ORTHO05D005218 4.4e-93 345.5 330 61.8
Sopen10g030740 Solanum pennellii HOM05D004387 ORTHO05D005218 4.4e-93 345.5 331 61.6
CAN.G128.9 Capsicum annuum HOM05D004387 ORTHO05D005218 7.5e-93 344.7 331 61.6
Atru.chr1.1097 Acer truncatum HOM05D004387 ORTHO05D005218 2.8e-92 342.8 331 60.7
CsaV3_4G011700 Cucumis sativus L. HOM05D004387 ORTHO05D005218 3.7e-92 342.4 326 60.4
Migut.K00090 Erythranthe guttata HOM05D004387 ORTHO05D005218 8.2e-92 341.3 332 60.5
SGA_v2.0_scaffold273G46436 Striga asiatica HOM05D004387 ORTHO05D005218 8.2e-92 341.3 324 60.5
MBI11_g09466_MAGBIO Magnolia biondii HOM05D004387 ORTHO05D005218 1.1e-91 340.9 331 61.0
Solyc06g075390.4 Solanum lycopersicum HOM05D004387 ORTHO05D005218 1.4e-91 340.5 330 60.6
Lalb_Chr20g0110501 Lupinus albus HOM05D004387 ORTHO05D005218 1.8e-91 340.1 327 59.3
Prupe.7G061000 Prunus persica HOM05D004387 ORTHO05D005218 1.8e-91 340.1 326 61.0
MSTRG.10813 Avicennia marina HOM05D004387 ORTHO05D005218 3.1e-91 339.3 331 58.6
MD12G1073800 Malus domestica HOM05D004387 ORTHO05D005218 3.1e-91 339.3 330 60.3
RcHm_v2.0_Chr3g0482341 Rosa chinensis HOM05D004387 ORTHO05D005218 5.3e-91 338.6 331 60.7
TWI74G1664 Tripterygium wilfordii HOM05D004387 ORTHO05D005218 5.3e-91 338.6 331 59.8
HanXRQChr06g0178491 Helianthus annuus HOM05D004387 ORTHO05D005218 7.0e-91 338.2 317 61.2
HanXRQChr01g0008751 Helianthus annuus HOM05D004387 ORTHO05D005218 9.1e-91 337.8 318 60.4
Sopen06g031800 Solanum pennellii HOM05D004387 ORTHO05D005218 9.1e-91 337.8 328 60.7
PGSC0003DMG400007507 Solanum tuberosum HOM05D004387 ORTHO05D005218 9.1e-91 337.8 328 60.7
Sed0012804 Sechium edule HOM05D004387 ORTHO05D005218 1.2e-90 337.4 325 59.7
CAN.G1001.5 Capsicum annuum HOM05D004387 ORTHO05D005218 1.6e-90 337.0 331 60.4
Hund05284 Selenicereus undatus HOM05D004387 ORTHO05D005218 2.0e-90 336.7 330 59.7
SGA_v2.0_scaffold94G28486 Striga asiatica HOM05D004387 ORTHO05D005218 2.7e-90 336.3 323 60.1
Lalb_Chr01g0017301 Lupinus albus HOM05D004387 ORTHO05D005218 7.7e-90 334.7 327 60.2
TAR633G2397 Trochodendron aralioides HOM05D004387 ORTHO05D005218 7.7e-90 334.7 331 58.9
Glyma.08G246800 Glycine max HOM05D004387 ORTHO05D005218 1.3e-89 334.0 327 59.6
Ciclev10005512m.g Citrus clementina HOM05D004387 ORTHO05D005218 2.9e-89 332.8 331 59.8
Aqoxy5G00267 Aquilegia oxysepala HOM05D004387 ORTHO05D005218 3.8e-89 332.4 332 58.7
Cfa006454 Carpinus fangiana HOM05D004387 ORTHO05D005218 3.8e-89 332.4 299 63.2
CANSAT21G1698 Cannabis sativa HOM05D004387 ORTHO05D005218 2.5e-88 329.7 327 60.6
FvH4_6g23810 Fragaria vesca HOM05D004387 ORTHO05D005218 8.0e-87 324.7 331 59.2
Eucgr.A00059 Eucalyptus grandis HOM05D004387 ORTHO05D005218 1.0e-86 324.3 331 56.8
Psat6g037480 Pisum sativum HOM05D004387 ORTHO05D005218 1.0e-86 324.3 327 57.2
Nitab4.5_0009442g0010 Nicotiana tabacum HOM05D004387 ORTHO05D005218 1.4e-86 323.9 328 59.8
Phvul.011G181200 Phaseolus vulgaris HOM05D004387 ORTHO05D005218 6.8e-86 321.6 327 57.8
Lj6g0019382 Lotus japonicus HOM05D004387 ORTHO05D005218 8.8e-86 321.2 330 59.1
Glyma.14G145600 Glycine max HOM05D004387 ORTHO05D005218 1.5e-85 320.5 327 57.8
VMungo0331G1303 Vigna mungo HOM05D004387 ORTHO05D005218 3.4e-85 319.3 327 56.3
TPR.G24500 Trifolium pratense HOM05D004387 ORTHO05D005218 4.4e-85 318.9 327 56.6
FAN02G2904 Fragaria x ananassa HOM05D004387 ORTHO05D005218 5.7e-85 318.5 352 55.4
Medtr1g007060 Medicago truncatula HOM05D004387 ORTHO05D005218 7.5e-85 318.2 325 57.5
FAN05G1657 Fragaria x ananassa HOM05D004387 ORTHO05D005218 1.3e-84 317.4 352 55.4
Ca_03365_v3 Cicer arietinum L. HOM05D004387 ORTHO05D005218 3.7e-84 315.8 321 58.3
Gorai.002G116000 Gossypium raimondii HOM05D004387 ORTHO05D005218 3.7e-84 315.8 333 58.9
Cpa.g.sc3.336 Carica papaya HOM05D004387 ORTHO05D005218 1.1e-83 314.3 330 57.3
FAN14G1242 Fragaria x ananassa HOM05D004387 ORTHO05D005218 4.1e-83 312.4 344 55.5
Ah.13g076470 Amaranthus hybridus HOM05D004387 ORTHO05D005218 1.6e-82 310.5 348 53.7
PSO357G0544 Papaver somniferum HOM05D004387 ORTHO05D005218 1.6e-82 310.5 328 54.9
PSO170G6628 Papaver somniferum HOM05D004387 ORTHO05D005218 3.5e-82 309.3 328 54.9
Aqoxy2G02875 Aquilegia oxysepala HOM05D004387 ORTHO05D005218 8.5e-81 304.7 332 55.1
CARHR052860 Cardamine hirsuta HOM05D004387 ORTHO05D005218 4.2e-80 302.4 325 53.8
AUR62024448 Chenopodium quinoa HOM05D004387 ORTHO05D005218 4.2e-80 302.4 305 57.7
PGR142G2016 Punica granatum HOM05D004387 ORTHO05D005218 4.2e-80 302.4 336 55.1
HPP92_019752 Vanilla planifolia HOM05D004387 ORTHO05D005218 1.0e-78 297.7 322 53.4
AT1G60080 Arabidopsis thaliana HOM05D004387 ORTHO05D005218 3.0e-78 296.2 325 53.5
FAN09G3586 Fragaria x ananassa HOM05D004387 ORTHO05D005218 5.2e-78 295.4 343 53.6
Aa31LG2G10160 Aethionema arabicum HOM05D004387 ORTHO05D005218 8.8e-78 294.7 324 55.2
THA.LOC104823663 Tarenaya hassleriana HOM05D004387 ORTHO05D005218 1.2e-77 294.3 327 52.9
AL2G16570 Arabidopsis lyrata HOM05D004387 ORTHO05D005218 1.3e-76 290.8 325 52.0
Lj4g0008518 Lotus japonicus HOM05D004387 ORTHO05D005218 3.7e-76 289.3 330 53.9
Sp2g04520 Schrenkiella parvula HOM05D004387 ORTHO05D005218 3.7e-76 289.3 327 53.5
AUR62026038 Chenopodium quinoa HOM05D004387 ORTHO05D005218 1.1e-75 287.7 331 52.6
Thhalv10023611m.g Eutrema salsugineum HOM05D004387 ORTHO05D005218 2.4e-75 286.6 325 52.3
Carub.0002s0514 Capsella rubella HOM05D004387 ORTHO05D005218 4.5e-74 282.3 325 51.4
BraA09t37397Z Brassica rapa HOM05D004387 ORTHO05D005218 1.3e-73 280.8 324 52.2
BNapus_Darmor_BZH_scaffold_155p00060 Brassica napus HOM05D004387 ORTHO05D005218 1.7e-73 280.4 324 52.2
C09p22030 Brassica napus HOM05D004387 ORTHO05D005218 1.7e-73 280.4 324 52.2
BolC9t55109H Brassica oleracea HOM05D004387 ORTHO05D005218 1.7e-73 280.4 324 52.2
BcaB07g31201 Brassica carinata HOM05D004387 ORTHO05D005218 2.9e-73 279.6 324 51.9
A09p17690 Brassica napus HOM05D004387 ORTHO05D005218 2.9e-73 279.6 324 51.9
BcaC04g22217 Brassica carinata HOM05D004387 ORTHO05D005218 5.0e-73 278.9 324 51.9
Nn2g15223 Nelumbo nucifera HOM05D004387 ORTHO05D005218 1.1e-72 277.7 330 51.8
arahy.Tifrunner.gnm1.ann1.QD816I Arachis hypogaea HOM05D004387 ORTHO05D005218 3.3e-72 276.2 334 52.4
arahy.Tifrunner.gnm1.ann1.02RJAW Arachis hypogaea HOM05D004387 ORTHO05D005218 4.3e-72 275.8 334 52.1
Hma1.2p1_0953F.1_g241060 Hydrangea macrophylla HOM05D004387 ORTHO05D005218 3.0e-70 269.6 260 61.5
PGSC0003DMG400023725 Solanum tuberosum HOM05D004387 ORTHO05D005218 2.0e-69 266.9 278 59.4
EL10Ac3g07090 Beta vulgaris HOM05D004387 ORTHO05D005218 1.1e-67 261.2 338 49.4
ATR0626G351 Amborella trichopoda HOM05D004387 ORTHO05D005218 5.9e-66 255.4 325 47.1
CDE04G2438 Ceratophyllum demersum HOM05D004387 ORTHO05D005218 1.0e-65 254.6 295 49.5
Gorai.002G010400 Gossypium raimondii HOM05D004387 ORTHO05D005218 1.3e-65 254.2 290 55.9
Nitab4.5_0005483g0010 Nicotiana tabacum HOM05D004387 ORTHO05D005218 1.9e-64 250.4 330 49.7
Gohir.D01G008666 Gossypium hirsutum HOM05D004387 ORTHO05D005218 5.6e-64 248.8 259 58.7
Os11g0311300 Oryza sativa ssp. japonica HOM05D004387 ORTHO05D005218 5.2e-62 242.3 308 47.4
Eucgr.A00069 Eucalyptus grandis HOM05D004387 ORTHO05D005218 1.2e-61 241.1 347 48.4
Eucgr.A00063 Eucalyptus grandis HOM05D004387 ORTHO05D005218 3.7e-60 236.1 295 52.2
Zm00001eb175450 Zea mays HOM05D004387 ORTHO05D005218 8.3e-60 235.0 320 44.1
Eucgr.A00267 Eucalyptus grandis HOM05D004387 ORTHO05D005218 1.4e-59 234.2 337 47.8
Eucgr.A00265 Eucalyptus grandis HOM05D004387 ORTHO05D005218 1.0e-57 228.0 264 53.0
Mapoly0071s0030 Marchantia polymorpha HOM05D004387 ORTHO05D005218 5.0e-57 225.7 340 43.5
Pp3c19_14820 Physcomitrium patens HOM05D004387 ORTHO05D005218 7.5e-53 211.8 327 37.9
Haze_19856 Corylus avellana HOM05D004387 ORTHO05D005218 4.9e-52 209.1 322 45.7
Sc13g0001760 Simmondsia chinensis HOM05D004387 ORTHO05D005218 7.1e-51 205.3 233 54.5
Eucgr.A00266 Eucalyptus grandis HOM05D004387 ORTHO05D005218 1.2e-50 204.5 331 45.3
ClCG04G000130 Citrullus lanatus HOM05D004387 ORTHO05D005218 2.7e-50 203.4 148 70.3
Glyma.18G267600 Glycine max HOM05D004387 ORTHO05D005218 3.0e-49 199.9 229 53.7
CSS0026699 Camellia sinensis var. sinensis HOM05D004387 ORTHO05D005218 1.2e-47 194.5 154 74.7
CSS0001525 Camellia sinensis var. sinensis HOM05D004387 ORTHO05D005218 8.1e-47 191.8 169 65.7
Cc06_g17110 Coffea canephora HOM05D004387 ORTHO05D005218 1.8e-46 190.7 200 61.0
SMO169G0201 Selaginella moellendorffii HOM05D004387 ORTHO05D005218 8.9e-46 188.3 314 37.6
Zm00001eb036840 Zea mays HOM05D004387 ORTHO05D005218 6.4e-44 182.2 327 39.8
Cc06_g17120 Coffea canephora HOM05D004387 ORTHO05D005218 7.8e-42 175.3 118 72.0
Solyc10g080130.3 Solanum lycopersicum HOM05D004387 ORTHO05D005218 7.8e-42 175.3 200 55.5
ClCG04G000120 Citrullus lanatus HOM05D004387 ORTHO05D005218 7.3e-40 168.7 129 70.5
Gohir.D01G090850 Gossypium hirsutum HOM05D004387 ORTHO05D005218 9.6e-40 168.3 153 60.1
Eucgr.A00263 Eucalyptus grandis HOM05D004387 ORTHO05D005218 3.6e-39 166.4 200 52.0
CSS0046204 Camellia sinensis var. sinensis HOM05D004387 ORTHO05D005218 1.7e-36 157.5 199 52.8
unitig_46.g18442 Utricularia gibba HOM05D004387 ORTHO05D005218 1.1e-32 144.8 147 53.1
unitig_46.g18443 Utricularia gibba HOM05D004387 ORTHO05D005218 5.6e-32 142.5 193 48.7
Zm00001eb317600 Zea mays HOM05D004387 ORTHO05D005218 1.8e-30 137.5 117 57.3
SEGI_29832 Sequoiadendron giganteum HOM05D004387 ORTHO05D005218 3.1e-30 136.7 120 57.5
Sc13g0001750 Simmondsia chinensis HOM05D004387 ORTHO05D005218 2.2e-28 130.6 91 71.4
Gohir.D01G090350 Gossypium hirsutum HOM05D004387 ORTHO05D005218 1.1e-27 128.3 95 68.4
SEGI_27972 Sequoiadendron giganteum HOM05D004387 ORTHO05D005218 6.7e-25 119.0 142 50.7
Zm00001eb161840 Zea mays HOM05D004387 ORTHO05D005218 6.7e-25 119.0 118 51.7
EL10Ac3g05398 Beta vulgaris HOM05D004387 ORTHO05D005218 8.1e-23 112.1 178 41.6
Cre10.g440900 Chlamydomonas reinhardtii HOM05D004387 ORTHO05D005218 2.0e-21 107.5 338 26.9
BcaC09g49432 Brassica carinata HOM05D004387 ORTHO05D005218 2.2e-20 104.0 132 49.2
C01p36790 Brassica napus HOM05D004387 ORTHO05D005218 2.2e-20 104.0 101 59.4
BolC1t03637H Brassica oleracea HOM05D004387 ORTHO05D005218 2.2e-20 104.0 101 59.4
CBR_g20981 Chara braunii HOM05D004387 ORTHO05D005218 7.1e-19 99.0 396 26.3
Haze_01634 Corylus avellana HOM05D004387 ORTHO05D005218 2.5e-16 90.5 70 67.1
AagrBONN_evm.TU.Sc2ySwM_362.2801 Anthoceros agrestis HOM05D004387 ORTHO05D005218 4.3e-16 89.7 221 29.4
Nn7g36292 Nelumbo nucifera HOM05D004387 ORTHO05D005218 3.5e-10 70.1 70 52.9
MCO07G362 Micromonas commoda HOM05D004387 ORTHO05D005218 7.4e-08 62.4 254 22.4
BraA01t04366Z Brassica rapa HOM05D002238 ORTHO05D001984 4.8e-07 59.7 301 26.6
BcaB04g21272 Brassica carinata HOM05D002238 ORTHO05D001984 1.8e-06 57.8 295 26.8
BolC1t05536H Brassica oleracea HOM05D002238 ORTHO05D001984 1.8e-06 57.8 288 27.1
CBR_g41407 Chara braunii HOM05D004387 ORTHO05D005218 1.8e-06 57.8 405 22.2
Dinv26619 Davidia involucrata HOM05D002238 ORTHO05D001984 1.8e-06 57.8 131 29.0
Zm00001eb228810 Zea mays HOM05D002238 ORTHO05D001984 2.4e-06 57.4 297 23.6
A05p40470 Brassica napus HOM05D002238 ORTHO05D001984 3.1e-06 57.0 303 26.7
Potri.014G166200 Populus trichocarpa HOM05D002238 ORTHO05D001984 3.1e-06 57.0 309 25.2
Zm00001eb228830 Zea mays HOM05D002238 ORTHO05D001984 3.1e-06 57.0 297 23.6
C05p59570 Brassica napus HOM05D002238 ORTHO05D001984 5.3e-06 56.2 302 26.5
CSS0035678 Camellia sinensis var. sinensis HOM05D002238 ORTHO05D001984 5.3e-06 56.2 306 24.2
CSS0015125 Camellia sinensis var. sinensis HOM05D002238 ORTHO05D001984 6.9e-06 55.8 313 24.3
CDE07G0852 Ceratophyllum demersum HOM05D004387 ORTHO05D005218 6.9e-06 55.8 45 57.8
Hma1.2p1_0017F.1_g011480 Hydrangea macrophylla HOM05D002238 ORTHO05D001984 6.9e-06 55.8 306 25.8


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