Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0024385 Camellia sinensis var. sinensis HOM05D004944 ORTHO05D005989 1.7e-63 245.7 119 100.0
Dinv32057 Davidia involucrata HOM05D004944 ORTHO05D005989 3.1e-28 128.6 91 72.5
Actinidia06272 Actinidia chinensis HOM05D004944 ORTHO05D005989 1.0e-26 123.6 91 71.4
GSVIVG01000850001 Vitis vinifera HOM05D004944 ORTHO05D005989 1.3e-26 123.2 91 70.3
MD02G1296200 Malus domestica HOM05D004944 ORTHO05D005989 2.2e-26 122.5 91 69.2
Hma1.2p1_0184F.1_g081120 Hydrangea macrophylla HOM05D004944 ORTHO05D005989 2.9e-26 122.1 91 69.2
ClCG05G020810 Citrullus lanatus HOM05D004944 ORTHO05D005989 5.0e-26 121.3 91 68.1
Prupe.2G028500 Prunus persica HOM05D004944 ORTHO05D005989 6.5e-26 120.9 91 69.2
MD07G1077800 Malus domestica HOM05D004944 ORTHO05D005989 1.9e-25 119.4 91 68.1
TAR636G1724 Trochodendron aralioides HOM05D004944 ORTHO05D005989 2.5e-25 119.0 91 65.9
CiPaw.13G010200 Carya illinoinensis HOM05D004944 ORTHO05D005989 5.5e-25 117.9 91 67.0
Migut.N01817 Erythranthe guttata HOM05D004944 ORTHO05D005989 5.5e-25 117.9 91 67.0
Lj3g0016020 Lotus japonicus HOM05D004944 ORTHO05D005989 5.5e-25 117.9 91 68.1
CsaV3_5G036480 Cucumis sativus L. HOM05D004944 ORTHO05D005989 1.2e-24 116.7 91 64.8
MELO3C012446.2 Cucumis melo HOM05D004944 ORTHO05D005989 2.1e-24 115.9 91 64.8
Lsat_1_v5_gn_9_47141 Lactuca sativa HOM05D004944 ORTHO05D005989 2.7e-24 115.5 91 63.7
Lalb_Chr04g0263921 Lupinus albus HOM05D004944 ORTHO05D005989 3.5e-24 115.2 91 65.9
Medtr3g022850 Medicago truncatula HOM05D004944 ORTHO05D005989 6.1e-24 114.4 91 67.0
arahy.Tifrunner.gnm1.ann1.L5CKR4 Arachis hypogaea HOM05D004944 ORTHO05D005989 7.9e-24 114.0 91 67.0
arahy.Tifrunner.gnm1.ann1.YV81B1 Arachis hypogaea HOM05D004944 ORTHO05D005989 7.9e-24 114.0 91 67.0
FAN03G3505 Fragaria x ananassa HOM05D004944 ORTHO05D005989 7.9e-24 114.0 92 65.2
RcHm_v2.0_Chr1g0319541 Rosa chinensis HOM05D004944 ORTHO05D005989 7.9e-24 114.0 92 65.2
Sed0005559 Sechium edule HOM05D004944 ORTHO05D005989 7.9e-24 114.0 91 63.7
ECA232G0518 Erigeron canadensis HOM05D004944 ORTHO05D005989 1.3e-23 113.2 91 62.6
SalBow2G1212 Salvia bowleyana HOM05D004944 ORTHO05D005989 1.3e-23 113.2 94 64.9
VMungo1080G1012 Vigna mungo HOM05D004944 ORTHO05D005989 1.3e-23 113.2 91 65.9
Cfa010847 Carpinus fangiana HOM05D004944 ORTHO05D005989 5.1e-23 111.3 97 62.9
FAN01G0470 Fragaria x ananassa HOM05D004944 ORTHO05D005989 5.1e-23 111.3 92 63.0
THA.LOC104819120 Tarenaya hassleriana HOM05D004944 ORTHO05D005989 5.1e-23 111.3 90 64.4
Glyma.11G150100 Glycine max HOM05D004944 ORTHO05D005989 6.7e-23 110.9 91 65.9
Nn7g36468 Nelumbo nucifera HOM05D004944 ORTHO05D005989 8.7e-23 110.5 91 62.6
CAN.G410.46 Capsicum annuum HOM05D004944 ORTHO05D005989 1.1e-22 110.2 91 63.7
Nitab4.5_0000316g0180 Nicotiana tabacum HOM05D004944 ORTHO05D005989 1.1e-22 110.2 91 63.7
Nitab4.5_0006307g0060 Nicotiana tabacum HOM05D004944 ORTHO05D005989 1.1e-22 110.2 91 63.7
Thhalv10024629m.g Eutrema salsugineum HOM05D004944 ORTHO05D005989 1.5e-22 109.8 90 65.6
FvH4_7g02220 Fragaria vesca HOM05D004944 ORTHO05D005989 1.5e-22 109.8 92 63.0
Solyc01g068340.3 Solanum lycopersicum HOM05D004944 ORTHO05D005989 1.5e-22 109.8 99 56.6
Haze_03113 Corylus avellana HOM05D004944 ORTHO05D005989 1.9e-22 109.4 91 63.7
Duzib128G1953 Durio zibethinus HOM05D004944 ORTHO05D005989 1.9e-22 109.4 91 61.5
HanXRQChr05g0145061 Helianthus annuus HOM05D004944 ORTHO05D005989 1.9e-22 109.4 91 61.5
SGA_v2.0_scaffold5G02935 Striga asiatica HOM05D004944 ORTHO05D005989 1.9e-22 109.4 90 65.6
Cc02_g29470 Coffea canephora HOM05D004944 ORTHO05D005989 2.5e-22 109.0 91 61.5
Rhsim07G0062200 Rhododendron simsii HOM05D004944 ORTHO05D005989 2.5e-22 109.0 102 62.7
Hund15708 Selenicereus undatus HOM05D004944 ORTHO05D005989 2.5e-22 109.0 91 61.5
Aa31LG2G19510 Aethionema arabicum HOM05D004944 ORTHO05D005989 3.3e-22 108.6 90 62.2
Aqoxy1G00293 Aquilegia oxysepala HOM05D004944 ORTHO05D005989 3.3e-22 108.6 90 64.4
Thecc.10G005400 Theobroma cacao HOM05D004944 ORTHO05D005989 3.3e-22 108.6 91 62.6
BcaB01g01761 Brassica carinata HOM05D004944 ORTHO05D005989 4.3e-22 108.2 90 64.4
BcaC04g21249 Brassica carinata HOM05D004944 ORTHO05D005989 4.3e-22 108.2 90 64.4
A09p26720 Brassica napus HOM05D004944 ORTHO05D005989 4.3e-22 108.2 90 64.4
C09p33850 Brassica napus HOM05D004944 ORTHO05D005989 4.3e-22 108.2 90 64.4
BolC9t56223H Brassica oleracea HOM05D004944 ORTHO05D005989 4.3e-22 108.2 90 64.4
BraA09t38244Z Brassica rapa HOM05D004944 ORTHO05D005989 4.3e-22 108.2 90 64.4
MBI17_g24522_MAGBIO Magnolia biondii HOM05D004944 ORTHO05D005989 4.3e-22 108.2 91 63.7
QL04p013327 Quercus lobata HOM05D004944 ORTHO05D005989 4.3e-22 108.2 90 63.3
RcHm_v2.0_Chr3g0488831 Rosa chinensis HOM05D004944 ORTHO05D005989 5.7e-22 107.8 90 62.2
Sopen01g030310 Solanum pennellii HOM05D004944 ORTHO05D005989 7.4e-22 107.5 91 60.4
Ciclev10030882m.g Citrus clementina HOM05D004944 ORTHO05D005989 1.3e-21 106.7 91 61.5
FAN06G2455 Fragaria x ananassa HOM05D004944 ORTHO05D005989 1.3e-21 106.7 92 62.0
Gohir.A13G013200 Gossypium hirsutum HOM05D004944 ORTHO05D005989 1.3e-21 106.7 91 60.4
Atru.chr11.2502 Acer truncatum HOM05D004944 ORTHO05D005989 1.6e-21 106.3 91 61.5
Gorai.013G015500 Gossypium raimondii HOM05D004944 ORTHO05D005989 2.2e-21 105.9 91 59.3
Prupe.7G020900 Prunus persica HOM05D004944 ORTHO05D005989 2.2e-21 105.9 52 92.3
vmacro13723 Vaccinium macrocarpon HOM05D004944 ORTHO05D005989 2.2e-21 105.9 92 63.0
AT4G30870 Arabidopsis thaliana HOM05D004944 ORTHO05D005989 2.8e-21 105.5 90 62.2
CARHR238770 Cardamine hirsuta HOM05D004944 ORTHO05D005989 4.8e-21 104.8 90 60.0
AL7G21230 Arabidopsis lyrata HOM05D004944 ORTHO05D005989 6.3e-21 104.4 90 61.1
Sabra03G0149500 Salix brachista HOM05D004944 ORTHO05D005989 6.3e-21 104.4 91 62.6
PSO782G0837 Papaver somniferum HOM05D004944 ORTHO05D005989 8.2e-21 104.0 91 59.3
Sp6g04870 Schrenkiella parvula HOM05D004944 ORTHO05D005989 8.2e-21 104.0 90 62.2
COL.COLO4_25841 Corchorus olitorius HOM05D004944 ORTHO05D005989 1.1e-20 103.6 91 59.3
Gohir.D13G014300 Gossypium hirsutum HOM05D004944 ORTHO05D005989 1.1e-20 103.6 91 59.3
CANSAT80G2771 Cannabis sativa HOM05D004944 ORTHO05D005989 1.4e-20 103.2 91 60.4
TWI15G1108 Tripterygium wilfordii HOM05D004944 ORTHO05D005989 1.4e-20 103.2 89 61.8
Cfa010848 Carpinus fangiana HOM05D004944 ORTHO05D005989 1.8e-20 102.8 97 59.8
Carub.0007s0968 Capsella rubella HOM05D004944 ORTHO05D005989 2.4e-20 102.4 90 62.2
Cpa.g.sc197.13 Carica papaya HOM05D004944 ORTHO05D005989 2.4e-20 102.4 55 87.3
Lj9A645G79 Lonicera japonica HOM05D004944 ORTHO05D005989 2.4e-20 102.4 52 86.5
Potri.003G202300 Populus trichocarpa HOM05D004944 ORTHO05D005989 4.1e-20 101.7 91 62.6
EL10Ac2g02867 Beta vulgaris HOM05D004944 ORTHO05D005989 1.2e-19 100.1 87 60.9
PGR031G0610 Punica granatum HOM05D004944 ORTHO05D005989 1.5e-19 99.8 91 57.1
AUR62026814 Chenopodium quinoa HOM05D004944 ORTHO05D005989 2.0e-19 99.4 90 60.0
AUR62037239 Chenopodium quinoa HOM05D004944 ORTHO05D005989 2.0e-19 99.4 90 60.0
Sc10g0004240 Simmondsia chinensis HOM05D004944 ORTHO05D005989 5.9e-19 97.8 52 84.6
DCAR_009210 Daucus carota HOM05D004944 ORTHO05D005989 7.7e-19 97.4 75 65.3
Eucgr.G03259 Eucalyptus grandis HOM05D004944 ORTHO05D005989 7.7e-19 97.4 91 54.9
MBI17_g33308_MAGBIO Magnolia biondii HOM05D004944 ORTHO05D005989 7.7e-19 97.4 52 86.5
BcaNung04417 Brassica carinata HOM05D000343 ORTHO05D003187 1.0e-18 97.1 86 58.1
PSO135G0630 Papaver somniferum HOM05D004944 ORTHO05D005989 1.7e-18 96.3 91 52.7
SHI03976 Sapria himalayana HOM05D004944 ORTHO05D005989 1.7e-18 96.3 55 74.5
SEGI_11905 Sequoiadendron giganteum HOM05D004944 ORTHO05D005989 2.2e-18 95.9 88 52.3
CDE01G0132 Ceratophyllum demersum HOM05D004944 ORTHO05D005989 2.9e-18 95.5 91 53.8
Peaxi162Scf00309g00011 Petunia axillaris HOM05D004944 ORTHO05D005989 6.5e-18 94.4 54 77.8
Thhalv10024809m.g Eutrema salsugineum HOM05D004944 ORTHO05D005989 8.5e-18 94.0 86 58.1
PSO339G0509 Papaver somniferum HOM05D004944 ORTHO05D005989 8.5e-18 94.0 92 54.3
HPP92_001459 Vanilla planifolia HOM05D004944 ORTHO05D005989 8.5e-18 94.0 90 55.6
Carub.0007s3598 Capsella rubella HOM05D004944 ORTHO05D005989 1.1e-17 93.6 88 55.7
PSO384G2132 Papaver somniferum HOM05D004944 ORTHO05D005989 4.2e-17 91.7 91 53.8
Manes.04G164000 Manihot esculenta HOM05D004944 ORTHO05D005989 2.1e-16 89.4 91 56.0
Os01g0948100 Oryza sativa ssp. japonica HOM05D004944 ORTHO05D005989 2.1e-16 89.4 89 51.7
Zm00001eb141350 Zea mays HOM05D004944 ORTHO05D005989 2.1e-16 89.4 88 52.3
Mapoly0005s0161 Marchantia polymorpha HOM05D004944 ORTHO05D005989 3.9e-15 85.1 91 47.3
Zm00001eb141330 Zea mays HOM05D004944 ORTHO05D005989 2.5e-14 82.4 90 51.1
Pp3c16_12330 Physcomitrium patens HOM05D004944 ORTHO05D005989 4.3e-14 81.6 87 48.3
AagrBONN_evm.TU.Sc2ySwM_228.3522 Anthoceros agrestis HOM05D004944 ORTHO05D005989 1.1e-12 77.0 51 68.6
CBR_g44528 Chara braunii HOM05D004944 ORTHO05D005989 1.1e-12 77.0 71 52.1
SMO337G0105 Selaginella moellendorffii HOM05D004944 ORTHO05D005989 1.0e-10 70.5 84 44.0
AT5G39770 Arabidopsis thaliana HOM05D004944 ORTHO05D005989 4.2e-09 65.1 38 76.3
TPR.G18800 Trifolium pratense HOM05D004944 ORTHO05D005989 2.3e-07 59.3 57 59.6
PRCOL_00004679 Prasinoderma coloniale HOM05D004944 ORTHO05D005989 5.1e-07 58.2 114 36.8
Haze_26725 Corylus avellana HOM05D004944 ORTHO05D005989 2.6e-06 55.8 56 48.2


User provided reference genes

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