Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0023992 Camellia sinensis var. sinensis HOM05D004511 ORTHO05D005348 1.2e-82 309.7 146 100.0
CSS0045058 Camellia sinensis var. sinensis HOM05D004511 ORTHO05D005348 7.3e-80 300.4 146 97.9
Cc03_g06420 Coffea canephora HOM05D004511 ORTHO05D005348 3.3e-32 142.1 81 81.5
Prupe.1G050200 Prunus persica HOM05D004511 ORTHO05D005348 4.3e-32 141.7 81 81.5
MSTRG.9851 Avicennia marina HOM05D004511 ORTHO05D005348 5.7e-32 141.4 81 81.5
FvH4_4g05000 Fragaria vesca HOM05D004511 ORTHO05D005348 5.7e-32 141.4 81 80.2
SGA_v2.0_scaffold67G22677 Striga asiatica HOM05D004511 ORTHO05D005348 7.4e-32 141.0 81 80.2
Migut.G00563 Erythranthe guttata HOM05D004511 ORTHO05D005348 9.7e-32 140.6 81 80.2
Lalb_Chr02g0150721 Lupinus albus HOM05D004511 ORTHO05D005348 1.3e-31 140.2 81 80.2
MD13G1223200 Malus domestica HOM05D004511 ORTHO05D005348 1.7e-31 139.8 81 80.2
Potri.010G065000 Populus trichocarpa HOM05D004511 ORTHO05D005348 1.7e-31 139.8 78 83.3
GSVIVG01027931001 Vitis vinifera HOM05D004511 ORTHO05D005348 2.8e-31 139.0 78 83.3
arahy.Tifrunner.gnm1.ann1.QET6JI Arachis hypogaea HOM05D004511 ORTHO05D005348 3.7e-31 138.7 81 77.8
Actinidia27093 Actinidia chinensis HOM05D004511 ORTHO05D005348 4.8e-31 138.3 78 82.1
arahy.Tifrunner.gnm1.ann1.Z900IQ Arachis hypogaea HOM05D004511 ORTHO05D005348 4.8e-31 138.3 81 77.8
FAN12G0867 Fragaria x ananassa HOM05D004511 ORTHO05D005348 4.8e-31 138.3 81 79.0
PGR004G0717 Punica granatum HOM05D004511 ORTHO05D005348 4.8e-31 138.3 78 82.1
Sc11g0002730 Simmondsia chinensis HOM05D004511 ORTHO05D005348 4.8e-31 138.3 81 76.5
CANSAT78G2334 Cannabis sativa HOM05D004511 ORTHO05D005348 6.3e-31 137.9 78 80.8
Nitab4.5_0005154g0040 Nicotiana tabacum HOM05D004511 ORTHO05D005348 8.2e-31 137.5 81 77.8
vmacro08561 Vaccinium macrocarpon HOM05D004511 ORTHO05D005348 8.2e-31 137.5 78 80.8
AL3G39770 Arabidopsis lyrata HOM05D004511 ORTHO05D005348 1.1e-30 137.1 106 62.3
Ca_11884_v3 Cicer arietinum L. HOM05D004511 ORTHO05D005348 1.1e-30 137.1 76 82.9
Hund00475 Selenicereus undatus HOM05D004511 ORTHO05D005348 1.1e-30 137.1 78 80.8
THA.LOC104821629 Tarenaya hassleriana HOM05D004511 ORTHO05D005348 1.4e-30 136.7 78 80.8
Ciclev10004190m.g Citrus clementina HOM05D004511 ORTHO05D005348 1.8e-30 136.3 78 80.8
Nitab4.5_0001041g0180 Nicotiana tabacum HOM05D004511 ORTHO05D005348 1.8e-30 136.3 81 76.5
Thecc.04G266800 Theobroma cacao HOM05D004511 ORTHO05D005348 1.8e-30 136.3 78 83.3
TWI73G0808 Tripterygium wilfordii HOM05D004511 ORTHO05D005348 1.8e-30 136.3 81 76.5
ClCG05G003940 Citrullus lanatus HOM05D004511 ORTHO05D005348 2.4e-30 136.0 81 77.8
Dinv29796 Davidia involucrata HOM05D004511 ORTHO05D005348 2.4e-30 136.0 78 82.1
RcHm_v2.0_Chr4g0395811 Rosa chinensis HOM05D004511 ORTHO05D005348 2.4e-30 136.0 81 79.0
A07p07990 Brassica napus HOM05D004511 ORTHO05D005348 3.1e-30 135.6 81 75.3
BraA07t28586Z Brassica rapa HOM05D004511 ORTHO05D005348 3.1e-30 135.6 81 75.3
Carub.0003s2466 Capsella rubella HOM05D004511 ORTHO05D005348 3.1e-30 135.6 78 79.5
COL.COLO4_15984 Corchorus olitorius HOM05D004511 ORTHO05D005348 3.1e-30 135.6 93 73.1
ECA248G2418 Erigeron canadensis HOM05D004511 ORTHO05D005348 4.1e-30 135.2 81 74.1
Sp3g22130 Schrenkiella parvula HOM05D004511 ORTHO05D005348 4.1e-30 135.2 78 78.2
Sed0014740 Sechium edule HOM05D004511 ORTHO05D005348 4.1e-30 135.2 81 75.3
Aa31LG8G11050 Aethionema arabicum HOM05D004511 ORTHO05D005348 5.3e-30 134.8 78 79.5
CiPaw.01G177000 Carya illinoinensis HOM05D004511 ORTHO05D005348 5.3e-30 134.8 78 80.8
Duzib151G0197 Durio zibethinus HOM05D004511 ORTHO05D005348 5.3e-30 134.8 78 82.1
Lj6g0021678 Lotus japonicus HOM05D004511 ORTHO05D005348 5.3e-30 134.8 78 78.2
DCAR_027355 Daucus carota HOM05D004511 ORTHO05D005348 6.9e-30 134.4 78 76.9
Eucgr.H02905 Eucalyptus grandis HOM05D004511 ORTHO05D005348 6.9e-30 134.4 81 79.0
Thhalv10002376m.g Eutrema salsugineum HOM05D004511 ORTHO05D005348 6.9e-30 134.4 78 76.9
Nn1g02989 Nelumbo nucifera HOM05D004511 ORTHO05D005348 6.9e-30 134.4 78 78.2
QL06p021350 Quercus lobata HOM05D004511 ORTHO05D005348 6.9e-30 134.4 78 82.1
AUR62016594 Chenopodium quinoa HOM05D004511 ORTHO05D005348 9.1e-30 134.0 65 89.2
Glyma.20G073500 Glycine max HOM05D004511 ORTHO05D005348 9.1e-30 134.0 78 79.5
PSO210G5810 Papaver somniferum HOM05D004511 ORTHO05D005348 9.1e-30 134.0 78 78.2
TAR365G1143 Trochodendron aralioides HOM05D004511 ORTHO05D005348 9.1e-30 134.0 78 78.2
Ah.01g020260 Amaranthus hybridus HOM05D004511 ORTHO05D005348 1.2e-29 133.7 78 78.2
BcaC06g35683 Brassica carinata HOM05D004511 ORTHO05D005348 1.2e-29 133.7 78 78.2
C07p12050 Brassica napus HOM05D004511 ORTHO05D005348 1.2e-29 133.7 78 78.2
BolC7t41673H Brassica oleracea HOM05D004511 ORTHO05D005348 1.2e-29 133.7 78 78.2
CARHR100420 Cardamine hirsuta HOM05D004511 ORTHO05D005348 1.2e-29 133.7 78 76.9
Glyma.10G130700 Glycine max HOM05D004511 ORTHO05D005348 1.2e-29 133.7 81 76.5
Gohir.A09G230900 Gossypium hirsutum HOM05D004511 ORTHO05D005348 1.2e-29 133.7 81 79.0
Gorai.006G254800 Gossypium raimondii HOM05D004511 ORTHO05D005348 1.2e-29 133.7 81 79.0
Haze_11474 Corylus avellana HOM05D004511 ORTHO05D005348 1.5e-29 133.3 65 87.7
Sopen09g033830 Solanum pennellii HOM05D004511 ORTHO05D005348 1.5e-29 133.3 81 77.8
Aqoxy5G00136 Aquilegia oxysepala HOM05D004511 ORTHO05D005348 2.0e-29 132.9 78 75.6
AT3G24320 Arabidopsis thaliana HOM05D004511 ORTHO05D005348 2.6e-29 132.5 78 75.6
PSO170G1037 Papaver somniferum HOM05D004511 ORTHO05D005348 2.6e-29 132.5 78 76.9
Rhsim04G0171100 Rhododendron simsii HOM05D004511 ORTHO05D005348 2.6e-29 132.5 78 80.8
BcaB06g26614 Brassica carinata HOM05D004511 ORTHO05D005348 3.4e-29 132.1 78 76.9
AUR62011461 Chenopodium quinoa HOM05D004511 ORTHO05D005348 5.9e-29 131.3 78 76.9
Solyc09g090870.3 Solanum lycopersicum HOM05D004511 ORTHO05D005348 5.9e-29 131.3 81 76.5
CsaV3_3G011610 Cucumis sativus L. HOM05D004511 ORTHO05D005348 7.7e-29 131.0 81 76.5
Gohir.D09G232000 Gossypium hirsutum HOM05D004511 ORTHO05D005348 1.0e-28 130.6 81 77.8
Psat6g108520 Pisum sativum HOM05D004511 ORTHO05D005348 1.0e-28 130.6 65 87.7
MELO3C006369.2 Cucumis melo HOM05D004511 ORTHO05D005348 1.3e-28 130.2 106 65.1
Medtr1g045670 Medicago truncatula HOM05D004511 ORTHO05D005348 2.9e-28 129.0 78 76.9
Phvul.007G232900 Phaseolus vulgaris HOM05D004511 ORTHO05D005348 2.9e-28 129.0 78 74.4
HanXRQChr06g0182821 Helianthus annuus HOM05D004511 ORTHO05D005348 3.8e-28 128.6 81 74.1
VMungo0720G1651 Vigna mungo HOM05D004511 ORTHO05D005348 6.5e-28 127.9 78 73.1
Zm00001eb426210 Zea mays HOM05D004511 ORTHO05D005348 1.1e-27 127.1 65 89.2
Glyma.10G121560 Glycine max HOM05D004511 ORTHO05D005348 1.9e-27 126.3 107 59.8
HPP92_015182 Vanilla planifolia HOM05D004511 ORTHO05D005348 1.9e-27 126.3 78 75.6
Lsat_1_v5_gn_2_41221 Lactuca sativa HOM05D004511 ORTHO05D005348 3.2e-27 125.6 81 69.1
AL2G22890 Arabidopsis lyrata HOM05D004511 ORTHO05D005348 4.2e-27 125.2 76 77.6
Os04g0507000 Oryza sativa ssp. japonica HOM05D004511 ORTHO05D005348 4.2e-27 125.2 65 84.6
SHI00817 Sapria himalayana HOM05D004511 ORTHO05D005348 1.2e-26 123.6 81 70.4
Peaxi162Scf00531g00610 Petunia axillaris HOM05D004511 ORTHO05D005348 1.6e-26 123.2 60 91.7
Glyma.10G121584 Glycine max HOM05D004511 ORTHO05D005348 2.7e-26 122.5 65 83.1
HanXRQChr01g0023051 Helianthus annuus HOM05D004511 ORTHO05D005348 2.7e-26 122.5 81 65.4
Glyma.10G121578 Glycine max HOM05D004511 ORTHO05D005348 3.6e-26 122.1 78 73.1
Ca_07387_v3 Cicer arietinum L. HOM05D004511 ORTHO05D005348 1.8e-25 119.8 76 76.3
ATR0787G210 Amborella trichopoda HOM05D004511 ORTHO05D005348 3.0e-25 119.0 78 69.2
Glyma.10G121600 Glycine max HOM05D004511 ORTHO05D005348 3.9e-25 118.6 65 81.5
Oeu061869.1 Olea europaea HOM05D004511 ORTHO05D005348 1.1e-24 117.1 72 75.0
SEGI_11740 Sequoiadendron giganteum HOM05D004511 ORTHO05D005348 1.1e-24 117.1 65 75.4
SEGI_26830 Sequoiadendron giganteum HOM05D004511 ORTHO05D005348 1.1e-24 117.1 65 75.4
Lj6A637T62 Lonicera japonica HOM05D004511 ORTHO05D005348 3.3e-24 115.5 56 92.9
EL10Ac9g21855 Beta vulgaris HOM05D004511 ORTHO05D005348 5.7e-24 114.8 116 50.9
Atru.chr4.1900 Acer truncatum HOM05D004511 ORTHO05D005348 1.3e-23 113.6 69 75.4
unitig_747.g21671 Utricularia gibba HOM05D004511 ORTHO05D005348 3.7e-23 112.1 83 66.3
Mapoly0067s0046 Marchantia polymorpha HOM05D004511 ORTHO05D005348 4.8e-23 111.7 81 55.6
Ca_26419_v3 Cicer arietinum L. HOM05D004511 ORTHO05D005348 6.3e-23 111.3 65 81.5
SMO364G0324 Selaginella moellendorffii HOM05D004511 ORTHO05D005348 2.0e-21 106.3 81 56.8
Ca_30594_v3 Cicer arietinum L. HOM05D004511 ORTHO05D005348 3.4e-21 105.5 67 76.1
Pp3c23_17640 Physcomitrium patens HOM05D004511 ORTHO05D005348 5.2e-17 91.7 65 60.0
Pp3c8_22090 Physcomitrium patens HOM05D004511 ORTHO05D005348 4.4e-16 88.6 65 60.0
CDE08G1007 Ceratophyllum demersum HOM05D004511 ORTHO05D005348 3.7e-15 85.5 43 83.7
TPR.G7054 Trifolium pratense HOM05D004511 ORTHO05D005348 4.8e-15 85.1 42 88.1
Cpa.g.c32688 Carica papaya HOM05D004511 ORTHO05D005348 1.1e-14 84.0 40 90.0
PRCOL_00002937 Prasinoderma coloniale HOM05D004511 ORTHO05D005348 1.1e-11 73.9 79 43.0
MCO07G727 Micromonas commoda HOM05D004511 ORTHO05D005348 5.5e-11 71.6 124 38.7


User provided reference genes

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