Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0021232 Camellia sinensis var. sinensis HOM05D006305 ORTHO05D007984 5.3e-213 744.2 404 100.0
CSS0018445 Camellia sinensis var. sinensis HOM05D006305 ORTHO05D007984 8.5e-203 710.3 404 92.6
Rhsim05G0143900 Rhododendron simsii HOM05D006305 ORTHO05D007984 5.7e-159 564.7 399 81.5
Dinv23970 Davidia involucrata HOM05D006305 ORTHO05D007984 1.9e-154 549.7 407 75.4
vmacro19639 Vaccinium macrocarpon HOM05D006305 ORTHO05D007984 8.0e-153 544.3 455 69.7
QL03p004578 Quercus lobata HOM05D006305 ORTHO05D007984 1.1e-146 523.9 412 70.1
MD04G1208500 Malus domestica HOM05D006305 ORTHO05D007984 2.5e-146 522.7 397 71.8
GSVIVG01000016001 Vitis vinifera HOM05D006305 ORTHO05D007984 1.8e-144 516.5 388 75.3
Cc02_g33730 Coffea canephora HOM05D006305 ORTHO05D007984 4.0e-144 515.4 385 74.0
CANSAT54G0217 Cannabis sativa HOM05D006305 ORTHO05D007984 6.8e-144 514.6 394 69.3
Eucgr.H04470 Eucalyptus grandis HOM05D006305 ORTHO05D007984 5.8e-143 511.5 400 74.2
CiPaw.07G015100 Carya illinoinensis HOM05D006305 ORTHO05D007984 1.6e-140 503.4 384 69.8
Manes.09G164300 Manihot esculenta HOM05D006305 ORTHO05D007984 2.1e-140 503.1 394 69.3
FAN14G0751 Fragaria x ananassa HOM05D006305 ORTHO05D007984 4.6e-140 501.9 393 67.2
FAN14G5210 Fragaria x ananassa HOM05D006305 ORTHO05D007984 4.6e-140 501.9 393 67.2
Nitab4.5_0002756g0070 Nicotiana tabacum HOM05D006305 ORTHO05D007984 4.6e-140 501.9 404 69.3
FAN05G5097 Fragaria x ananassa HOM05D006305 ORTHO05D007984 3.9e-139 498.8 393 66.9
Glyma.10G156300 Glycine max HOM05D006305 ORTHO05D007984 3.9e-139 498.8 414 64.7
FvH4_6g05460 Fragaria vesca HOM05D006305 ORTHO05D007984 1.5e-138 496.9 393 66.9
Phvul.007G181700 Phaseolus vulgaris HOM05D006305 ORTHO05D007984 1.5e-138 496.9 403 67.5
Potri.005G036700 Populus trichocarpa HOM05D006305 ORTHO05D007984 1.9e-138 496.5 405 71.6
RcHm_v2.0_Chr3g0454231 Rosa chinensis HOM05D006305 ORTHO05D007984 3.3e-138 495.7 396 66.7
Lsat_1_v5_gn_2_67520 Lactuca sativa HOM05D006305 ORTHO05D007984 4.3e-138 495.4 366 71.9
TWI56G0624 Tripterygium wilfordii HOM05D006305 ORTHO05D007984 4.3e-138 495.4 400 69.5
Atru.chr2.472 Acer truncatum HOM05D006305 ORTHO05D007984 9.5e-138 494.2 409 65.3
arahy.Tifrunner.gnm1.ann1.84BFE2 Arachis hypogaea HOM05D006305 ORTHO05D007984 1.6e-137 493.4 410 70.2
Gorai.013G204500 Gossypium raimondii HOM05D006305 ORTHO05D007984 2.1e-137 493.0 384 71.6
PGSC0003DMG400024658 Solanum tuberosum HOM05D006305 ORTHO05D007984 2.1e-137 493.0 395 70.6
Sabra05G0037100 Salix brachista HOM05D006305 ORTHO05D007984 4.7e-137 491.9 398 72.4
Lj9A683T26 Lonicera japonica HOM05D006305 ORTHO05D007984 6.2e-137 491.5 404 68.8
Gohir.A13G173500 Gossypium hirsutum HOM05D006305 ORTHO05D007984 8.1e-137 491.1 394 70.3
Gohir.D13G179200 Gossypium hirsutum HOM05D006305 ORTHO05D007984 8.1e-137 491.1 383 71.8
Ca_10097_v3 Cicer arietinum L. HOM05D006305 ORTHO05D007984 1.1e-136 490.7 401 66.1
PGR031G3204 Punica granatum HOM05D006305 ORTHO05D007984 1.1e-136 490.7 395 71.1
Solyc03g115580.4 Solanum lycopersicum HOM05D006305 ORTHO05D007984 2.4e-136 489.6 404 68.1
SGA_v2.0_scaffold34G13953 Striga asiatica HOM05D006305 ORTHO05D007984 4.0e-136 488.8 392 68.1
arahy.Tifrunner.gnm1.ann1.39Z7HW Arachis hypogaea HOM05D006305 ORTHO05D007984 2.0e-135 486.5 393 71.8
FAN05G0068 Fragaria x ananassa HOM05D006305 ORTHO05D007984 2.0e-135 486.5 393 65.9
Peaxi162Scf00274g00026 Petunia axillaris HOM05D006305 ORTHO05D007984 2.0e-135 486.5 428 63.8
VMungo0720G1654 Vigna mungo HOM05D006305 ORTHO05D007984 2.6e-135 486.1 376 72.6
CAN.G479.41 Capsicum annuum HOM05D006305 ORTHO05D007984 3.4e-135 485.7 396 67.2
Sopen03g034570 Solanum pennellii HOM05D006305 ORTHO05D007984 3.4e-135 485.7 397 70.3
Medtr1g082570 Medicago truncatula HOM05D006305 ORTHO05D007984 1.3e-134 483.8 406 65.3
Lj5g0026498 Lotus japonicus HOM05D006305 ORTHO05D007984 4.1e-133 478.8 374 71.9
MSTRG.306 Avicennia marina HOM05D006305 ORTHO05D007984 5.4e-133 478.4 394 66.2
Thecc.05G307300 Theobroma cacao HOM05D006305 ORTHO05D007984 7.1e-133 478.0 402 64.7
Migut.F01514 Erythranthe guttata HOM05D006305 ORTHO05D007984 1.2e-132 477.2 391 66.0
HanXRQChr15g0472081 Helianthus annuus HOM05D006305 ORTHO05D007984 1.0e-131 474.2 381 69.0
Psat0ss6702g0320 Pisum sativum HOM05D006305 ORTHO05D007984 1.0e-131 474.2 406 64.3
TAR636G3548 Trochodendron aralioides HOM05D006305 ORTHO05D007984 1.0e-131 474.2 396 70.5
Hund21683 Selenicereus undatus HOM05D006305 ORTHO05D007984 2.3e-131 473.0 381 73.8
ECA238G3439 Erigeron canadensis HOM05D006305 ORTHO05D007984 6.6e-131 471.5 376 71.3
ClCG08G002270 Citrullus lanatus HOM05D006305 ORTHO05D007984 8.6e-131 471.1 392 65.6
Lalb_Chr02g0148341 Lupinus albus HOM05D006305 ORTHO05D007984 4.3e-130 468.8 399 68.2
EL10Ac4g09328 Beta vulgaris HOM05D006305 ORTHO05D007984 3.6e-129 465.7 390 65.6
Hma1.2p1_0666F.1_g199520 Hydrangea macrophylla HOM05D006305 ORTHO05D007984 1.8e-128 463.4 324 74.1
Ah.06g189130 Amaranthus hybridus HOM05D006305 ORTHO05D007984 2.6e-127 459.5 398 65.3
BcaC05g30168 Brassica carinata HOM05D006305 ORTHO05D007984 1.3e-126 457.2 412 62.9
SalBow6G6985 Salvia bowleyana HOM05D006305 ORTHO05D007984 1.3e-126 457.2 402 63.2
DCAR_029432 Daucus carota HOM05D006305 ORTHO05D007984 2.2e-126 456.4 401 68.3
FAN02G0061 Fragaria x ananassa HOM05D006305 ORTHO05D007984 1.9e-125 453.4 397 64.0
Thhalv10020823m.g Eutrema salsugineum HOM05D006305 ORTHO05D007984 1.2e-124 450.7 387 65.4
Carub.0003s0446 Capsella rubella HOM05D006305 ORTHO05D007984 2.7e-124 449.5 387 64.6
Ciclev10001229m.g Citrus clementina HOM05D006305 ORTHO05D007984 2.7e-124 449.5 407 64.9
Sp3g04060 Schrenkiella parvula HOM05D006305 ORTHO05D007984 7.8e-124 448.0 401 60.1
A05p42370 Brassica napus HOM05D006305 ORTHO05D007984 1.3e-123 447.2 385 62.6
BraA05t23013Z Brassica rapa HOM05D006305 ORTHO05D007984 1.3e-123 447.2 385 62.6
BcaC05g30009 Brassica carinata HOM05D006305 ORTHO05D007984 1.7e-123 446.8 384 62.0
C05p61980 Brassica napus HOM05D006305 ORTHO05D007984 1.7e-123 446.8 384 62.0
Aqoxy5G04250 Aquilegia oxysepala HOM05D006305 ORTHO05D007984 3.9e-123 445.7 403 60.3
Prupe.6G329400 Prunus persica HOM05D006305 ORTHO05D007984 1.9e-122 443.4 271 81.2
BolC5t34858H Brassica oleracea HOM05D006305 ORTHO05D007984 3.3e-122 442.6 383 61.4
AL3G15630 Arabidopsis lyrata HOM05D006305 ORTHO05D007984 1.6e-121 440.3 393 60.6
CDE11G1040 Ceratophyllum demersum HOM05D006305 ORTHO05D007984 2.1e-121 439.9 385 61.0
Aa31LG5G15590 Aethionema arabicum HOM05D006305 ORTHO05D007984 2.8e-121 439.5 423 59.8
HPP92_015091 Vanilla planifolia HOM05D006305 ORTHO05D007984 4.2e-117 425.6 392 59.4
THA.LOC104820089 Tarenaya hassleriana HOM05D006305 ORTHO05D007984 5.4e-117 425.2 398 60.3
ATR0620G066 Amborella trichopoda HOM05D006305 ORTHO05D007984 1.3e-115 420.6 403 58.6
AUR62000888 Chenopodium quinoa HOM05D006305 ORTHO05D007984 3.0e-115 419.5 288 74.3
AUR62005086 Chenopodium quinoa HOM05D006305 ORTHO05D007984 3.9e-115 419.1 302 72.5
unitig_746.g26625 Utricularia gibba HOM05D006305 ORTHO05D007984 5.6e-114 415.2 346 63.3
COL.COLO4_19840 Corchorus olitorius HOM05D006305 ORTHO05D007984 3.7e-113 412.5 228 87.3
BcaC05g30019 Brassica carinata HOM05D006305 ORTHO05D007984 1.1e-112 411.0 384 58.3
Nn3g18889 Nelumbo nucifera HOM05D006305 ORTHO05D007984 6.9e-112 408.3 277 78.0
Cfa006552 Carpinus fangiana HOM05D006305 ORTHO05D007984 2.6e-111 406.4 291 76.3
PSO782G4398 Papaver somniferum HOM05D006305 ORTHO05D007984 9.9e-111 404.4 404 58.4
Haze_04230 Corylus avellana HOM05D006305 ORTHO05D007984 3.8e-110 402.5 404 62.1
MBI04_g21739_MAGBIO Magnolia biondii HOM05D006305 ORTHO05D007984 1.2e-108 397.5 282 72.3
MELO3C025022.2 Cucumis melo HOM05D006305 ORTHO05D007984 4.6e-108 395.6 301 69.4
CsaV3_6G002610 Cucumis sativus L. HOM05D006305 ORTHO05D007984 1.1e-106 391.0 300 68.3
PSO063G7033 Papaver somniferum HOM05D006305 ORTHO05D007984 5.6e-106 388.7 412 58.7
Zm00001eb043410 Zea mays HOM05D006305 ORTHO05D007984 7.4e-106 388.3 401 55.4
Sed0018566 Sechium edule HOM05D006305 ORTHO05D007984 1.8e-104 383.6 296 67.2
Os10g0518900 Oryza sativa ssp. japonica HOM05D006305 ORTHO05D007984 6.9e-104 381.7 270 70.7
Ciclev10002028m.g Citrus clementina HOM05D006305 ORTHO05D007984 8.2e-97 358.2 254 74.4
Nitab4.5_0001211g0080 Nicotiana tabacum HOM05D006305 ORTHO05D007984 9.0e-96 354.8 407 55.8
AT3G05210 Arabidopsis thaliana HOM05D006305 ORTHO05D007984 7.6e-95 351.7 280 66.8
Pp3c6_29610 Physcomitrium patens HOM05D006305 ORTHO05D007984 1.0e-91 341.3 388 49.7
TPR.G22794 Trifolium pratense HOM05D006305 ORTHO05D007984 1.8e-91 340.5 246 73.6
SMO146G0211 Selaginella moellendorffii HOM05D006305 ORTHO05D007984 5.1e-91 339.0 212 76.9
Mapoly0128s0010 Marchantia polymorpha HOM05D006305 ORTHO05D007984 7.4e-90 335.1 304 64.1
Duzib106G1918 Durio zibethinus HOM05D006305 ORTHO05D007984 1.3e-89 334.3 401 53.9
Hma1.2p1_0666F.1_g199530 Hydrangea macrophylla HOM05D006305 ORTHO05D007984 4.1e-88 329.3 198 83.3
Ciclev10003828m.g Citrus clementina HOM05D006305 ORTHO05D007984 5.3e-88 328.9 311 59.2
CBR_g4857 Chara braunii HOM05D006305 ORTHO05D007984 2.9e-86 323.2 283 58.0
Cpa.g.sc1183.2 Carica papaya HOM05D006305 ORTHO05D007984 1.8e-80 303.9 411 46.0
Sc16g0008400 Simmondsia chinensis HOM05D006305 ORTHO05D007984 3.1e-80 303.1 238 66.4
CARHR079550 Cardamine hirsuta HOM05D006305 ORTHO05D007984 3.2e-69 266.5 149 83.2
MBI04_g44620_MAGBIO Magnolia biondii HOM05D006305 ORTHO05D007984 6.1e-68 262.3 212 66.5
Ciclev10003460m.g Citrus clementina HOM05D006305 ORTHO05D007984 1.3e-65 254.6 254 58.7
Ciclev10003373m.g Citrus clementina HOM05D006305 ORTHO05D007984 3.1e-64 250.0 292 53.1
AagrBONN_evm.TU.Sc2ySwM_369.531 Anthoceros agrestis HOM05D006305 ORTHO05D007984 5.0e-62 242.7 280 47.9
Cre03.g196651 Chlamydomonas reinhardtii HOM05D006305 ORTHO05D007984 1.9e-61 240.7 197 57.9
PRCOL_00003423 Prasinoderma coloniale HOM05D006305 ORTHO05D007984 2.3e-43 180.6 191 47.1
Cfa026476 Carpinus fangiana HOM05D006305 ORTHO05D007984 3.7e-41 173.3 286 37.1
MCO01G606 Micromonas commoda HOM05D006305 ORTHO05D007984 1.2e-31 141.7 209 37.8
TPR.G7405 Trifolium pratense HOM05D006305 ORTHO05D007984 1.6e-31 141.4 161 54.0
SalBow6G3462 Salvia bowleyana HOM05D006305 ORTHO05D007984 2.7e-31 140.6 158 52.5
Glyma.20G232002 Glycine max HOM05D006305 ORTHO05D007984 1.1e-21 108.6 70 78.6
Pp3c16_18520 Physcomitrium patens HOM05D006305 ORTHO05D007984 8.1e-12 75.9 43 74.4
Cpa.g.sc48.16 Carica papaya HOM05D006305 ORTHO05D007984 3.1e-11 73.9 101 46.5
MBI04_g33407_MAGBIO Magnolia biondii HOM05D006305 ORTHO05D007984 3.8e-09 67.0 128 40.6
MELO3C033326.2 Cucumis melo HOM05D006305 ORTHO05D168382 1.4e-08 65.1 34 88.2
Atru.chr11.1544 Acer truncatum HOM05D006305 ORTHO05D007984 1.3e-06 58.5 73 49.3


User provided reference genes

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