Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0020573 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 9.5e-127 456.8 228 100.0
CSS0036951 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 5.5e-90 334.7 233 76.4
CSS0020628 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 2.0e-84 316.2 233 72.5
CSS0033574 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 4.6e-81 305.1 253 67.6
Dinv20408 Davidia involucrata HOM05D001849 ORTHO05D004689 4.3e-79 298.5 241 66.4
CSS0003623 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 2.8e-78 295.8 231 71.4
Actinidia32206 Actinidia chinensis HOM05D001849 ORTHO05D004689 4.8e-78 295.0 233 66.1
CSS0050059 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 4.8e-78 295.0 239 69.5
Lj9C535G6 Lonicera japonica HOM05D001849 ORTHO05D004689 9.0e-77 290.8 241 64.3
GSVIVG01016717001 Vitis vinifera HOM05D001849 ORTHO05D004689 3.4e-76 288.9 241 62.7
CiPaw.01G216000 Carya illinoinensis HOM05D001849 ORTHO05D004689 4.5e-76 288.5 233 65.2
Eucgr.K02038 Eucalyptus grandis HOM05D001849 ORTHO05D004689 2.9e-75 285.8 233 63.9
Cc04_g01040 Coffea canephora HOM05D001849 ORTHO05D004689 5.0e-75 285.0 233 64.8
Hma1.2p1_0229F.1_g096770 Hydrangea macrophylla HOM05D001849 ORTHO05D004689 5.0e-75 285.0 233 63.9
Cfa003503 Carpinus fangiana HOM05D001849 ORTHO05D004689 6.5e-75 284.6 233 65.2
vmacro15054 Vaccinium macrocarpon HOM05D001849 ORTHO05D004689 1.1e-74 283.9 233 64.8
Hma1.2p1_0229F.1_g096760 Hydrangea macrophylla HOM05D001849 ORTHO05D004689 1.4e-74 283.5 232 63.8
QL05p003662 Quercus lobata HOM05D001849 ORTHO05D004689 5.5e-74 281.6 233 63.1
SGA_v2.0_scaffold4G02078 Striga asiatica HOM05D001849 ORTHO05D004689 9.4e-74 280.8 234 61.5
CAN.G1243.9 Capsicum annuum HOM05D001849 ORTHO05D004689 1.2e-73 280.4 233 63.9
Sopen12g023890 Solanum pennellii HOM05D001849 ORTHO05D004689 1.6e-73 280.0 233 63.5
MBI13_g01700_MAGBIO Magnolia biondii HOM05D001849 ORTHO05D004689 6.1e-73 278.1 233 60.5
Peaxi162Scf00177g00518 Petunia axillaris HOM05D001849 ORTHO05D004689 6.1e-73 278.1 233 63.5
Manes.11G016400 Manihot esculenta HOM05D001849 ORTHO05D004689 7.9e-73 277.7 233 63.5
Solyc12g049410.3 Solanum lycopersicum HOM05D001849 ORTHO05D004689 1.0e-72 277.3 233 63.1
TWI59G1440 Tripterygium wilfordii HOM05D001849 ORTHO05D004689 1.0e-72 277.3 233 61.8
Nitab4.5_0000189g0010 Nicotiana tabacum HOM05D001849 ORTHO05D004689 1.4e-72 276.9 233 62.2
Lsat_1_v5_gn_4_91381 Lactuca sativa HOM05D001849 ORTHO05D004689 1.8e-72 276.6 246 61.4
SalBow7G1889 Salvia bowleyana HOM05D001849 ORTHO05D004689 1.8e-72 276.6 233 60.9
Ciclev10027090m.g Citrus clementina HOM05D001849 ORTHO05D004689 3.0e-72 275.8 233 61.4
Nitab4.5_0004322g0010 Nicotiana tabacum HOM05D001849 ORTHO05D004689 3.0e-72 275.8 233 61.8
Sabra01G0127400 Salix brachista HOM05D001849 ORTHO05D004689 8.8e-72 274.2 233 61.8
CsaV3_7G034250 Cucumis sativus L. HOM05D001849 ORTHO05D004689 2.0e-71 273.1 233 62.7
Migut.D00924 Erythranthe guttata HOM05D001849 ORTHO05D004689 2.5e-71 272.7 233 60.1
Cpa.g.sc169.28 Carica papaya HOM05D001849 ORTHO05D004689 4.3e-71 271.9 235 60.4
Potri.001G165900 Populus trichocarpa HOM05D001849 ORTHO05D004689 5.7e-71 271.6 233 61.4
Sed0016273 Sechium edule HOM05D001849 ORTHO05D004689 5.7e-71 271.6 233 62.7
Thecc.06G124800 Theobroma cacao HOM05D001849 ORTHO05D004689 7.4e-71 271.2 233 60.9
Gohir.D09G079550 Gossypium hirsutum HOM05D001849 ORTHO05D004689 9.7e-71 270.8 233 61.4
Gorai.006G094800 Gossypium raimondii HOM05D001849 ORTHO05D004689 9.7e-71 270.8 233 61.4
Lalb_Chr10g0101321 Lupinus albus HOM05D001849 ORTHO05D004689 9.7e-71 270.8 233 61.4
Duzib235G0671 Durio zibethinus HOM05D001849 ORTHO05D004689 1.3e-70 270.4 233 60.5
Atru.chr2.1505 Acer truncatum HOM05D001849 ORTHO05D004689 2.2e-70 269.6 233 60.5
Gohir.A09G079900 Gossypium hirsutum HOM05D001849 ORTHO05D004689 2.2e-70 269.6 233 60.9
DCAR_026423 Daucus carota HOM05D001849 ORTHO05D004689 4.8e-70 268.5 241 59.8
Prupe.3G037400 Prunus persica HOM05D001849 ORTHO05D004689 4.8e-70 268.5 233 63.5
THA.LOC104822664 Tarenaya hassleriana HOM05D001849 ORTHO05D004689 8.2e-70 267.7 233 60.5
Aqoxy7G04006 Aquilegia oxysepala HOM05D001849 ORTHO05D004689 1.1e-69 267.3 234 61.1
CANSAT56G0878 Cannabis sativa HOM05D001849 ORTHO05D004689 2.4e-69 266.2 233 60.1
ClCG09G001140 Citrullus lanatus HOM05D001849 ORTHO05D004689 2.4e-69 266.2 235 61.3
FAN14G1459 Fragaria x ananassa HOM05D001849 ORTHO05D004689 5.3e-69 265.0 233 62.7
AUR62001443 Chenopodium quinoa HOM05D001849 ORTHO05D004689 9.1e-69 264.2 243 58.0
TAR626G0833 Trochodendron aralioides HOM05D001849 ORTHO05D004689 9.1e-69 264.2 233 59.7
ECA232G2821 Erigeron canadensis HOM05D001849 ORTHO05D004689 1.5e-68 263.5 238 61.3
FAN02G0489 Fragaria x ananassa HOM05D001849 ORTHO05D004689 1.5e-68 263.5 241 61.0
FAN09G4066 Fragaria x ananassa HOM05D001849 ORTHO05D004689 1.5e-68 263.5 241 61.0
AUR62009922 Chenopodium quinoa HOM05D001849 ORTHO05D004689 2.0e-68 263.1 243 58.0
MELO3C024334.2 Cucumis melo HOM05D001849 ORTHO05D004689 2.0e-68 263.1 241 59.8
FAN05G2930 Fragaria x ananassa HOM05D001849 ORTHO05D004689 2.0e-68 263.1 241 61.0
FvH4_6g35170 Fragaria vesca HOM05D001849 ORTHO05D004689 2.6e-68 262.7 241 61.0
MD17G1148600 Malus domestica HOM05D001849 ORTHO05D004689 2.6e-68 262.7 233 60.5
Duzib192G0006 Durio zibethinus HOM05D001849 ORTHO05D004689 3.4e-68 262.3 233 59.7
Lj3g0004011 Lotus japonicus HOM05D001849 ORTHO05D004689 3.4e-68 262.3 233 59.7
MD09G1178100 Malus domestica HOM05D001849 ORTHO05D004689 3.4e-68 262.3 233 60.9
RcHm_v2.0_Chr2g0146431 Rosa chinensis HOM05D001849 ORTHO05D004689 3.4e-68 262.3 243 60.1
VMungo0331G1611 Vigna mungo HOM05D001849 ORTHO05D004689 4.5e-68 261.9 233 59.7
EL10Ac7g16444 Beta vulgaris HOM05D001849 ORTHO05D004689 1.0e-67 260.8 242 55.8
TPR.G29992 Trifolium pratense HOM05D001849 ORTHO05D004689 2.9e-67 259.2 233 60.1
arahy.Tifrunner.gnm1.ann1.1RN2YG Arachis hypogaea HOM05D001849 ORTHO05D004689 3.8e-67 258.8 233 59.2
Glyma.07G042000 Glycine max HOM05D001849 ORTHO05D004689 3.8e-67 258.8 239 57.7
HanXRQChr09g0277131 Helianthus annuus HOM05D001849 ORTHO05D004689 3.8e-67 258.8 238 60.9
Phvul.010G127100 Phaseolus vulgaris HOM05D001849 ORTHO05D004689 5.0e-67 258.5 233 59.2
Psat4g166880 Pisum sativum HOM05D001849 ORTHO05D004689 8.5e-67 257.7 233 59.7
arahy.Tifrunner.gnm1.ann1.RMM65D Arachis hypogaea HOM05D001849 ORTHO05D004689 2.5e-66 256.1 233 58.8
COL.COLO4_30797 Corchorus olitorius HOM05D001849 ORTHO05D004689 5.5e-66 255.0 233 57.9
Aa31LG8G1350 Aethionema arabicum HOM05D001849 ORTHO05D004689 7.2e-66 254.6 233 57.1
PGR119G1999 Punica granatum HOM05D001849 ORTHO05D004689 2.7e-65 252.7 246 55.7
Carub.0003s1373 Capsella rubella HOM05D001849 ORTHO05D004689 6.1e-65 251.5 233 55.8
AL3G26350 Arabidopsis lyrata HOM05D001849 ORTHO05D004689 1.0e-64 250.8 233 56.7
Thhalv10019957m.g Eutrema salsugineum HOM05D001849 ORTHO05D004689 1.4e-64 250.4 233 56.7
AT3G14120 Arabidopsis thaliana HOM05D001849 ORTHO05D004689 3.0e-64 249.2 233 55.8
BcaC05g29121 Brassica carinata HOM05D001849 ORTHO05D004689 3.0e-64 249.2 233 57.1
C05p53520 Brassica napus HOM05D001849 ORTHO05D004689 3.0e-64 249.2 233 57.1
BolC5t34029H Brassica oleracea HOM05D001849 ORTHO05D004689 3.0e-64 249.2 233 57.1
Hund18672 Selenicereus undatus HOM05D001849 ORTHO05D004689 3.9e-64 248.8 233 55.8
PSO724G1390 Papaver somniferum HOM05D001849 ORTHO05D004689 6.7e-64 248.1 234 56.4
A05p35330 Brassica napus HOM05D001849 ORTHO05D004689 1.1e-63 247.3 233 56.7
CDE07G1134 Ceratophyllum demersum HOM05D001849 ORTHO05D004689 1.5e-63 246.9 234 56.8
Haze_16076 Corylus avellana HOM05D001849 ORTHO05D004689 1.5e-63 246.9 235 59.6
CDE06G0404 Ceratophyllum demersum HOM05D001849 ORTHO05D004689 2.0e-63 246.5 234 56.8
Medtr8g022010 Medicago truncatula HOM05D001849 ORTHO05D004689 9.7e-63 244.2 235 57.9
PSO386G0179 Papaver somniferum HOM05D001849 ORTHO05D004689 1.3e-62 243.8 234 56.0
Sp3g12380 Schrenkiella parvula HOM05D001849 ORTHO05D004689 1.7e-62 243.4 233 55.8
BraA05t22343Z Brassica rapa HOM05D001849 ORTHO05D004689 3.1e-61 239.2 246 52.8
ATR0681G401 Amborella trichopoda HOM05D001849 ORTHO05D004689 7.0e-61 238.0 241 52.7
HPP92_022009 Vanilla planifolia HOM05D001849 ORTHO05D004689 4.5e-60 235.3 234 53.4
C01p50480 Brassica napus HOM05D001849 ORTHO05D004689 5.9e-60 235.0 242 52.1
BolC1t05000H Brassica oleracea HOM05D001849 ORTHO05D004689 5.9e-60 235.0 246 51.6
unitig_578.g16691 Utricularia gibba HOM05D001849 ORTHO05D004689 2.3e-56 223.0 207 57.0
SHI25232 Sapria himalayana HOM05D001849 ORTHO05D004689 8.8e-56 221.1 231 51.1
Zm00001eb165950 Zea mays HOM05D001849 ORTHO05D004689 3.3e-55 219.2 234 52.6
CARHR088980 Cardamine hirsuta HOM05D001849 ORTHO05D004689 1.2e-52 210.7 197 55.8
Mapoly0024s0112 Marchantia polymorpha HOM05D001849 ORTHO05D004689 1.1e-50 204.1 243 46.5
Rhsim08G0241300 Rhododendron simsii HOM05D001849 ORTHO05D004689 4.2e-50 202.2 233 50.2
AagrBONN_evm.TU.Sc2ySwM_362.2383 Anthoceros agrestis HOM05D001849 ORTHO05D004689 1.4e-48 197.2 235 46.0
SEGI_21815 Sequoiadendron giganteum HOM05D001849 ORTHO05D004689 2.3e-48 196.4 230 46.5
Ca_23411_v3 Cicer arietinum L. HOM05D001849 ORTHO05D004689 1.3e-46 190.7 121 77.7
BraA01t03995Z Brassica rapa HOM05D001849 ORTHO05D004689 7.7e-44 181.4 204 50.5
Oeu008524.4 Olea europaea HOM05D001849 ORTHO05D004689 1.1e-42 177.6 228 46.1
Pp3c8_15880 Physcomitrium patens HOM05D001849 ORTHO05D004689 4.4e-39 165.6 241 40.2
SMO304G0023 Selaginella moellendorffii HOM05D001849 ORTHO05D004689 5.4e-37 158.7 248 42.3
Lsat_1_v5_gn_8_46020 Lactuca sativa HOM05D001849 ORTHO05D004689 9.8e-31 137.9 89 76.4
Os11g0643700 Oryza sativa ssp. japonica HOM05D001849 ORTHO05D004689 1.3e-27 127.5 151 49.7
Lsat_1_v5_gn_3_42421 Lactuca sativa HOM05D001849 ORTHO05D004689 2.1e-17 93.6 61 70.5
Lsat_1_v5_gn_7_52500 Lactuca sativa HOM05D001849 ORTHO05D004689 1.6e-12 77.4 45 75.6
CBR_g39720 Chara braunii HOM05D001849 ORTHO05D004689 3.6e-09 66.2 202 26.7
Ca_23412_v3 Cicer arietinum L. HOM05D001849 ORTHO05D004689 8.1e-09 65.1 76 47.4


User provided reference genes

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