Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0019722 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 1.8e-108 396.0 200 100.0
CSS0036951 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 4.1e-73 278.5 181 82.9
CSS0020628 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 1.9e-70 269.6 181 81.2
Dinv20408 Davidia involucrata HOM05D001849 ORTHO05D004689 3.5e-64 248.8 194 71.1
CSS0047517 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 1.5e-62 243.4 194 72.2
Hma1.2p1_0229F.1_g096770 Hydrangea macrophylla HOM05D001849 ORTHO05D004689 3.2e-62 242.3 181 71.8
CSS0050059 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 1.4e-60 236.9 181 73.5
CSS0003623 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 3.0e-60 235.7 181 73.5
GSVIVG01016717001 Vitis vinifera HOM05D001849 ORTHO05D004689 6.7e-60 234.6 194 66.5
TAR626G0833 Trochodendron aralioides HOM05D001849 ORTHO05D004689 8.2e-58 227.6 181 68.0
vmacro15054 Vaccinium macrocarpon HOM05D001849 ORTHO05D004689 2.4e-57 226.1 194 65.5
CiPaw.01G216000 Carya illinoinensis HOM05D001849 ORTHO05D004689 7.0e-57 224.6 194 66.5
Rhsim08G0241300 Rhododendron simsii HOM05D001849 ORTHO05D004689 7.0e-57 224.6 202 64.4
EL10Ac7g16444 Beta vulgaris HOM05D001849 ORTHO05D004689 3.5e-56 222.2 181 64.6
Prupe.3G037400 Prunus persica HOM05D001849 ORTHO05D004689 3.5e-56 222.2 194 63.9
Cfa003503 Carpinus fangiana HOM05D001849 ORTHO05D004689 7.7e-56 221.1 194 65.5
Cc04_g01040 Coffea canephora HOM05D001849 ORTHO05D004689 7.7e-56 221.1 181 67.4
Hund18672 Selenicereus undatus HOM05D001849 ORTHO05D004689 2.9e-55 219.2 181 65.2
PGR119G1999 Punica granatum HOM05D001849 ORTHO05D004689 1.5e-54 216.9 181 65.7
Migut.D00924 Erythranthe guttata HOM05D001849 ORTHO05D004689 5.5e-54 214.9 186 62.4
Oeu008524.4 Olea europaea HOM05D001849 ORTHO05D004689 5.5e-54 214.9 180 65.6
MD17G1148600 Malus domestica HOM05D001849 ORTHO05D004689 9.4e-54 214.2 181 63.0
Lj9C535G6 Lonicera japonica HOM05D001849 ORTHO05D004689 1.2e-53 213.8 160 71.9
Manes.11G016400 Manihot esculenta HOM05D001849 ORTHO05D004689 1.2e-53 213.8 181 66.3
Haze_16076 Corylus avellana HOM05D001849 ORTHO05D004689 8.0e-53 211.1 191 63.9
MD09G1178100 Malus domestica HOM05D001849 ORTHO05D004689 8.0e-53 211.1 181 62.4
Atru.chr2.1505 Acer truncatum HOM05D001849 ORTHO05D004689 1.4e-52 210.3 194 61.3
Duzib235G0671 Durio zibethinus HOM05D001849 ORTHO05D004689 2.3e-52 209.5 181 65.7
TPR.G29992 Trifolium pratense HOM05D001849 ORTHO05D004689 3.0e-52 209.1 195 60.0
QL05p003662 Quercus lobata HOM05D001849 ORTHO05D004689 4.0e-52 208.8 194 62.4
Eucgr.K02038 Eucalyptus grandis HOM05D001849 ORTHO05D004689 1.2e-51 207.2 181 63.0
Lj3g0004011 Lotus japonicus HOM05D001849 ORTHO05D004689 1.2e-51 207.2 194 62.4
MBI13_g01700_MAGBIO Magnolia biondii HOM05D001849 ORTHO05D004689 1.2e-51 207.2 194 60.8
Solyc12g049410.3 Solanum lycopersicum HOM05D001849 ORTHO05D004689 1.2e-51 207.2 194 59.8
Sopen12g023890 Solanum pennellii HOM05D001849 ORTHO05D004689 1.2e-51 207.2 194 59.8
Thecc.06G124800 Theobroma cacao HOM05D001849 ORTHO05D004689 3.4e-51 205.7 181 64.1
ECA232G2821 Erigeron canadensis HOM05D001849 ORTHO05D004689 4.4e-51 205.3 177 63.3
Nitab4.5_0000189g0010 Nicotiana tabacum HOM05D001849 ORTHO05D004689 7.5e-51 204.5 194 58.8
Nitab4.5_0004322g0010 Nicotiana tabacum HOM05D001849 ORTHO05D004689 7.5e-51 204.5 194 58.2
Sabra01G0127400 Salix brachista HOM05D001849 ORTHO05D004689 9.8e-51 204.1 181 65.2
Psat4g166880 Pisum sativum HOM05D001849 ORTHO05D004689 1.3e-50 203.8 194 59.3
Duzib192G0006 Durio zibethinus HOM05D001849 ORTHO05D004689 1.7e-50 203.4 181 63.0
SalBow7G1889 Salvia bowleyana HOM05D001849 ORTHO05D004689 1.7e-50 203.4 180 61.1
Gohir.D09G079550 Gossypium hirsutum HOM05D001849 ORTHO05D004689 2.2e-50 203.0 181 64.6
Gorai.006G094800 Gossypium raimondii HOM05D001849 ORTHO05D004689 2.2e-50 203.0 181 64.6
Cpa.g.sc169.27 Carica papaya HOM05D001849 ORTHO05D004689 2.8e-50 202.6 186 59.7
RcHm_v2.0_Chr2g0146431 Rosa chinensis HOM05D001849 ORTHO05D004689 2.8e-50 202.6 181 61.3
Sed0016273 Sechium edule HOM05D001849 ORTHO05D004689 3.7e-50 202.2 181 60.2
HanXRQChr09g0277131 Helianthus annuus HOM05D001849 ORTHO05D004689 8.3e-50 201.1 190 58.9
Peaxi162Scf00177g00518 Petunia axillaris HOM05D001849 ORTHO05D004689 1.1e-49 200.7 181 59.7
Ciclev10027090m.g Citrus clementina HOM05D001849 ORTHO05D004689 1.4e-49 200.3 181 62.4
Gohir.A09G079900 Gossypium hirsutum HOM05D001849 ORTHO05D004689 1.4e-49 200.3 181 64.1
COL.COLO4_30797 Corchorus olitorius HOM05D001849 ORTHO05D004689 2.4e-49 199.5 181 63.0
Medtr8g022010 Medicago truncatula HOM05D001849 ORTHO05D004689 2.4e-49 199.5 181 60.2
Potri.001G165900 Populus trichocarpa HOM05D001849 ORTHO05D004689 2.4e-49 199.5 181 64.1
FAN02G0489 Fragaria x ananassa HOM05D001849 ORTHO05D004689 3.1e-49 199.1 181 58.6
PSO386G0179 Papaver somniferum HOM05D001849 ORTHO05D004689 3.1e-49 199.1 181 61.3
CAN.G1243.9 Capsicum annuum HOM05D001849 ORTHO05D004689 4.1e-49 198.7 194 57.2
FvH4_6g35170 Fragaria vesca HOM05D001849 ORTHO05D004689 5.4e-49 198.4 181 58.6
THA.LOC104822664 Tarenaya hassleriana HOM05D001849 ORTHO05D004689 5.4e-49 198.4 179 62.6
VMungo0331G1611 Vigna mungo HOM05D001849 ORTHO05D004689 7.0e-49 198.0 194 59.8
Thhalv10019957m.g Eutrema salsugineum HOM05D001849 ORTHO05D004689 9.1e-49 197.6 192 59.9
FAN05G2930 Fragaria x ananassa HOM05D001849 ORTHO05D004689 2.0e-48 196.4 181 58.6
FAN14G1459 Fragaria x ananassa HOM05D001849 ORTHO05D004689 2.0e-48 196.4 179 58.7
PSO724G1390 Papaver somniferum HOM05D001849 ORTHO05D004689 2.7e-48 196.1 181 60.8
DCAR_026423 Daucus carota HOM05D001849 ORTHO05D004689 4.5e-48 195.3 181 59.7
CsaV3_7G034250 Cucumis sativus L. HOM05D001849 ORTHO05D004689 5.9e-48 194.9 181 56.4
Phvul.010G127100 Phaseolus vulgaris HOM05D001849 ORTHO05D004689 5.9e-48 194.9 194 58.8
SGA_v2.0_scaffold4G02078 Striga asiatica HOM05D001849 ORTHO05D004689 7.7e-48 194.5 168 61.9
Carub.0003s1373 Capsella rubella HOM05D001849 ORTHO05D004689 1.0e-47 194.1 192 59.9
Ca_23412_v3 Cicer arietinum L. HOM05D001849 ORTHO05D004689 1.0e-47 194.1 194 59.8
Glyma.07G042000 Glycine max HOM05D001849 ORTHO05D004689 1.0e-47 194.1 194 59.3
AT3G14120 Arabidopsis thaliana HOM05D001849 ORTHO05D004689 1.7e-47 193.4 192 59.4
arahy.Tifrunner.gnm1.ann1.RMM65D Arachis hypogaea HOM05D001849 ORTHO05D004689 2.3e-47 193.0 194 57.2
arahy.Tifrunner.gnm1.ann1.1RN2YG Arachis hypogaea HOM05D001849 ORTHO05D004689 3.8e-47 192.2 194 57.2
Sp3g12380 Schrenkiella parvula HOM05D001849 ORTHO05D004689 3.8e-47 192.2 179 60.9
AL3G26350 Arabidopsis lyrata HOM05D001849 ORTHO05D004689 6.5e-47 191.4 192 58.9
A01p39550 Brassica napus HOM05D001849 ORTHO05D004689 1.1e-46 190.7 192 58.9
BraA01t03995Z Brassica rapa HOM05D001849 ORTHO05D004689 1.5e-46 190.3 192 58.9
CANSAT56G0878 Cannabis sativa HOM05D001849 ORTHO05D004689 1.5e-46 190.3 181 59.7
ClCG09G001140 Citrullus lanatus HOM05D001849 ORTHO05D004689 1.5e-46 190.3 175 57.7
CARHR088980 Cardamine hirsuta HOM05D001849 ORTHO05D004689 3.3e-46 189.1 192 58.9
HPP92_022009 Vanilla planifolia HOM05D001849 ORTHO05D004689 3.3e-46 189.1 181 57.5
Lalb_Chr10g0101321 Lupinus albus HOM05D001849 ORTHO05D004689 4.2e-46 188.7 200 57.5
A05p35330 Brassica napus HOM05D001849 ORTHO05D004689 7.2e-46 188.0 192 58.3
BraA05t22343Z Brassica rapa HOM05D001849 ORTHO05D004689 7.2e-46 188.0 192 58.3
C01p50480 Brassica napus HOM05D001849 ORTHO05D004689 1.2e-45 187.2 192 57.8
Lsat_1_v5_gn_4_91381 Lactuca sativa HOM05D001849 ORTHO05D004689 1.2e-45 187.2 181 55.8
TWI59G1440 Tripterygium wilfordii HOM05D001849 ORTHO05D004689 1.2e-45 187.2 181 58.0
BolC1t05000H Brassica oleracea HOM05D001849 ORTHO05D004689 2.1e-45 186.4 192 57.8
BcaC05g29121 Brassica carinata HOM05D001849 ORTHO05D004689 3.6e-45 185.7 192 57.8
C05p53520 Brassica napus HOM05D001849 ORTHO05D004689 3.6e-45 185.7 192 57.8
BolC5t34029H Brassica oleracea HOM05D001849 ORTHO05D004689 3.6e-45 185.7 192 57.8
Aa31LG8G1350 Aethionema arabicum HOM05D001849 ORTHO05D004689 4.7e-45 185.3 179 60.3
MELO3C024334.2 Cucumis melo HOM05D001849 ORTHO05D004689 6.1e-45 184.9 186 54.3
unitig_578.g16691 Utricularia gibba HOM05D001849 ORTHO05D004689 1.4e-44 183.7 182 54.9
CDE06G0404 Ceratophyllum demersum HOM05D001849 ORTHO05D004689 2.3e-44 183.0 181 56.4
Aqoxy7G04006 Aquilegia oxysepala HOM05D001849 ORTHO05D004689 8.9e-44 181.0 181 56.4
CDE07G1134 Ceratophyllum demersum HOM05D001849 ORTHO05D004689 1.5e-43 180.3 181 56.4
AUR62009922 Chenopodium quinoa HOM05D001849 ORTHO05D004689 3.7e-42 175.6 165 58.2
AUR62001443 Chenopodium quinoa HOM05D001849 ORTHO05D004689 4.9e-42 175.3 165 58.2
SHI25232 Sapria himalayana HOM05D001849 ORTHO05D004689 1.4e-41 173.7 195 47.7
ATR0681G401 Amborella trichopoda HOM05D001849 ORTHO05D004689 9.2e-41 171.0 182 50.5
Os11g0643700 Oryza sativa ssp. japonica HOM05D001849 ORTHO05D004689 1.1e-38 164.1 181 51.9
SEGI_21815 Sequoiadendron giganteum HOM05D001849 ORTHO05D004689 1.2e-37 160.6 182 50.5
Zm00001eb165950 Zea mays HOM05D001849 ORTHO05D004689 1.8e-36 156.8 184 51.6
AagrBONN_evm.TU.Sc2ySwM_362.2383 Anthoceros agrestis HOM05D001849 ORTHO05D004689 1.4e-25 120.6 184 40.2
FAN09G4066 Fragaria x ananassa HOM05D001849 ORTHO05D004689 1.4e-25 120.6 181 43.1
Mapoly0024s0112 Marchantia polymorpha HOM05D001849 ORTHO05D004689 1.7e-23 113.6 168 38.7
Pp3c8_15880 Physcomitrium patens HOM05D001849 ORTHO05D004689 3.3e-22 109.4 168 42.9
Actinidia32206 Actinidia chinensis HOM05D001849 ORTHO05D004689 1.6e-21 107.1 60 88.3
QL11p014752 Quercus lobata HOM05D001849 ORTHO05D004689 9.9e-19 97.8 86 61.6
HanXRQChr11g0341991 Helianthus annuus HOM05D001849 ORTHO05D004689 7.8e-16 88.2 67 62.7
SMO304G0023 Selaginella moellendorffii HOM05D001849 ORTHO05D004689 1.6e-13 80.5 168 33.9
Zm00001eb307710 Zea mays HOM05D001849 ORTHO05D004689 7.6e-11 71.6 71 50.7


User provided reference genes

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