Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0017594 Camellia sinensis var. sinensis HOM05D005196 ORTHO05D006107 1.1e-44 183.0 91 100.0
Aqoxy7G00203 Aquilegia oxysepala HOM05D005196 ORTHO05D006107 2.7e-24 115.2 77 79.2
Actinidia10607 Actinidia chinensis HOM05D005196 ORTHO05D006107 7.9e-24 113.6 76 78.9
AL2G11140 Arabidopsis lyrata HOM05D005196 ORTHO05D006107 1.3e-23 112.8 77 75.3
AT1G63970 Arabidopsis thaliana HOM05D005196 ORTHO05D006107 1.3e-23 112.8 77 75.3
BcaB07g31421 Brassica carinata HOM05D005196 ORTHO05D006107 1.3e-23 112.8 77 75.3
BcaB07g31533 Brassica carinata HOM05D005196 ORTHO05D006107 1.3e-23 112.8 77 75.3
A09p14050 Brassica napus HOM05D005196 ORTHO05D006107 1.3e-23 112.8 77 75.3
A09p15170 Brassica napus HOM05D005196 ORTHO05D006107 1.3e-23 112.8 77 75.3
BraA09t37052Z Brassica rapa HOM05D005196 ORTHO05D006107 1.3e-23 112.8 77 75.3
CSS0021900 Camellia sinensis var. sinensis HOM05D005196 ORTHO05D006107 1.3e-23 112.8 77 79.2
Duzib068G0196 Durio zibethinus HOM05D005196 ORTHO05D006107 1.3e-23 112.8 77 77.9
PGR031G3114 Punica granatum HOM05D005196 ORTHO05D006107 1.3e-23 112.8 77 76.6
Sp2g00720 Schrenkiella parvula HOM05D005196 ORTHO05D006107 1.3e-23 112.8 77 76.6
C09p16940 Brassica napus HOM05D005196 ORTHO05D006107 1.8e-23 112.5 77 74.0
Carub.0002s0087 Capsella rubella HOM05D005196 ORTHO05D006107 1.8e-23 112.5 77 75.3
Nn1g01669 Nelumbo nucifera HOM05D005196 ORTHO05D006107 2.3e-23 112.1 77 79.2
Hund11434 Selenicereus undatus HOM05D005196 ORTHO05D006107 2.3e-23 112.1 77 77.9
BraA09t37159Z Brassica rapa HOM05D005196 ORTHO05D006107 3.0e-23 111.7 77 74.0
CARHR047010 Cardamine hirsuta HOM05D005196 ORTHO05D006107 3.0e-23 111.7 77 74.0
C09p18370 Brassica napus HOM05D005196 ORTHO05D006107 3.9e-23 111.3 77 75.3
BolC9t54730H Brassica oleracea HOM05D005196 ORTHO05D006107 3.9e-23 111.3 77 75.3
Lsat_1_v5_gn_6_84980 Lactuca sativa HOM05D005196 ORTHO05D006107 3.9e-23 111.3 81 75.3
PSO478G4030 Papaver somniferum HOM05D005196 ORTHO05D006107 3.9e-23 111.3 77 75.3
PSO782G4831 Papaver somniferum HOM05D005196 ORTHO05D006107 3.9e-23 111.3 77 75.3
Prupe.5G106300 Prunus persica HOM05D005196 ORTHO05D006107 3.9e-23 111.3 77 76.6
TAR636G2140 Trochodendron aralioides HOM05D005196 ORTHO05D006107 5.1e-23 110.9 77 77.9
Aa31LG2G1060 Aethionema arabicum HOM05D005196 ORTHO05D006107 6.7e-23 110.5 77 75.3
Lj2A178G47 Lonicera japonica HOM05D005196 ORTHO05D006107 6.7e-23 110.5 77 76.6
MD06G1090700 Malus domestica HOM05D005196 ORTHO05D006107 6.7e-23 110.5 77 76.6
DCAR_005572 Daucus carota HOM05D005196 ORTHO05D006107 8.7e-23 110.2 77 77.9
VMungo0251G1828 Vigna mungo HOM05D005196 ORTHO05D006107 8.7e-23 110.2 85 68.2
BcaC04g22518 Brassica carinata HOM05D005196 ORTHO05D006107 1.1e-22 109.8 77 74.0
Thecc.03G286300 Theobroma cacao HOM05D005196 ORTHO05D006107 1.1e-22 109.8 77 76.6
TWI81G1086 Tripterygium wilfordii HOM05D005196 ORTHO05D006107 1.1e-22 109.8 77 74.0
BcaC04g22662 Brassica carinata HOM05D005196 ORTHO05D006107 1.5e-22 109.4 77 74.0
BolC9t54591H Brassica oleracea HOM05D005196 ORTHO05D006107 1.5e-22 109.4 77 74.0
COL.COLO4_08364 Corchorus olitorius HOM05D005196 ORTHO05D006107 1.5e-22 109.4 77 75.3
Duzib205G0943 Durio zibethinus HOM05D005196 ORTHO05D006107 1.5e-22 109.4 76 77.6
Hma1.2p1_0377F.1_g139550 Hydrangea macrophylla HOM05D005196 ORTHO05D006107 1.5e-22 109.4 77 76.6
MD14G1111600 Malus domestica HOM05D005196 ORTHO05D006107 1.5e-22 109.4 77 75.3
Potri.003G132400 Populus trichocarpa HOM05D005196 ORTHO05D006107 1.5e-22 109.4 77 75.3
SalBow8G4511 Salvia bowleyana HOM05D005196 ORTHO05D006107 1.5e-22 109.4 77 76.6
arahy.Tifrunner.gnm1.ann1.072U0I Arachis hypogaea HOM05D005196 ORTHO05D006107 1.9e-22 109.0 77 75.3
arahy.Tifrunner.gnm1.ann1.RG9U10 Arachis hypogaea HOM05D005196 ORTHO05D006107 1.9e-22 109.0 77 75.3
Cfa012239 Carpinus fangiana HOM05D005196 ORTHO05D006107 1.9e-22 109.0 77 76.6
AUR62010748 Chenopodium quinoa HOM05D005196 ORTHO05D006107 1.9e-22 109.0 77 75.3
HanXRQChr03g0085971 Helianthus annuus HOM05D005196 ORTHO05D006107 1.9e-22 109.0 77 76.6
Potri.001G099300 Populus trichocarpa HOM05D005196 ORTHO05D006107 1.9e-22 109.0 77 75.3
QL12p031809 Quercus lobata HOM05D005196 ORTHO05D006107 1.9e-22 109.0 77 76.6
GSVIVG01019415001 Vitis vinifera HOM05D005196 ORTHO05D006107 1.9e-22 109.0 77 75.3
Ah.07g196720 Amaranthus hybridus HOM05D005196 ORTHO05D006107 2.5e-22 108.6 77 76.6
CANSAT21G0568 Cannabis sativa HOM05D005196 ORTHO05D006107 2.5e-22 108.6 77 75.3
Cpa.g.sc631.3 Carica papaya HOM05D005196 ORTHO05D006107 2.5e-22 108.6 77 74.0
Cfa012242 Carpinus fangiana HOM05D005196 ORTHO05D006107 2.5e-22 108.6 84 71.4
Gohir.D03G078300 Gossypium hirsutum HOM05D005196 ORTHO05D006107 2.5e-22 108.6 77 76.6
Gorai.003G085800 Gossypium raimondii HOM05D005196 ORTHO05D006107 2.5e-22 108.6 77 76.6
Solyc08g081570.3 Solanum lycopersicum HOM05D005196 ORTHO05D006107 2.5e-22 108.6 77 75.3
Sopen08g029880 Solanum pennellii HOM05D005196 ORTHO05D006107 2.5e-22 108.6 77 75.3
PGSC0003DMG400012185 Solanum tuberosum HOM05D005196 ORTHO05D006107 2.5e-22 108.6 77 75.3
CAN.G532.37 Capsicum annuum HOM05D005196 ORTHO05D006107 3.3e-22 108.2 77 75.3
Ciclev10021991m.g Citrus clementina HOM05D005196 ORTHO05D006107 3.3e-22 108.2 77 72.7
Gohir.A02G105500 Gossypium hirsutum HOM05D005196 ORTHO05D006107 3.3e-22 108.2 77 75.3
Nitab4.5_0003015g0100 Nicotiana tabacum HOM05D005196 ORTHO05D006107 3.3e-22 108.2 77 75.3
Nitab4.5_0007906g0030 Nicotiana tabacum HOM05D005196 ORTHO05D006107 3.3e-22 108.2 77 75.3
Peaxi162Scf00074g01724 Petunia axillaris HOM05D005196 ORTHO05D006107 3.3e-22 108.2 77 75.3
Phvul.002G159900 Phaseolus vulgaris HOM05D005196 ORTHO05D006107 3.3e-22 108.2 77 74.0
RcHm_v2.0_Chr7g0196611 Rosa chinensis HOM05D005196 ORTHO05D006107 3.3e-22 108.2 77 74.0
CiPaw.11G130000 Carya illinoinensis HOM05D005196 ORTHO05D006107 4.3e-22 107.8 77 74.0
CiPaw.12G089400 Carya illinoinensis HOM05D005196 ORTHO05D006107 4.3e-22 107.8 77 75.3
ClCG07G007880 Citrullus lanatus HOM05D005196 ORTHO05D006107 4.3e-22 107.8 77 74.0
Haze_08760 Corylus avellana HOM05D005196 ORTHO05D006107 4.3e-22 107.8 77 75.3
MELO3C016339.2 Cucumis melo HOM05D005196 ORTHO05D006107 4.3e-22 107.8 77 74.0
FvH4_5g03170 Fragaria vesca HOM05D005196 ORTHO05D006107 4.3e-22 107.8 77 74.0
FAN08G3453 Fragaria x ananassa HOM05D005196 ORTHO05D006107 4.3e-22 107.8 77 74.0
FAN13G1103 Fragaria x ananassa HOM05D005196 ORTHO05D006107 4.3e-22 107.8 77 74.0
EL10Ac5g12833 Beta vulgaris HOM05D005196 ORTHO05D006107 7.4e-22 107.1 83 68.7
Cc08_g15230 Coffea canephora HOM05D005196 ORTHO05D006107 7.4e-22 107.1 77 75.3
Migut.A00721 Erythranthe guttata HOM05D005196 ORTHO05D006107 7.4e-22 107.1 77 74.0
Sed0013368 Sechium edule HOM05D005196 ORTHO05D006107 7.4e-22 107.1 77 74.0
Atru.chr9.2118 Acer truncatum HOM05D005196 ORTHO05D006107 9.7e-22 106.7 77 72.7
unitig_37.g12237 Utricularia gibba HOM05D005196 ORTHO05D006107 9.7e-22 106.7 77 74.0
MSTRG.11956 Avicennia marina HOM05D005196 ORTHO05D006107 1.3e-21 106.3 77 74.0
Ca_24538_v3 Cicer arietinum L. HOM05D005196 ORTHO05D006107 1.3e-21 106.3 77 72.7
FAN04G1400 Fragaria x ananassa HOM05D005196 ORTHO05D006107 1.3e-21 106.3 77 72.7
FAN18G0698 Fragaria x ananassa HOM05D005196 ORTHO05D006107 1.3e-21 106.3 77 72.7
Glyma.11G021400 Glycine max HOM05D005196 ORTHO05D006107 1.3e-21 106.3 77 72.7
THA.LOC104823600 Tarenaya hassleriana HOM05D005196 ORTHO05D006107 1.3e-21 106.3 77 71.4
ATR0661G112 Amborella trichopoda HOM05D005196 ORTHO05D006107 2.2e-21 105.5 77 72.7
CsaV3_4G006100 Cucumis sativus L. HOM05D005196 ORTHO05D006107 2.2e-21 105.5 77 72.7
Gohir.D08G134600 Gossypium hirsutum HOM05D005196 ORTHO05D006107 2.2e-21 105.5 77 72.7
Gorai.004G137800 Gossypium raimondii HOM05D005196 ORTHO05D006107 2.2e-21 105.5 77 72.7
Medtr5g010010 Medicago truncatula HOM05D005196 ORTHO05D006107 2.2e-21 105.5 77 71.4
Oeu042360.2 Olea europaea HOM05D005196 ORTHO05D006107 2.2e-21 105.5 78 71.8
TPR.G6615 Trifolium pratense HOM05D005196 ORTHO05D006107 2.2e-21 105.5 77 71.4
Lalb_Chr09g0320831 Lupinus albus HOM05D005196 ORTHO05D006107 2.8e-21 105.1 77 70.1
Sabra03G0094900 Salix brachista HOM05D005196 ORTHO05D006107 2.8e-21 105.1 77 74.0
SGA_v2.0_scaffold111G31472 Striga asiatica HOM05D005196 ORTHO05D006107 2.8e-21 105.1 77 72.7
Ah.12g051910 Amaranthus hybridus HOM05D005196 ORTHO05D006107 3.7e-21 104.8 80 68.8
MSTRG.13860 Avicennia marina HOM05D005196 ORTHO05D006107 3.7e-21 104.8 77 72.7
AUR62019751 Chenopodium quinoa HOM05D005196 ORTHO05D006107 3.7e-21 104.8 74 74.3
LjContig00312_ERROPOS870357g0014232 Lotus japonicus HOM05D005196 ORTHO05D006107 3.7e-21 104.8 77 71.4
Sabra01G0074500 Salix brachista HOM05D005196 ORTHO05D006107 3.7e-21 104.8 77 74.0
SGA_v2.0_scaffold144G35903 Striga asiatica HOM05D005196 ORTHO05D006107 3.7e-21 104.8 77 72.7
Eucgr.E00780 Eucalyptus grandis HOM05D005196 ORTHO05D006107 6.3e-21 104.0 77 71.4
C04p29780 Brassica napus HOM05D005196 ORTHO05D006107 8.2e-21 103.6 75 70.7
Manes.02G017610 Manihot esculenta HOM05D005196 ORTHO05D006107 8.2e-21 103.6 77 70.1
Os02g0680600 Oryza sativa ssp. japonica HOM05D005196 ORTHO05D006107 8.2e-21 103.6 77 72.7
BcaC02g10359 Brassica carinata HOM05D005196 ORTHO05D006107 1.1e-20 103.2 75 69.3
HPP92_025411 Vanilla planifolia HOM05D005196 ORTHO05D006107 1.1e-20 103.2 77 70.1
THA.LOC104809368 Tarenaya hassleriana HOM05D005196 ORTHO05D006107 1.8e-20 102.4 77 70.1
Rhsim02G0235500 Rhododendron simsii HOM05D005196 ORTHO05D006107 4.1e-20 101.3 77 70.1
SEGI_33828 Sequoiadendron giganteum HOM05D005196 ORTHO05D006107 5.3e-20 100.9 77 70.1
Sed0007168 Sechium edule HOM05D005196 ORTHO05D006107 1.5e-19 99.4 78 70.5
TAR629G1542 Trochodendron aralioides HOM05D005196 ORTHO05D006107 1.5e-19 99.4 70 77.1
Mapoly0107s0035 Marchantia polymorpha HOM05D005196 ORTHO05D006107 2.6e-19 98.6 77 70.1
Pp3c3_18960 Physcomitrium patens HOM05D005196 ORTHO05D006107 2.6e-19 98.6 77 68.8
SMO118G0129 Selaginella moellendorffii HOM05D005196 ORTHO05D006107 3.4e-19 98.2 77 67.5
Cre12.g503550 Chlamydomonas reinhardtii HOM05D005196 ORTHO05D006107 3.2e-17 91.7 77 62.3
ECA240G2051 Erigeron canadensis HOM05D000662 ORTHO05D000597 2.1e-16 89.0 64 73.4
MCO02G159 Micromonas commoda HOM05D005196 ORTHO05D006107 1.0e-15 86.7 91 49.5
CBR_g41628 Chara braunii HOM05D005196 ORTHO05D006107 3.0e-15 85.1 77 58.4
Sc01g0009830 Simmondsia chinensis HOM05D005196 ORTHO05D006107 1.1e-14 83.2 66 65.2
PRCOL_00001316 Prasinoderma coloniale HOM05D005196 ORTHO05D006107 4.3e-14 81.3 81 48.1
Eucgr.L03318 Eucalyptus grandis HOM05D005196 ORTHO05D006107 4.8e-13 77.8 53 69.8
PSO782G0193 Papaver somniferum HOM05D005196 ORTHO05D006107 1.1e-12 76.6 79 53.2
vmacro11408 Vaccinium macrocarpon HOM05D005196 ORTHO05D006107 5.3e-12 74.3 62 67.7
Dinv37598 Davidia involucrata HOM05D005196 ORTHO05D006107 6.9e-12 73.9 43 81.4
Gohir.A08G114450 Gossypium hirsutum HOM05D005196 ORTHO05D006107 6.9e-12 73.9 47 74.5
SEGI_11641 Sequoiadendron giganteum HOM05D005196 ORTHO05D006107 6.5e-10 67.4 71 53.5
BolC4t24512H Brassica oleracea HOM05D005196 ORTHO05D006107 7.2e-09 63.9 64 59.4


User provided reference genes

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