Gene: AT1G63970

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G63970
  • Transcript Identifier AT1G63970.1
  • Gene Type Coding gene
  • Location Chr1 : 23738923-23740336 : negative

Gene Family Information

  • ID HOM05D005196
  • #Genes/#Species 145/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G63970.1
  • symbol ISPF
  • Alias MECPS,2C-METHYL-D-ERYTHRITOL 2,4-CYCLODIPHOSPHATE SYNTHASE
  • uniprot Q9CAK8

Descriptions

  • Description isoprenoid F
  • Computational description isoprenoid F (ISPF); FUNCTIONS IN: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity; INVOLVED IN: chlorophyll biosynthetic process, carotenoid biosynthetic process, response to light stimulus, isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site (InterPro:IPR020555), 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, core (InterPro:IPR003526); Has 6473 Blast hits to 6472 proteins in 2098 species: Archae - 0; Bacteria - 4326; Metazoa - 0; Fungi - 4; Plants - 64; Viruses - 0; Other Eukaryotes - 2079 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016114
IEA
GOA Databaseterpenoid biosynthetic process
GO:0016114
IEA
InterProterpenoid biosynthetic process
GO:0008299
IEA
GOA Databaseisoprenoid biosynthetic process
GO:0016117
IMP
Gene Ontologycarotenoid biosynthetic process1
GO:0015995
IMP
Gene Ontologychlorophyll biosynthetic process1
GO:0019288
IEA
Gene Ontologyisopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008685
IEA
GOA Database2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
GO:0008685
IGI
IBA
Gene Ontology2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity1 2
GO:0008685
IEA
InterPro2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
GO:0016829
IEA
GOA Databaselyase activity
GO:0046872
IEA
GOA Databasemetal ion binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009570
IDA
IEA
GOA Databasechloroplast stroma
GO:0009570
HDA
Gene Ontologychloroplast stroma3
GO:0009507
IDA
IEA
GOA Databasechloroplast
GO:0009507
HDA
ISM
Gene Ontologychloroplast4
GO:0009536
IEA
GOA Databaseplastid

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily
Mapman id Description
9.1.2.6 Secondary metabolism.terpenoids.methylerythritol phosphate (MEP) pathway.2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase