Gene: COL.COLO4_08364

General Information

Structural Information

  • Species Corchorus olitorius
  • Gene Identifier COL.COLO4_08364
  • Transcript Identifier COL.rna7166
  • Gene Type Coding gene
  • Location AWUE01013723.1 : 25520-28511 : positive

Gene Family Information

  • ID HOM05D005196
  • #Genes/#Species 145/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna7166
  • GenBank OMP06075.1
  • id gene8336
  • gene_name COLO4_08364
  • uniprot A0A1R3KG68

Descriptions

  • Description 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0019288
IEA
GOA Databaseisopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
GO:0008299
IEA
GOA Databaseisoprenoid biosynthetic process
GO:0016114
IEA
GOA Databaseterpenoid biosynthetic process
GO:0016114
IEA
InterProterpenoid biosynthetic process
GO:0015995
ISO
PLAZA Integrative Orthologychlorophyll biosynthetic process AT1G63970
GO:0016117
ISO
PLAZA Integrative Orthologycarotenoid biosynthetic process AT1G63970

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008685
IEA
GOA Database2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
GO:0008685
IEA
InterPro2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0016829
IEA
GOA Databaselyase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009570
ISO
PLAZA Integrative Orthologychloroplast stroma AT1G63970
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT1G63970

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily
IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
Mapman id Description
9.1.2.6 Secondary metabolism.terpenoids.methylerythritol phosphate (MEP) pathway.2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase