Gene: Sopen08g029880

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen08g029880
  • Transcript Identifier Sopen08g029880.1
  • Gene Type Coding gene
  • Location Spenn-ch08 : 69172728-69177167 : negative

Gene Family Information

  • ID HOM05D005196
  • #Genes/#Species 145/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen08g029880.1

Descriptions

  • Description 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplast precursor (EC 4.6.1.12) (MECPS) (MECDP-synthase) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle), Encodes a protein with 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity. The proteins activity was confirmed by heterologous expression of phenotypic complementation of the E. coli ispF mutant. Plants defective in this gene display an albino lethal phenotype. | isoprenoid F (ISPF) | FUNCTIONS IN: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity | INVOLVED IN: chlorophyll biosynthetic process, carotenoid biosynthetic process, response to light stimulus, isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway | LOCATED IN: chloroplast | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, core
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016114
IEA
InterProterpenoid biosynthetic process
GO:0015995
ISO
PLAZA Integrative Orthologychlorophyll biosynthetic process AT1G63970
GO:0016117
ISO
PLAZA Integrative Orthologycarotenoid biosynthetic process AT1G63970

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008685
IEA
InterPro2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009570
ISO
PLAZA Integrative Orthologychloroplast stroma AT1G63970
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT1G63970

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily
Mapman id Description
9.1.2.6 Secondary metabolism.terpenoids.methylerythritol phosphate (MEP) pathway.2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase