Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0017442 Camellia sinensis var. sinensis HOM05D001670 ORTHO05D010670 3.5e-106 388.3 194 100.0
Rhsim01G0135600 Rhododendron simsii HOM05D001670 ORTHO05D002980 1.8e-81 306.2 182 81.3
vmacro21039 Vaccinium macrocarpon HOM05D001670 ORTHO05D002980 9.1e-78 293.9 182 78.6
CSS0045110 Camellia sinensis var. sinensis HOM05D001670 ORTHO05D002980 2.9e-76 288.9 173 80.9
Cc02_g24610 Coffea canephora HOM05D001670 ORTHO05D002980 5.2e-73 278.1 182 76.9
Gorai.008G107100 Gossypium raimondii HOM05D001670 ORTHO05D002980 5.7e-72 274.6 181 71.3
CAN.G899.12 Capsicum annuum HOM05D001670 ORTHO05D002980 1.7e-71 273.1 182 74.7
Duzib133G0195 Durio zibethinus HOM05D001670 ORTHO05D002980 4.8e-71 271.6 182 69.2
Gohir.A12G095700 Gossypium hirsutum HOM05D001670 ORTHO05D002980 4.8e-71 271.6 181 70.2
COL.COLO4_12469 Corchorus olitorius HOM05D001670 ORTHO05D002980 1.1e-70 270.4 184 69.0
Gohir.D12G098300 Gossypium hirsutum HOM05D001670 ORTHO05D002980 1.1e-70 270.4 181 70.2
Atru.chr5.219 Acer truncatum HOM05D001670 ORTHO05D002980 4.1e-70 268.5 172 73.3
Thecc.01G385600 Theobroma cacao HOM05D001670 ORTHO05D002980 4.1e-70 268.5 182 69.2
Gohir.A11G078000 Gossypium hirsutum HOM05D001670 ORTHO05D002980 9.1e-70 267.3 182 68.7
Solyc01g090780.3 Solanum lycopersicum HOM05D001670 ORTHO05D002980 9.1e-70 267.3 182 74.7
Sopen01g036510 Solanum pennellii HOM05D001670 ORTHO05D002980 9.1e-70 267.3 182 74.7
Gorai.007G088100 Gossypium raimondii HOM05D001670 ORTHO05D002980 1.2e-69 266.9 182 69.2
Gohir.D11G082333 Gossypium hirsutum HOM05D001670 ORTHO05D002980 1.6e-69 266.5 182 68.7
Gohir.D11G082400 Gossypium hirsutum HOM05D001670 ORTHO05D002980 1.6e-69 266.5 182 68.7
SGA_v2.0_scaffold153G36957 Striga asiatica HOM05D001670 ORTHO05D002980 7.7e-69 264.2 173 75.1
Ciclev10018430m.g Citrus clementina HOM05D001670 ORTHO05D002980 1.0e-68 263.8 173 72.3
Hma1.2p1_0341F.1_g130260 Hydrangea macrophylla HOM05D001670 ORTHO05D002980 1.0e-68 263.8 173 76.3
Peaxi162Scf00377g00038 Petunia axillaris HOM05D001670 ORTHO05D002980 1.0e-68 263.8 185 73.5
CANSAT21G0618 Cannabis sativa HOM05D001670 ORTHO05D002980 1.7e-68 263.1 173 74.0
MD07G1112500 Malus domestica HOM05D001670 ORTHO05D002980 2.2e-68 262.7 182 70.9
Cpa.g.sc587.1 Carica papaya HOM05D001670 ORTHO05D002980 2.9e-68 262.3 182 69.2
Prupe.2G135900 Prunus persica HOM05D001670 ORTHO05D002980 1.1e-67 260.4 182 69.2
GSVIVG01018178001 Vitis vinifera HOM05D001670 ORTHO05D002980 1.1e-67 260.4 173 72.3
RcHm_v2.0_Chr1g0348711 Rosa chinensis HOM05D001670 ORTHO05D002980 1.5e-67 260.0 182 69.8
MSTRG.20721 Avicennia marina HOM05D001670 ORTHO05D002980 1.9e-67 259.6 173 75.1
MELO3C005963.2 Cucumis melo HOM05D001670 ORTHO05D002980 1.9e-67 259.6 182 70.3
CsaV3_3G007410 Cucumis sativus L. HOM05D001670 ORTHO05D002980 1.9e-67 259.6 182 70.3
SalBow5G2000 Salvia bowleyana HOM05D001670 ORTHO05D002980 1.9e-67 259.6 173 75.1
ClCG05G000260 Citrullus lanatus HOM05D001670 ORTHO05D002980 2.5e-67 259.2 181 70.7
Nn6g33938 Nelumbo nucifera HOM05D001670 ORTHO05D002980 2.5e-67 259.2 182 70.9
Lj7C538T12 Lonicera japonica HOM05D001670 ORTHO05D002980 3.2e-67 258.8 183 70.5
Duzib268G0141 Durio zibethinus HOM05D001670 ORTHO05D002980 5.5e-67 258.1 182 66.5
Nitab4.5_0000706g0120 Nicotiana tabacum HOM05D001670 ORTHO05D002980 5.5e-67 258.1 195 70.3
SGA_v2.0_scaffold399G50813 Striga asiatica HOM05D001670 ORTHO05D002980 5.5e-67 258.1 173 74.0
QL04p035871 Quercus lobata HOM05D001670 ORTHO05D002980 1.2e-66 256.9 182 72.0
Eucgr.E01609 Eucalyptus grandis HOM05D001670 ORTHO05D002980 1.6e-66 256.5 173 68.8
THA.LOC104801485 Tarenaya hassleriana HOM05D001670 ORTHO05D002980 2.1e-66 256.1 182 69.8
TWI14G1227 Tripterygium wilfordii HOM05D001670 ORTHO05D002980 2.1e-66 256.1 173 69.9
Lalb_Chr13g0290371 Lupinus albus HOM05D001670 ORTHO05D002980 2.7e-66 255.8 182 69.2
Manes.05G050200 Manihot esculenta HOM05D001670 ORTHO05D002980 1.0e-65 253.8 173 72.3
TAR629G1646 Trochodendron aralioides HOM05D001670 ORTHO05D002980 1.0e-65 253.8 184 68.5
Oeu000038.3 Olea europaea HOM05D001670 ORTHO05D002980 1.8e-65 253.1 173 73.4
Nitab4.5_0002304g0030 Nicotiana tabacum HOM05D001670 ORTHO05D002980 3.0e-65 252.3 182 73.6
PSO104G0201 Papaver somniferum HOM05D001670 ORTHO05D002980 3.0e-65 252.3 184 66.8
PGR042G0136 Punica granatum HOM05D001670 ORTHO05D002980 3.0e-65 252.3 173 66.5
Lalb_Chr07g0195691 Lupinus albus HOM05D001670 ORTHO05D002980 4.0e-65 251.9 173 71.1
Oeu064576.1 Olea europaea HOM05D001670 ORTHO05D002980 4.0e-65 251.9 173 73.4
Potri.014G058800 Populus trichocarpa HOM05D001670 ORTHO05D002980 4.0e-65 251.9 173 72.3
Sed0002470 Sechium edule HOM05D001670 ORTHO05D002980 5.2e-65 251.5 182 68.7
THA.LOC104814077 Tarenaya hassleriana HOM05D001670 ORTHO05D002980 8.8e-65 250.8 182 67.0
TAR375G0686 Trochodendron aralioides HOM05D001670 ORTHO05D002980 8.8e-65 250.8 185 68.6
MD02G1214300 Malus domestica HOM05D001670 ORTHO05D002980 2.0e-64 249.6 182 67.6
FAN03G2300 Fragaria x ananassa HOM05D001670 ORTHO05D002980 2.6e-64 249.2 173 71.1
PSO017G3667 Papaver somniferum HOM05D001670 ORTHO05D002980 3.4e-64 248.8 184 64.7
TWI59G0301 Tripterygium wilfordii HOM05D001670 ORTHO05D002980 4.4e-64 248.4 173 68.2
FAN10G2564 Fragaria x ananassa HOM05D001670 ORTHO05D002980 7.5e-64 247.7 173 69.9
Sp1g00220 Schrenkiella parvula HOM05D001670 ORTHO05D002980 7.5e-64 247.7 174 68.4
Psat4g209400 Pisum sativum HOM05D001670 ORTHO05D002980 9.8e-64 247.3 173 68.8
Glyma.03G118400 Glycine max HOM05D001670 ORTHO05D002980 1.3e-63 246.9 182 69.2
Cfa011137 Carpinus fangiana HOM05D001670 ORTHO05D002980 1.7e-63 246.5 176 68.2
FAN10G0390 Fragaria x ananassa HOM05D001670 ORTHO05D002980 1.7e-63 246.5 173 69.9
Lj3g0005567 Lotus japonicus HOM05D001670 ORTHO05D002980 2.2e-63 246.1 182 67.0
Medtr8g005820 Medicago truncatula HOM05D001670 ORTHO05D002980 2.2e-63 246.1 182 67.6
BcaC07g42342 Brassica carinata HOM05D001670 ORTHO05D002980 2.8e-63 245.7 174 67.2
DCAR_015867 Daucus carota HOM05D001670 ORTHO05D002980 2.8e-63 245.7 182 70.3
FvH4_7g10770 Fragaria vesca HOM05D001670 ORTHO05D002980 2.8e-63 245.7 173 69.9
FAN01G0667 Fragaria x ananassa HOM05D001670 ORTHO05D002980 2.8e-63 245.7 173 69.4
FAN06G1683 Fragaria x ananassa HOM05D001670 ORTHO05D002980 2.8e-63 245.7 173 69.9
PSO421G0693 Papaver somniferum HOM05D001670 ORTHO05D002980 2.8e-63 245.7 184 66.3
Haze_02720 Corylus avellana HOM05D001670 ORTHO05D002980 3.7e-63 245.4 169 72.2
C06p20660 Brassica napus HOM05D001670 ORTHO05D002980 6.3e-63 244.6 182 65.4
BolC6t37249H Brassica oleracea HOM05D001670 ORTHO05D002980 6.3e-63 244.6 182 65.4
Potri.002G143000 Populus trichocarpa HOM05D001670 ORTHO05D002980 8.3e-63 244.2 173 69.9
VMungo0331G0876 Vigna mungo HOM05D001670 ORTHO05D002980 8.3e-63 244.2 182 68.1
CiPaw.14G024400 Carya illinoinensis HOM05D001670 ORTHO05D002980 1.1e-62 243.8 183 66.7
FAN06G0311 Fragaria x ananassa HOM05D001670 ORTHO05D002980 2.4e-62 242.7 173 69.4
TPR.G28734 Trifolium pratense HOM05D001670 ORTHO05D002980 2.4e-62 242.7 182 65.9
BraA09t42277Z Brassica rapa HOM05D001670 ORTHO05D002980 3.1e-62 242.3 172 67.4
PSO170G5961 Papaver somniferum HOM05D001670 ORTHO05D002980 3.1e-62 242.3 185 64.3
Phvul.010G056800 Phaseolus vulgaris HOM05D001670 ORTHO05D002980 3.1e-62 242.3 182 67.0
BcaB02g07859 Brassica carinata HOM05D001670 ORTHO05D002980 4.1e-62 241.9 182 63.7
Ca_23116_v3 Cicer arietinum L. HOM05D001670 ORTHO05D002980 5.4e-62 241.5 182 65.9
Lsat_1_v5_gn_7_10221 Lactuca sativa HOM05D001670 ORTHO05D002980 5.4e-62 241.5 177 68.4
AL1G10200 Arabidopsis lyrata HOM05D001670 ORTHO05D002980 7.0e-62 241.1 172 66.9
BcaB03g13629 Brassica carinata HOM05D001670 ORTHO05D002980 7.0e-62 241.1 174 66.1
A07p21180 Brassica napus HOM05D001670 ORTHO05D002980 7.0e-62 241.1 182 64.3
BraA07t29805Z Brassica rapa HOM05D001670 ORTHO05D002980 7.0e-62 241.1 182 64.3
Manes.01G270100 Manihot esculenta HOM05D001670 ORTHO05D002980 7.0e-62 241.1 173 68.8
Carub.0001s0015 Capsella rubella HOM05D001670 ORTHO05D002980 9.1e-62 240.7 174 66.1
CiPaw.13G031300 Carya illinoinensis HOM05D001670 ORTHO05D002980 9.1e-62 240.7 177 66.7
Sabra02G0111500 Salix brachista HOM05D001670 ORTHO05D002980 9.1e-62 240.7 182 65.9
Glyma.07G108700 Glycine max HOM05D001670 ORTHO05D002980 1.2e-61 240.4 182 67.6
A10p00140 Brassica napus HOM05D001670 ORTHO05D002980 2.7e-61 239.2 174 65.5
C05p00130 Brassica napus HOM05D001670 ORTHO05D002980 2.7e-61 239.2 174 65.5
BraA10t42293Z Brassica rapa HOM05D001670 ORTHO05D002980 2.7e-61 239.2 174 65.5
Migut.B01578 Erythranthe guttata HOM05D001670 ORTHO05D002980 2.7e-61 239.2 172 68.0
Thhalv10006521m.g Eutrema salsugineum HOM05D001670 ORTHO05D002980 2.7e-61 239.2 172 65.7
Dinv06565 Davidia involucrata HOM05D001670 ORTHO05D002980 7.7e-61 237.7 184 64.1
ECA236G0609 Erigeron canadensis HOM05D001670 ORTHO05D002980 1.0e-60 237.3 173 68.2
C08p54070 Brassica napus HOM05D001670 ORTHO05D002980 1.3e-60 236.9 172 65.7
BolC8t52916H Brassica oleracea HOM05D001670 ORTHO05D002980 1.3e-60 236.9 172 65.7
BcaNung05287 Brassica carinata HOM05D001670 ORTHO05D002980 2.9e-60 235.7 174 64.9
BolC5t28803H Brassica oleracea HOM05D001670 ORTHO05D002980 2.9e-60 235.7 174 64.9
AT1G02080 Arabidopsis thaliana HOM05D001670 ORTHO05D002980 3.8e-60 235.3 193 61.1
BcaC08g44594 Brassica carinata HOM05D001670 ORTHO05D002980 8.5e-60 234.2 182 63.7
CDE11G1219 Ceratophyllum demersum HOM05D001670 ORTHO05D002980 8.5e-60 234.2 176 64.8
GSVIVG01000874001 Vitis vinifera HOM05D001670 ORTHO05D002980 8.5e-60 234.2 174 66.7
arahy.Tifrunner.gnm1.ann1.1V1Y36 Arachis hypogaea HOM05D001670 ORTHO05D002980 4.2e-59 231.9 182 63.7
arahy.Tifrunner.gnm1.ann1.5NE8AH Arachis hypogaea HOM05D001670 ORTHO05D002980 4.2e-59 231.9 182 63.7
Hund27384 Selenicereus undatus HOM05D001670 ORTHO05D002980 4.2e-59 231.9 182 65.9
DCAR_025093 Daucus carota HOM05D001670 ORTHO05D002980 9.4e-59 230.7 182 67.6
HanXRQChr04g0123421 Helianthus annuus HOM05D001670 ORTHO05D002980 2.1e-58 229.6 177 65.0
EL10Ac1g00822 Beta vulgaris HOM05D001670 ORTHO05D002980 3.6e-58 228.8 173 64.7
CARHR000250 Cardamine hirsuta HOM05D001670 ORTHO05D002980 6.1e-58 228.0 178 63.5
Oeu061519.1 Olea europaea HOM05D001670 ORTHO05D002980 1.8e-57 226.5 193 61.1
Glyma.03G118200 Glycine max HOM05D001670 ORTHO05D002980 5.2e-57 224.9 181 63.0
Sc13g0006690 Simmondsia chinensis HOM05D001670 ORTHO05D002980 1.2e-56 223.8 162 68.5
Aa31LG1G11410 Aethionema arabicum HOM05D001670 ORTHO05D002980 5.7e-56 221.5 174 62.1
HanXRQChr06g0168951 Helianthus annuus HOM05D001670 ORTHO05D002980 3.7e-55 218.8 176 63.1
AUR62013711 Chenopodium quinoa HOM05D001670 ORTHO05D002980 4.9e-55 218.4 182 63.2
AUR62004150 Chenopodium quinoa HOM05D001670 ORTHO05D002980 6.3e-55 218.0 182 63.2
Atru.chr1.760 Acer truncatum HOM05D001670 ORTHO05D002980 1.4e-54 216.9 173 60.7
ATR0317G075 Amborella trichopoda HOM05D001670 ORTHO05D002980 6.6e-52 208.0 183 58.5
HPP92_007431 Vanilla planifolia HOM05D001670 ORTHO05D002980 1.6e-50 203.4 185 58.9
Dinv44111 Davidia involucrata HOM05D001670 ORTHO05D002980 5.2e-49 198.4 181 59.7
Ah.05g173600 Amaranthus hybridus HOM05D001670 ORTHO05D002980 2.0e-48 196.4 182 57.1
Aqoxy7G00778 Aquilegia oxysepala HOM05D001670 ORTHO05D002980 7.5e-48 194.5 182 57.1
Actinidia24999 Actinidia chinensis HOM05D001670 ORTHO05D002980 9.8e-48 194.1 176 55.7
Aqoxy6G02523 Aquilegia oxysepala HOM05D001670 ORTHO05D002980 9.8e-48 194.1 182 57.1
Mapoly0037s0011 Marchantia polymorpha HOM05D001670 ORTHO05D002980 9.8e-48 194.1 184 53.8
Duzib068G1107 Durio zibethinus HOM05D001670 ORTHO05D002980 1.7e-47 193.4 178 57.9
Pp3c21_18770 Physcomitrium patens HOM05D001670 ORTHO05D002980 1.1e-46 190.7 176 53.4
Thecc.03G154100 Theobroma cacao HOM05D001670 ORTHO05D002980 1.1e-46 190.7 174 56.9
Zm00001eb000340 Zea mays HOM05D001670 ORTHO05D002980 3.2e-46 189.1 180 55.0
Os10g0556700 Oryza sativa ssp. japonica HOM05D001670 ORTHO05D002980 4.1e-46 188.7 175 54.3
Zm00001eb404410 Zea mays HOM05D001670 ORTHO05D002980 3.5e-45 185.7 180 52.8
C09p00060 Brassica napus HOM05D001670 ORTHO05D002980 1.3e-44 183.7 178 53.9
BraA09t35680Z Brassica rapa HOM05D001670 ORTHO05D002980 1.3e-44 183.7 178 53.9
Rhsim03G0166300 Rhododendron simsii HOM05D001670 ORTHO05D002980 3.6e-42 175.6 173 50.3
Os03g0102366 Oryza sativa ssp. japonica HOM05D001670 ORTHO05D002980 6.2e-42 174.9 180 50.6
Lsat_1_v5_gn_4_44320 Lactuca sativa HOM05D001670 ORTHO05D002980 4.4e-40 168.7 172 52.9
CBR_g37673 Chara braunii HOM05D001670 ORTHO05D002980 3.7e-39 165.6 186 47.8
Pp3c5_6540 Physcomitrium patens HOM05D001670 ORTHO05D002980 1.4e-38 163.7 177 49.7
MD07G1112700 Malus domestica HOM05D001670 ORTHO05D010670 7.0e-38 161.4 126 67.5
Lj9C563G7 Lonicera japonica HOM05D001670 ORTHO05D002980 9.2e-38 161.0 181 48.6
SMO340G0305 Selaginella moellendorffii HOM05D001670 ORTHO05D002980 5.0e-36 155.2 182 47.3
Lj5A710T19 Lonicera japonica HOM05D001670 ORTHO05D015222 1.7e-31 140.2 172 47.7
AagrBONN_evm.TU.Sc2ySwM_362.1757 Anthoceros agrestis HOM05D001670 ORTHO05D002980 1.2e-29 134.0 169 42.0
Hund17061 Selenicereus undatus HOM05D001670 ORTHO05D002980 6.0e-29 131.7 189 41.8
BcaNung05010 Brassica carinata HOM05D001670 ORTHO05D010670 5.1e-28 128.6 100 61.0
SHI13577 Sapria himalayana HOM05D001670 ORTHO05D010670 1.8e-25 120.2 171 41.5
MCO11G155 Micromonas commoda HOM05D001670 ORTHO05D002980 2.0e-24 116.7 182 38.5
Actinidia20645 Actinidia chinensis HOM05D001670 ORTHO05D010670 7.6e-24 114.8 77 74.0
arahy.Tifrunner.gnm1.ann1.ZN4AW4 Arachis hypogaea HOM05D001670 ORTHO05D010670 1.3e-23 114.0 91 58.2
MBI04_g09509_MAGBIO Magnolia biondii HOM05D001670 ORTHO05D002980 1.4e-22 110.5 164 39.6
Pp3c6_26730 Physcomitrium patens HOM05D001670 ORTHO05D002980 5.4e-22 108.6 133 44.4
Actinidia20637 Actinidia chinensis HOM05D001670 ORTHO05D010670 9.2e-22 107.8 67 79.1
HanXRQChr16g0519711 Helianthus annuus HOM05D001670 ORTHO05D002980 1.2e-21 107.5 105 54.3
PRCOL_00002164 Prasinoderma coloniale HOM05D001670 ORTHO05D002980 2.3e-20 103.2 195 33.3
ECA234G0500 Erigeron canadensis HOM05D001670 ORTHO05D002980 3.0e-20 102.8 140 41.4
CSS0049488 Camellia sinensis var. sinensis HOM05D001670 ORTHO05D002980 1.5e-19 100.5 117 50.4
Lsat_1_v5_gn_5_84901 Lactuca sativa HOM05D001670 ORTHO05D010670 1.2e-18 97.4 106 49.1
Actinidia20641 Actinidia chinensis HOM05D001670 ORTHO05D010670 1.4e-17 94.0 92 59.8
arahy.Tifrunner.gnm1.ann1.A8401K Arachis hypogaea HOM05D001670 ORTHO05D015222 2.6e-16 89.7 148 37.2
Cre14.g632950 Chlamydomonas reinhardtii HOM05D001670 ORTHO05D002980 6.4e-15 85.1 230 27.8
Lsat_1_v5_gn_4_127280 Lactuca sativa HOM05D000425 ORTHO05D000373 3.3e-11 72.8 47 68.1
MBI15_g29839_MAGBIO Magnolia biondii HOM05D001670 ORTHO05D010670 2.1e-10 70.1 51 62.7
MBI15_g34611_MAGBIO Magnolia biondii HOM05D001670 ORTHO05D010670 2.1e-10 70.1 53 60.4
MBI08_g34222_MAGBIO Magnolia biondii HOM05D000942 ORTHO05D010670 3.6e-10 69.3 51 62.7
Actinidia00128 Actinidia chinensis HOM05D001670 ORTHO05D015222 8.1e-10 68.2 47 70.2
MBI16_g16201_MAGBIO Magnolia biondii HOM05D001670 ORTHO05D010670 1.4e-09 67.4 51 58.8
CSS0010935 Camellia sinensis var. sinensis HOM05D001670 ORTHO05D010670 9.0e-09 64.7 90 43.3
Actinidia20644 Actinidia chinensis HOM05D001670 ORTHO05D015800 9.9e-08 61.2 34 76.5
GSVIVG01036355001 Vitis vinifera HOM05D001670 ORTHO05D010670 1.7e-07 60.5 45 68.9


User provided reference genes

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