Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0017090 Camellia sinensis var. sinensis HOM05D006124 ORTHO05D007854 1.9e-256 888.6 438 100.0
Actinidia07118 Actinidia chinensis HOM05D006124 ORTHO05D007854 8.0e-231 803.5 436 89.9
Rhsim08G0043400 Rhododendron simsii HOM05D006124 ORTHO05D007854 1.2e-226 789.6 426 92.0
vmacro03179 Vaccinium macrocarpon HOM05D006124 ORTHO05D007854 5.0e-225 784.3 426 90.4
Dinv30520 Davidia involucrata HOM05D006124 ORTHO05D007854 1.8e-219 765.8 432 87.5
Hma1.2p1_0002F.1_g001970 Hydrangea macrophylla HOM05D006124 ORTHO05D007854 4.5e-218 761.1 436 86.0
GSVIVG01025154001 Vitis vinifera HOM05D006124 ORTHO05D007854 9.8e-213 743.4 436 84.9
QL01p023235 Quercus lobata HOM05D006124 ORTHO05D007854 4.5e-210 734.6 422 83.2
Cfa012640 Carpinus fangiana HOM05D006124 ORTHO05D007854 9.5e-208 726.9 428 82.9
Haze_08019 Corylus avellana HOM05D006124 ORTHO05D007854 4.7e-207 724.5 429 83.0
Cc01_g01430 Coffea canephora HOM05D006124 ORTHO05D007854 6.1e-207 724.2 428 84.8
MBI18_g17017_MAGBIO Magnolia biondii HOM05D006124 ORTHO05D007854 3.7e-204 714.9 427 83.1
HanXRQChr02g0055911 Helianthus annuus HOM05D006124 ORTHO05D007854 1.4e-203 713.0 422 82.2
Lsat_1_v5_gn_6_46340 Lactuca sativa HOM05D006124 ORTHO05D007854 1.0e-201 706.8 399 83.0
Cpa.g.sc139.77 Carica papaya HOM05D006124 ORTHO05D007854 1.3e-201 706.4 429 80.4
CANSAT54G1697 Cannabis sativa HOM05D006124 ORTHO05D007854 3.0e-201 705.3 428 80.1
Eucgr.J00945 Eucalyptus grandis HOM05D006124 ORTHO05D007854 6.6e-201 704.1 428 80.4
Thecc.09G259100 Theobroma cacao HOM05D006124 ORTHO05D007854 8.6e-201 703.7 393 84.0
Duzib150G0641 Durio zibethinus HOM05D006124 ORTHO05D007854 6.2e-199 697.6 394 83.5
Nn7g36111 Nelumbo nucifera HOM05D006124 ORTHO05D007854 6.2e-199 697.6 423 81.6
Nitab4.5_0000214g0090 Nicotiana tabacum HOM05D006124 ORTHO05D007854 6.2e-199 697.6 426 79.6
COL.COLO4_05187 Corchorus olitorius HOM05D006124 ORTHO05D007854 8.9e-198 693.7 384 84.9
Solyc04g054700.3 Solanum lycopersicum HOM05D006124 ORTHO05D007854 1.2e-197 693.3 428 79.0
Prupe.6G097100 Prunus persica HOM05D006124 ORTHO05D007854 2.0e-197 692.6 421 82.2
PSO384G4530 Papaver somniferum HOM05D006124 ORTHO05D007854 2.6e-197 692.2 413 80.9
Atru.chr3.3681 Acer truncatum HOM05D006124 ORTHO05D007854 3.4e-197 691.8 430 78.4
FAN25G1144 Fragaria x ananassa HOM05D006124 ORTHO05D007854 5.8e-197 691.0 421 80.8
CsaV3_5G005370 Cucumis sativus L. HOM05D006124 ORTHO05D007854 7.5e-197 690.6 419 79.2
PSO541G0641 Papaver somniferum HOM05D006124 ORTHO05D007854 9.8e-197 690.3 399 81.5
MELO3C005421.2 Cucumis melo HOM05D006124 ORTHO05D007854 1.3e-196 689.9 419 79.5
Gohir.D09G102900 Gossypium hirsutum HOM05D006124 ORTHO05D007854 1.3e-196 689.9 420 79.0
Aqoxy5G00340 Aquilegia oxysepala HOM05D006124 ORTHO05D007854 1.7e-196 689.5 416 80.0
Gohir.A09G106200 Gossypium hirsutum HOM05D006124 ORTHO05D007854 1.7e-196 689.5 420 80.2
Gorai.006G120700 Gossypium raimondii HOM05D006124 ORTHO05D007854 1.7e-196 689.5 420 80.2
PSO339G3674 Papaver somniferum HOM05D006124 ORTHO05D007854 1.7e-196 689.5 413 80.6
Peaxi162Scf00876g00022 Petunia axillaris HOM05D006124 ORTHO05D007854 1.7e-196 689.5 428 80.4
MSTRG.21138 Avicennia marina HOM05D006124 ORTHO05D007854 2.2e-196 689.1 427 80.3
FAN21G3497 Fragaria x ananassa HOM05D006124 ORTHO05D007854 2.9e-196 688.7 421 80.3
RcHm_v2.0_Chr5g0060301 Rosa chinensis HOM05D006124 ORTHO05D007854 2.9e-196 688.7 421 81.0
ClCG01G004970 Citrullus lanatus HOM05D006124 ORTHO05D007854 3.7e-196 688.3 419 80.2
MD03G1112800 Malus domestica HOM05D006124 ORTHO05D007854 3.7e-196 688.3 421 81.7
Migut.D02195 Erythranthe guttata HOM05D006124 ORTHO05D007854 6.4e-196 687.6 426 78.2
FvH4_3g32970 Fragaria vesca HOM05D006124 ORTHO05D007854 6.4e-196 687.6 421 80.3
THA.LOC104801004 Tarenaya hassleriana HOM05D006124 ORTHO05D007854 1.1e-195 686.8 421 78.6
FAN11G0357 Fragaria x ananassa HOM05D006124 ORTHO05D007854 1.4e-195 686.4 421 80.0
ECA233G1948 Erigeron canadensis HOM05D006124 ORTHO05D007854 5.4e-195 684.5 420 80.2
Ciclev10005033m.g Citrus clementina HOM05D006124 ORTHO05D007854 7.0e-195 684.1 423 78.3
Peaxi162Scf00272g00827 Petunia axillaris HOM05D006124 ORTHO05D007854 1.2e-194 683.3 428 79.0
CAN.G219.5 Capsicum annuum HOM05D006124 ORTHO05D007854 2.7e-194 682.2 428 79.0
TWI39G0794 Tripterygium wilfordii HOM05D006124 ORTHO05D007854 2.7e-194 682.2 417 79.9
Ca_08379_v3 Cicer arietinum L. HOM05D006124 ORTHO05D007854 6.0e-194 681.0 423 76.6
EL10Ac5g12347 Beta vulgaris HOM05D006124 ORTHO05D007854 1.0e-193 680.2 433 75.8
TPR.G16093 Trifolium pratense HOM05D006124 ORTHO05D007854 1.3e-193 679.9 426 75.8
Ciclev10011800m.g Citrus clementina HOM05D006124 ORTHO05D007854 2.3e-193 679.1 423 78.5
Lj1g0025688 Lotus japonicus HOM05D006124 ORTHO05D007854 2.3e-193 679.1 423 75.9
Nitab4.5_0004386g0010 Nicotiana tabacum HOM05D006124 ORTHO05D007854 2.3e-193 679.1 416 80.0
Sed0018571 Sechium edule HOM05D006124 ORTHO05D007854 2.3e-193 679.1 424 79.2
CiPaw.05G171100 Carya illinoinensis HOM05D006124 ORTHO05D007854 1.1e-192 676.8 428 78.3
Manes.04G024500 Manihot esculenta HOM05D006124 ORTHO05D007854 1.1e-192 676.8 420 78.8
Sabra04G0071700 Salix brachista HOM05D006124 ORTHO05D007854 4.3e-192 674.9 392 82.4
Lalb_Chr22g0357551 Lupinus albus HOM05D006124 ORTHO05D007854 5.6e-192 674.5 395 78.5
Glyma.19G129000 Glycine max HOM05D006124 ORTHO05D007854 9.5e-192 673.7 426 74.2
A08p36590 Brassica napus HOM05D006124 ORTHO05D007854 1.6e-191 672.9 424 76.2
BraA08t35561Z Brassica rapa HOM05D006124 ORTHO05D007854 1.6e-191 672.9 424 76.2
Potri.004G113700 Populus trichocarpa HOM05D006124 ORTHO05D007854 2.1e-191 672.5 392 81.6
BcaB03g13459 Brassica carinata HOM05D006124 ORTHO05D007854 2.8e-191 672.2 407 78.1
Sp1g03920 Schrenkiella parvula HOM05D006124 ORTHO05D007854 2.8e-191 672.2 409 78.5
Glyma.11G073900 Glycine max HOM05D006124 ORTHO05D007854 3.6e-191 671.8 426 73.9
C08p01730 Brassica napus HOM05D006124 ORTHO05D007854 1.1e-190 670.2 424 75.9
BolC8t46973H Brassica oleracea HOM05D006124 ORTHO05D007854 1.1e-190 670.2 424 75.9
Medtr7g089440 Medicago truncatula HOM05D006124 ORTHO05D007854 1.1e-190 670.2 427 74.5
AT1G05055 Arabidopsis thaliana HOM05D006124 ORTHO05D007854 1.8e-190 669.5 424 76.2
AL1G14800 Arabidopsis lyrata HOM05D006124 ORTHO05D007854 4.0e-190 668.3 405 78.0
arahy.Tifrunner.gnm1.ann1.63AZS3 Arachis hypogaea HOM05D006124 ORTHO05D007854 1.2e-189 666.8 400 78.2
arahy.Tifrunner.gnm1.ann1.M1WJK6 Arachis hypogaea HOM05D006124 ORTHO05D007854 3.4e-189 665.2 400 78.0
SGA_v2.0_scaffold61G21160 Striga asiatica HOM05D006124 ORTHO05D007854 4.4e-189 664.8 444 75.2
Aa31LG1G19730 Aethionema arabicum HOM05D006124 ORTHO05D007854 1.7e-188 662.9 407 77.9
CARHR004500 Cardamine hirsuta HOM05D006124 ORTHO05D007854 2.2e-188 662.5 424 75.5
Thhalv10007730m.g Eutrema salsugineum HOM05D006124 ORTHO05D007854 2.9e-188 662.1 424 75.2
VMungo1383G3228 Vigna mungo HOM05D006124 ORTHO05D007854 8.3e-188 660.6 426 73.0
Lalb_Chr14g0365721 Lupinus albus HOM05D006124 ORTHO05D007854 9.2e-187 657.1 403 76.4
Carub.0001s0430 Capsella rubella HOM05D006124 ORTHO05D007854 2.7e-186 655.6 406 77.1
unitig_21.g20322 Utricularia gibba HOM05D006124 ORTHO05D007854 4.0e-182 641.7 440 71.6
Os04g0508900 Oryza sativa ssp. japonica HOM05D006124 ORTHO05D007854 1.6e-178 629.8 396 76.0
Oeu035057.1 Olea europaea HOM05D006124 ORTHO05D007854 2.1e-178 629.4 384 81.8
CiPaw.13G108300 Carya illinoinensis HOM05D006124 ORTHO05D007854 3.5e-178 628.6 380 81.3
DCAR_015555 Daucus carota HOM05D006124 ORTHO05D007854 1.0e-177 627.1 352 85.2
SalBow3G1513 Salvia bowleyana HOM05D006124 ORTHO05D007854 1.7e-177 626.3 373 81.8
PGR119G0371 Punica granatum HOM05D006124 ORTHO05D007854 8.7e-177 624.0 376 81.6
Zm00001eb077790 Zea mays HOM05D006124 ORTHO05D007854 2.5e-176 622.5 393 76.1
SEGI_32950 Sequoiadendron giganteum HOM05D006124 ORTHO05D007854 5.4e-171 604.7 395 72.2
AUR62021039 Chenopodium quinoa HOM05D006124 ORTHO05D007854 7.1e-171 604.4 351 81.5
AUR62018404 Chenopodium quinoa HOM05D006124 ORTHO05D007854 9.3e-171 604.0 353 81.3
CDE04G2680 Ceratophyllum demersum HOM05D006124 ORTHO05D007854 5.4e-163 578.2 342 81.0
Sopen04g024450 Solanum pennellii HOM05D006124 ORTHO05D007854 1.6e-159 566.6 327 82.6
TAR369G0666 Trochodendron aralioides HOM05D006124 ORTHO05D007854 3.7e-159 565.5 333 81.4
Mapoly0005s0033 Marchantia polymorpha HOM05D006124 ORTHO05D007854 7.6e-157 557.8 395 66.3
Ah.13g077240 Amaranthus hybridus HOM05D006124 ORTHO05D007854 9.9e-157 557.4 320 80.6
Sc06g0010480 Simmondsia chinensis HOM05D006124 ORTHO05D007854 4.2e-155 552.0 323 78.6
Peaxi162Scf00106g02220 Petunia axillaris HOM05D006124 ORTHO05D007854 1.3e-151 540.4 415 68.9
Lj1C682G4 Lonicera japonica HOM05D006124 ORTHO05D007854 6.9e-150 534.6 284 89.8
Pp3c24_6530 Physcomitrium patens HOM05D006124 ORTHO05D007854 9.0e-150 534.3 388 63.1
Phvul.001G121400 Phaseolus vulgaris HOM05D006124 ORTHO05D007854 8.4e-148 527.7 316 76.6
MD11G1132000 Malus domestica HOM05D006124 ORTHO05D007854 3.2e-147 525.8 339 74.3
CBR_g21234 Chara braunii HOM05D006124 ORTHO05D007854 1.6e-143 513.5 413 59.3
ATR0580G285 Amborella trichopoda HOM05D006124 ORTHO05D007854 3.7e-143 512.3 326 72.7
SMO141G0040 Selaginella moellendorffii HOM05D006124 ORTHO05D007854 1.4e-139 500.4 396 57.1
Peaxi162Scf00876g00023 Petunia axillaris HOM05D006124 ORTHO05D007854 4.8e-135 485.3 293 80.9
Psat3g079640 Pisum sativum HOM05D006124 ORTHO05D007854 3.7e-127 459.1 266 78.6
AagrBONN_evm.TU.Sc2ySwM_344.4431 Anthoceros agrestis HOM05D006124 ORTHO05D007854 1.1e-107 394.4 274 62.4
Cre03.g179550 Chlamydomonas reinhardtii HOM05D006124 ORTHO05D007854 3.4e-104 382.9 403 46.9
CAN.G1136.1 Capsicum annuum HOM05D006124 ORTHO05D007854 7.5e-104 381.7 248 73.4
PGSC0003DMG401027913 Solanum tuberosum HOM05D006124 ORTHO05D007854 1.6e-101 374.0 251 75.3
BolC5t29103H Brassica oleracea HOM05D006124 ORTHO05D007854 4.2e-99 365.9 284 65.5
MCO11G183 Micromonas commoda HOM05D006124 ORTHO05D007854 5.7e-96 355.5 403 45.4
Solyc08g028693.1 Solanum lycopersicum HOM05D006124 ORTHO05D007854 9.2e-86 321.6 182 84.1
Haze_26481 Corylus avellana HOM05D006124 ORTHO05D007854 1.1e-81 308.1 392 42.1
Cfa026643 Carpinus fangiana HOM05D006124 ORTHO05D007854 1.8e-65 254.2 448 33.7
PRCOL_00001395 Prasinoderma coloniale HOM05D006124 ORTHO05D007854 8.9e-65 251.9 355 39.2
Lj1A187G25 Lonicera japonica HOM05D006124 ORTHO05D007854 7.6e-64 248.8 325 45.5
HPP92_015146 Vanilla planifolia HOM05D006124 ORTHO05D007854 3.2e-30 137.1 80 76.2
BcaC09g51580 Brassica carinata HOM05D006124 ORTHO05D007854 6.9e-25 119.4 76 73.7
Psat6g235520 Pisum sativum HOM05D006124 ORTHO05D001516 9.0e-25 119.0 81 67.9
Peaxi162Scf00876g00016 Petunia axillaris HOM05D006124 ORTHO05D007854 2.0e-24 117.9 103 66.0
Lj1A682T15 Lonicera japonica HOM05D006124 ORTHO05D007854 6.9e-17 92.8 53 73.6
ClCG03G002310 Citrullus lanatus HOM05D006124 ORTHO05D150439 3.4e-16 90.5 131 40.5
ECA247G2464 Erigeron canadensis HOM05D011992 ORTHO05D008321 1.9e-14 84.7 89 53.9
HPP92_015147 Vanilla planifolia HOM05D006124 ORTHO05D007854 6.1e-13 79.7 61 70.5
RcHm_v2.0_Chr5g0060231 Rosa chinensis HOM05D006124 ORTHO05D007854 2.2e-10 71.2 49 67.3
ECA233G1860 Erigeron canadensis HOM05D000013 ORTHO05D000011 3.8e-07 60.5 89 42.7


User provided reference genes

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