Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0012816 Camellia sinensis var. sinensis HOM05D001486 ORTHO05D004921 3.2e-101 371.7 183 100.0
CSS0037038 Camellia sinensis var. sinensis HOM05D001486 ORTHO05D004921 2.1e-55 219.5 189 65.6
Actinidia12394 Actinidia chinensis HOM05D001486 ORTHO05D004921 1.2e-52 210.3 189 62.4
Actinidia36627 Actinidia chinensis HOM05D001486 ORTHO05D004921 6.2e-52 208.0 189 61.9
Dinv10475 Davidia involucrata HOM05D001486 ORTHO05D004921 5.2e-51 204.9 189 61.4
vmacro10693 Vaccinium macrocarpon HOM05D001486 ORTHO05D004921 5.2e-51 204.9 189 59.8
Rhsim09G0089500 Rhododendron simsii HOM05D001486 ORTHO05D004921 2.2e-49 199.5 189 58.7
GSVIVG01011662001 Vitis vinifera HOM05D001486 ORTHO05D004921 2.9e-49 199.1 186 60.2
Atru.chr11.925 Acer truncatum HOM05D001486 ORTHO05D004921 6.4e-49 198.0 185 61.6
Hma1.2p1_0277F.1_g111740 Hydrangea macrophylla HOM05D001486 ORTHO05D004921 2.4e-48 196.1 189 58.7
Lj3A864G85 Lonicera japonica HOM05D001486 ORTHO05D004921 9.2e-48 194.1 189 57.7
Manes.17G083900 Manihot esculenta HOM05D001486 ORTHO05D004921 9.2e-48 194.1 185 58.4
QL03p035815 Quercus lobata HOM05D001486 ORTHO05D004921 1.2e-47 193.7 183 60.1
Thecc.02G292500 Theobroma cacao HOM05D001486 ORTHO05D004921 1.2e-47 193.7 185 58.4
Ciclev10014036m.g Citrus clementina HOM05D001486 ORTHO05D004921 1.6e-47 193.4 193 57.0
MD13G1020400 Malus domestica HOM05D001486 ORTHO05D004921 2.1e-47 193.0 190 58.4
Prupe.1G333300 Prunus persica HOM05D001486 ORTHO05D004921 4.6e-47 191.8 189 57.1
Sabra08G0102800 Salix brachista HOM05D001486 ORTHO05D004921 4.6e-47 191.8 190 55.8
CiPaw.06G051900 Carya illinoinensis HOM05D001486 ORTHO05D004921 6.0e-47 191.4 183 59.0
MSTRG.2128 Avicennia marina HOM05D001486 ORTHO05D004921 7.8e-47 191.0 191 56.0
COL.COLO4_16588 Corchorus olitorius HOM05D001486 ORTHO05D004921 7.8e-47 191.0 185 57.3
CAN.G601.2 Capsicum annuum HOM05D001486 ORTHO05D004921 1.3e-46 190.3 188 59.0
Migut.E00481 Erythranthe guttata HOM05D001486 ORTHO05D004921 1.7e-46 189.9 189 56.1
Nn4g24372 Nelumbo nucifera HOM05D001486 ORTHO05D004921 2.3e-46 189.5 185 57.8
Cc04_g10510 Coffea canephora HOM05D001486 ORTHO05D004921 3.0e-46 189.1 184 58.7
Potri.008G134800 Populus trichocarpa HOM05D001486 ORTHO05D004921 3.0e-46 189.1 185 56.8
TWI74G0959 Tripterygium wilfordii HOM05D001486 ORTHO05D004921 3.9e-46 188.7 193 57.5
CANSAT01G0610 Cannabis sativa HOM05D001486 ORTHO05D004921 5.1e-46 188.3 193 56.5
Sopen07g004030 Solanum pennellii HOM05D001486 ORTHO05D004921 5.1e-46 188.3 188 58.5
CAN.G149.16 Capsicum annuum HOM05D001486 ORTHO05D004921 6.6e-46 188.0 188 58.5
Cpa.g.sc2.194 Carica papaya HOM05D001486 ORTHO05D004921 6.6e-46 188.0 189 56.1
ECA233G0786 Erigeron canadensis HOM05D001486 ORTHO05D004921 1.9e-45 186.4 189 54.0
Solyc07g008160.3 Solanum lycopersicum HOM05D001486 ORTHO05D004921 1.9e-45 186.4 188 58.0
Gohir.D02G139700 Gossypium hirsutum HOM05D001486 ORTHO05D004921 5.6e-45 184.9 183 56.8
Gorai.005G157100 Gossypium raimondii HOM05D001486 ORTHO05D004921 1.2e-44 183.7 183 56.3
Gohir.A03G115400 Gossypium hirsutum HOM05D001486 ORTHO05D004921 1.6e-44 183.3 185 55.7
Oeu064208.1 Olea europaea HOM05D001486 ORTHO05D004921 2.1e-44 183.0 189 52.9
SalBow2G2685 Salvia bowleyana HOM05D001486 ORTHO05D004921 2.8e-44 182.6 189 54.0
HanXRQChr08g0212501 Helianthus annuus HOM05D001486 ORTHO05D004921 6.2e-44 181.4 189 52.9
FvH4_4g33560 Fragaria vesca HOM05D001486 ORTHO05D004921 8.1e-44 181.0 190 55.3
FAN12G0503 Fragaria x ananassa HOM05D001486 ORTHO05D004921 8.1e-44 181.0 190 55.3
FAN22G2372 Fragaria x ananassa HOM05D001486 ORTHO05D004921 8.1e-44 181.0 190 55.3
MD16G1018800 Malus domestica HOM05D001486 ORTHO05D004921 1.1e-43 180.6 188 56.4
Sc11g0004180 Simmondsia chinensis HOM05D001486 ORTHO05D004921 1.1e-43 180.6 185 55.1
Eucgr.G02106 Eucalyptus grandis HOM05D001486 ORTHO05D004921 1.4e-43 180.3 189 55.0
Lsat_1_v5_gn_8_46521 Lactuca sativa HOM05D001486 ORTHO05D004921 1.4e-43 180.3 189 51.9
Duzib268G0355 Durio zibethinus HOM05D001486 ORTHO05D004921 1.8e-43 179.9 189 54.5
PGR142G2431 Punica granatum HOM05D001486 ORTHO05D004921 1.8e-43 179.9 189 55.0
PSO782G0822 Papaver somniferum HOM05D001486 ORTHO05D004921 3.1e-43 179.1 189 54.0
arahy.Tifrunner.gnm1.ann1.WZE3XK Arachis hypogaea HOM05D001486 ORTHO05D004921 4.0e-43 178.7 185 55.7
arahy.Tifrunner.gnm1.ann1.FK3VI9 Arachis hypogaea HOM05D001486 ORTHO05D004921 5.2e-43 178.3 185 55.1
FAN17G1739 Fragaria x ananassa HOM05D001486 ORTHO05D004921 5.2e-43 178.3 190 54.7
SGA_v2.0_scaffold23G10214 Striga asiatica HOM05D001486 ORTHO05D004921 6.9e-43 177.9 189 52.4
RcHm_v2.0_Chr4g0443061 Rosa chinensis HOM05D001486 ORTHO05D004921 1.2e-42 177.2 190 54.7
PSO063G3102 Papaver somniferum HOM05D001486 ORTHO05D004921 2.0e-42 176.4 189 53.4
FAN07G1595 Fragaria x ananassa HOM05D001486 ORTHO05D004921 4.4e-42 175.3 190 54.2
ATR0753G157 Amborella trichopoda HOM05D001486 ORTHO05D004921 5.8e-42 174.9 183 52.5
Sed0010499 Sechium edule HOM05D001486 ORTHO05D004921 7.6e-42 174.5 183 51.4
ClCG07G005610 Citrullus lanatus HOM05D001486 ORTHO05D004921 9.9e-42 174.1 183 51.9
Duzib251G0538 Durio zibethinus HOM05D001486 ORTHO05D004921 1.3e-41 173.7 189 53.4
Glyma.08G045900 Glycine max HOM05D001486 ORTHO05D004921 1.7e-41 173.3 187 55.1
Glyma.05G238800 Glycine max HOM05D001486 ORTHO05D004921 4.9e-41 171.8 183 54.6
Lalb_Chr09g0330891 Lupinus albus HOM05D001486 ORTHO05D004921 6.4e-41 171.4 185 52.4
Hund13366 Selenicereus undatus HOM05D001486 ORTHO05D004921 6.4e-41 171.4 189 50.8
Psat7g007960 Pisum sativum HOM05D001486 ORTHO05D004921 1.4e-40 170.2 182 53.3
MELO3C026441.2 Cucumis melo HOM05D001486 ORTHO05D004921 2.4e-40 169.5 183 50.3
VMungo0251G0466 Vigna mungo HOM05D001486 ORTHO05D004921 3.2e-40 169.1 190 54.7
DCAR_007329 Daucus carota HOM05D001486 ORTHO05D004921 5.4e-40 168.3 172 54.7
CsaV3_5G015740 Cucumis sativus L. HOM05D001486 ORTHO05D004921 9.3e-40 167.5 183 49.7
Ca_17277_v3 Cicer arietinum L. HOM05D001486 ORTHO05D004921 1.2e-39 167.2 183 54.1
EL10Ac3g06288 Beta vulgaris HOM05D001486 ORTHO05D004921 2.7e-39 166.0 190 51.1
Ah.13g072990 Amaranthus hybridus HOM05D001486 ORTHO05D004921 3.5e-39 165.6 189 51.9
Aqoxy3G03310 Aquilegia oxysepala HOM05D001486 ORTHO05D004921 3.5e-39 165.6 189 52.4
AL1G26870 Arabidopsis lyrata HOM05D001486 ORTHO05D004921 6.0e-39 164.9 185 51.9
Lj4g0010019 Lotus japonicus HOM05D001486 ORTHO05D004921 6.0e-39 164.9 182 53.3
Phvul.002G321200 Phaseolus vulgaris HOM05D001486 ORTHO05D004921 6.0e-39 164.9 190 53.2
Medtr8g105290 Medicago truncatula HOM05D001486 ORTHO05D004921 7.8e-39 164.5 182 51.6
AT1G14850 Arabidopsis thaliana HOM05D001486 ORTHO05D004921 1.3e-38 163.7 185 51.4
AUR62030013 Chenopodium quinoa HOM05D001486 ORTHO05D004921 1.7e-38 163.3 190 51.1
AUR62002589 Chenopodium quinoa HOM05D001486 ORTHO05D004921 2.3e-38 162.9 190 50.5
TPR.G19252 Trifolium pratense HOM05D001486 ORTHO05D004921 2.3e-38 162.9 182 51.6
vmacro04889 Vaccinium macrocarpon HOM05D001486 ORTHO05D004921 3.0e-38 162.5 88 88.6
Carub.0001s1464 Capsella rubella HOM05D001486 ORTHO05D004921 5.1e-38 161.8 182 50.5
Thhalv10006562m.g Eutrema salsugineum HOM05D001486 ORTHO05D004921 8.7e-38 161.0 183 51.4
Aqoxy7G03241 Aquilegia oxysepala HOM05D001486 ORTHO05D004921 1.1e-37 160.6 189 51.9
Sp1g13290 Schrenkiella parvula HOM05D001486 ORTHO05D004921 1.1e-37 160.6 183 49.7
HPP92_002282 Vanilla planifolia HOM05D001486 ORTHO05D004921 1.1e-37 160.6 185 49.7
BcaC05g25406 Brassica carinata HOM05D001486 ORTHO05D004921 1.5e-37 160.2 189 50.8
A06p10890 Brassica napus HOM05D001486 ORTHO05D004921 1.5e-37 160.2 190 49.5
C05p12830 Brassica napus HOM05D001486 ORTHO05D004921 1.5e-37 160.2 189 50.8
C08p45360 Brassica napus HOM05D001486 ORTHO05D004921 1.5e-37 160.2 190 50.0
BolC5t30028H Brassica oleracea HOM05D001486 ORTHO05D004921 1.5e-37 160.2 189 50.8
BraA06t24267Z Brassica rapa HOM05D001486 ORTHO05D004921 1.5e-37 160.2 190 49.5
CARHR015390 Cardamine hirsuta HOM05D001486 ORTHO05D004921 1.5e-37 160.2 183 50.3
unitig_27.g25159 Utricularia gibba HOM05D001486 ORTHO05D004921 1.9e-37 159.8 194 49.5
A09p61750 Brassica napus HOM05D001486 ORTHO05D004921 2.5e-37 159.5 183 50.8
SEGI_06977 Sequoiadendron giganteum HOM05D001486 ORTHO05D004921 4.3e-37 158.7 188 45.7
BcaB02g06554 Brassica carinata HOM05D001486 ORTHO05D004921 5.6e-37 158.3 189 50.3
BcaB08g34420 Brassica carinata HOM05D001486 ORTHO05D004921 1.3e-36 157.1 184 50.5
BcaC07g41534 Brassica carinata HOM05D001486 ORTHO05D004921 2.1e-36 156.4 184 50.5
BolC8t52091H Brassica oleracea HOM05D001486 ORTHO05D004921 2.1e-36 156.4 184 50.5
Aa31LG1G260 Aethionema arabicum HOM05D001486 ORTHO05D004921 2.8e-36 156.0 180 49.4
BraA09t41545Z Brassica rapa HOM05D001486 ORTHO05D004921 2.8e-36 156.0 183 49.7
THA.LOC104823681 Tarenaya hassleriana HOM05D001486 ORTHO05D004921 3.6e-36 155.6 172 51.2
Lalb_Chr05g0222211 Lupinus albus HOM05D001486 ORTHO05D004921 8.1e-36 154.5 190 48.4
TAR629G0795 Trochodendron aralioides HOM05D001486 ORTHO05D004921 8.1e-36 154.5 185 53.0
HanXRQChr12g0363231 Helianthus annuus HOM05D001486 ORTHO05D004921 1.8e-35 153.3 172 51.7
Os06g0305200 Oryza sativa ssp. japonica HOM05D001486 ORTHO05D004921 4.0e-35 152.1 185 49.7
Lj1g0014898 Lotus japonicus HOM05D001486 ORTHO05D004921 1.2e-34 150.6 175 50.3
Zm00001eb009110 Zea mays HOM05D001486 ORTHO05D004921 1.2e-34 150.6 183 48.6
AL1G32080 Arabidopsis lyrata HOM05D001486 ORTHO05D004921 3.4e-34 149.1 190 46.3
Zm00001eb255180 Zea mays HOM05D001486 ORTHO05D004921 5.8e-34 148.3 183 48.1
CDE06G1153 Ceratophyllum demersum HOM05D001486 ORTHO05D004921 1.6e-31 140.2 176 47.2
Pp3c8_3720 Physcomitrium patens HOM05D001486 ORTHO05D004921 8.7e-30 134.4 193 40.4
vmacro09906 Vaccinium macrocarpon HOM05D001486 ORTHO05D004921 2.0e-26 123.2 67 89.6
Mapoly0035s0137 Marchantia polymorpha HOM05D001486 ORTHO05D004921 3.4e-26 122.5 189 37.0
Peaxi162Scf01391g00116 Petunia axillaris HOM05D001486 ORTHO05D004921 4.3e-21 105.5 88 62.5
Rhsim12G0118300 Rhododendron simsii HOM05D001486 ORTHO05D004921 4.6e-15 85.5 47 87.2
CDE07G1854 Ceratophyllum demersum HOM05D001486 ORTHO05D004921 3.3e-13 79.3 45 77.8
RcHm_v2.0_Chr2g0167021 Rosa chinensis HOM05D001486 ORTHO05D004921 3.7e-12 75.9 86 47.7
Haze_10881 Corylus avellana HOM05D001486 ORTHO05D004921 2.2e-09 66.6 111 41.4
Nitab4.5_0004576g0040 Nicotiana tabacum HOM05D001486 ORTHO05D004921 2.1e-07 60.1 115 40.9
Nitab4.5_0010421g0010 Nicotiana tabacum HOM05D001486 ORTHO05D004921 7.9e-07 58.2 115 40.9
Zm00001eb201400 Zea mays HOM05D001486 ORTHO05D004921 1.0e-06 57.8 45 64.4
Peaxi162Scf00376g00816 Petunia axillaris HOM05D001486 ORTHO05D004921 5.1e-06 55.5 115 39.1


User provided reference genes

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