Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0011460 Camellia sinensis var. sinensis HOM05D006029 ORTHO05D007439 2.9e-53 211.5 95 100.0
vmacro12594 Vaccinium macrocarpon HOM05D006029 ORTHO05D007439 5.7e-49 197.2 95 91.6
Rhsim01G0175700 Rhododendron simsii HOM05D006029 ORTHO05D007439 1.5e-46 189.1 95 88.4
GSVIVG01027190001 Vitis vinifera HOM05D006029 ORTHO05D007439 2.2e-45 185.3 95 85.3
TAR374G1259 Trochodendron aralioides HOM05D006029 ORTHO05D007439 8.2e-40 166.8 95 75.8
Eucgr.E03439 Eucalyptus grandis HOM05D006029 ORTHO05D007439 3.1e-39 164.9 94 72.3
Eucgr.E03441 Eucalyptus grandis HOM05D006029 ORTHO05D007439 3.1e-39 164.9 94 72.3
Eucgr.E03442 Eucalyptus grandis HOM05D006029 ORTHO05D007439 3.1e-39 164.9 94 72.3
Eucgr.L01751 Eucalyptus grandis HOM05D006029 ORTHO05D007439 3.1e-39 164.9 94 72.3
Hma1.2p1_1482F.1_g286210 Hydrangea macrophylla HOM05D006029 ORTHO05D007439 1.5e-38 162.5 95 75.8
PGR102G2016 Punica granatum HOM05D006029 ORTHO05D007439 2.0e-38 162.2 94 72.3
TWI36G0126 Tripterygium wilfordii HOM05D006029 ORTHO05D007439 2.0e-38 162.2 95 72.6
Sed0019070 Sechium edule HOM05D006029 ORTHO05D007439 1.0e-37 159.8 95 70.5
ClCG10G013250 Citrullus lanatus HOM05D006029 ORTHO05D007439 1.3e-37 159.5 95 73.7
DCAR_006981 Daucus carota HOM05D006425 ORTHO05D007312 1.1e-36 156.4 95 68.4
Rhsim07G0002100 Rhododendron simsii HOM05D006029 ORTHO05D007439 1.4e-36 156.0 89 80.9
Duzib138G0795 Durio zibethinus HOM05D006029 ORTHO05D007439 2.5e-36 155.2 96 75.0
MELO3C026899.2 Cucumis melo HOM05D006029 ORTHO05D007439 5.5e-36 154.1 95 71.6
CsaV3_3G043380 Cucumis sativus L. HOM05D006029 ORTHO05D007439 5.5e-36 154.1 95 71.6
Manes.01G243500 Manihot esculenta HOM05D006029 ORTHO05D007439 7.2e-36 153.7 96 68.8
CiPaw.02G042300 Carya illinoinensis HOM05D006029 ORTHO05D007439 2.1e-35 152.1 95 66.3
Lj1g0014790 Lotus japonicus HOM05D006029 ORTHO05D007439 2.7e-35 151.8 95 68.4
Lj1g0022243 Lotus japonicus HOM05D006029 ORTHO05D007439 2.7e-35 151.8 95 68.4
COL.COLO4_06245 Corchorus olitorius HOM05D006029 ORTHO05D007439 3.6e-35 151.4 96 71.9
Gohir.D08G145300 Gossypium hirsutum HOM05D006029 ORTHO05D007439 3.6e-35 151.4 96 72.9
Phvul.008G101000 Phaseolus vulgaris HOM05D006029 ORTHO05D007439 3.6e-35 151.4 95 70.5
Gohir.D12G270400 Gossypium hirsutum HOM05D006029 ORTHO05D007439 7.9e-35 150.2 96 71.9
Gorai.004G150300 Gossypium raimondii HOM05D006029 ORTHO05D007439 7.9e-35 150.2 96 71.9
Gorai.008G290700 Gossypium raimondii HOM05D006029 ORTHO05D007439 7.9e-35 150.2 96 71.9
arahy.Tifrunner.gnm1.ann1.A8XVJK Arachis hypogaea HOM05D006029 ORTHO05D007439 3.0e-34 148.3 95 65.3
arahy.Tifrunner.gnm1.ann1.ZU3BRN Arachis hypogaea HOM05D006029 ORTHO05D007439 3.0e-34 148.3 95 65.3
Gohir.A08G124200 Gossypium hirsutum HOM05D006029 ORTHO05D007439 3.9e-34 147.9 96 70.8
Thecc.01G338500 Theobroma cacao HOM05D006029 ORTHO05D007439 6.7e-34 147.1 98 71.4
Glyma.18G179600 Glycine max HOM05D006029 ORTHO05D007439 1.5e-33 146.0 93 66.7
Cfa010653 Carpinus fangiana HOM05D006029 ORTHO05D007439 2.0e-33 145.6 95 64.2
Gohir.A12G269900 Gossypium hirsutum HOM05D006029 ORTHO05D007439 3.3e-33 144.8 96 69.8
Potri.012G015900 Populus trichocarpa HOM05D006029 ORTHO05D007439 3.3e-33 144.8 96 66.7
Sed0007850 Sechium edule HOM05D006029 ORTHO05D007439 3.3e-33 144.8 95 68.4
Cc00_g02440 Coffea canephora HOM05D006029 ORTHO05D007439 5.7e-33 144.1 96 67.7
Lalb_Chr04g0261421 Lupinus albus HOM05D006029 ORTHO05D007439 2.2e-32 142.1 95 62.1
Cc06_g21100 Coffea canephora HOM05D006029 ORTHO05D007439 3.7e-32 141.4 96 66.7
Glyma.07G131200 Glycine max HOM05D006029 ORTHO05D007439 3.7e-32 141.4 93 65.6
CANSAT56G3403 Cannabis sativa HOM05D006029 ORTHO05D007439 4.8e-32 141.0 93 64.5
Ciclev10022957m.g Citrus clementina HOM05D006029 ORTHO05D007439 4.8e-32 141.0 93 62.4
Sabra12G0016400 Salix brachista HOM05D006029 ORTHO05D007439 4.8e-32 141.0 96 64.6
Peaxi162Scf00156g00617 Petunia axillaris HOM05D006029 ORTHO05D007439 6.3e-32 140.6 95 60.0
Nn1g00349 Nelumbo nucifera HOM05D006029 ORTHO05D007439 8.2e-32 140.2 94 66.0
Oeu043218.1 Olea europaea HOM05D006029 ORTHO05D007439 1.1e-31 139.8 91 65.9
Solyc05g055890.3 Solanum lycopersicum HOM05D006029 ORTHO05D007439 1.1e-31 139.8 95 62.1
Sopen05g034290 Solanum pennellii HOM05D006029 ORTHO05D007439 1.1e-31 139.8 95 62.1
vmacro23448 Vaccinium macrocarpon HOM05D006029 ORTHO05D007439 3.1e-31 138.3 65 96.9
PGSC0003DMG402023468 Solanum tuberosum HOM05D006029 ORTHO05D007439 9.1e-31 136.7 95 60.0
HanXRQChr05g0130881 Helianthus annuus HOM05D006029 ORTHO05D007439 7.7e-30 133.7 96 65.6
HanXRQChr17g0563271 Helianthus annuus HOM05D006029 ORTHO05D007439 7.7e-30 133.7 96 65.6
CAN.G694.9 Capsicum annuum HOM05D006029 ORTHO05D007439 1.3e-29 132.9 95 57.9
MSTRG.17362 Avicennia marina HOM05D006029 ORTHO05D007439 1.7e-29 132.5 96 63.5
MD01G1085300 Malus domestica HOM05D006029 ORTHO05D007439 5.0e-29 131.0 87 64.4
TPR.G4810 Trifolium pratense HOM05D006029 ORTHO05D007439 5.0e-29 131.0 93 58.1
HPP92_017871 Vanilla planifolia HOM05D006029 ORTHO05D007439 8.5e-29 130.2 93 61.3
unitig_60.g25801 Utricularia gibba HOM05D006029 ORTHO05D007439 4.2e-28 127.9 95 58.9
Peaxi162Scf00740g00556 Petunia axillaris HOM05D006029 ORTHO05D007439 5.5e-28 127.5 85 60.0
Psat3g005240 Pisum sativum HOM05D006029 ORTHO05D007439 5.5e-28 127.5 93 58.1
Dinv34229 Davidia involucrata HOM05D006425 ORTHO05D007312 3.6e-27 124.8 70 77.1
Lsat_1_v5_gn_4_30800 Lactuca sativa HOM05D006029 ORTHO05D007439 4.7e-27 124.4 93 64.5
Prupe.2G192900 Prunus persica HOM05D006029 ORTHO05D007439 6.1e-27 124.0 87 60.9
Os02g0672700 Oryza sativa ssp. japonica HOM05D006029 ORTHO05D007439 1.0e-26 123.2 91 63.7
Hund17067 Selenicereus undatus HOM05D006029 ORTHO05D007439 1.8e-26 122.5 95 61.1
Haze_03591 Corylus avellana HOM05D004263 ORTHO05D004931 3.0e-26 121.7 80 63.8
Lj3g0023283 Lotus japonicus HOM05D006029 ORTHO05D007439 8.8e-26 120.2 93 53.8
AT4G07950 Arabidopsis thaliana HOM05D006029 ORTHO05D007439 2.0e-25 119.0 91 60.4
Sc02g0002910 Simmondsia chinensis HOM05D006029 ORTHO05D007439 2.6e-25 118.6 94 56.4
Thhalv10009170m.g Eutrema salsugineum HOM05D006029 ORTHO05D007439 4.4e-25 117.9 91 59.3
RcHm_v2.0_Chr1g0360471 Rosa chinensis HOM05D006029 ORTHO05D007439 4.4e-25 117.9 87 58.6
BcaC07g42429 Brassica carinata HOM05D006029 ORTHO05D007439 7.5e-25 117.1 91 57.1
A03p11160 Brassica napus HOM05D000069 ORTHO05D021930 7.5e-25 117.1 91 57.1
A09p39050 Brassica napus HOM05D006029 ORTHO05D007439 7.5e-25 117.1 91 57.1
A09p68990 Brassica napus HOM05D006029 ORTHO05D007439 7.5e-25 117.1 91 57.1
BolC3t13750H Brassica oleracea HOM05D006029 ORTHO05D007439 7.5e-25 117.1 91 57.1
BolC8t52870H Brassica oleracea HOM05D006029 ORTHO05D007439 7.5e-25 117.1 91 57.1
BraA03t10431Z Brassica rapa HOM05D006029 ORTHO05D007439 7.5e-25 117.1 91 57.1
BraA09t42236Z Brassica rapa HOM05D006029 ORTHO05D007439 7.5e-25 117.1 91 57.1
Migut.B01899 Erythranthe guttata HOM05D006029 ORTHO05D007439 7.5e-25 117.1 97 56.7
EL10Ac5g10924 Beta vulgaris HOM05D006029 ORTHO05D007439 9.7e-25 116.7 95 57.9
BraA09t39405Z Brassica rapa HOM05D006029 ORTHO05D007439 9.7e-25 116.7 91 57.1
Medtr7g116750 Medicago truncatula HOM05D006029 ORTHO05D007439 1.3e-24 116.3 93 53.8
Zm00001eb187060 Zea mays HOM05D006029 ORTHO05D007439 2.2e-24 115.5 95 57.9
FvH4_7g17060 Fragaria vesca HOM05D006029 ORTHO05D007439 2.8e-24 115.2 87 56.3
FAN01G1288 Fragaria x ananassa HOM05D006029 ORTHO05D007439 2.8e-24 115.2 87 56.3
FAN03G2913 Fragaria x ananassa HOM05D006029 ORTHO05D007439 2.8e-24 115.2 87 56.3
FAN06G2526 Fragaria x ananassa HOM05D006029 ORTHO05D007439 2.8e-24 115.2 87 56.3
FAN06G3186 Fragaria x ananassa HOM05D006029 ORTHO05D007439 2.8e-24 115.2 87 56.3
FAN10G2808 Fragaria x ananassa HOM05D006029 ORTHO05D007439 2.8e-24 115.2 87 56.3
FAN10G3748 Fragaria x ananassa HOM05D006029 ORTHO05D007439 2.8e-24 115.2 87 56.3
AL1G11270 Arabidopsis lyrata HOM05D006029 ORTHO05D007439 4.8e-24 114.4 91 59.3
C03p12870 Brassica napus HOM05D006029 ORTHO05D007439 6.3e-24 114.0 91 56.0
Medtr5g030180 Medicago truncatula HOM05D006029 ORTHO05D007439 6.3e-24 114.0 91 54.9
Sp1g01080 Schrenkiella parvula HOM05D006029 ORTHO05D007439 8.2e-24 113.6 91 57.1
ATR0751G147 Amborella trichopoda HOM05D006029 ORTHO05D007439 1.1e-23 113.2 88 60.2
Carub.0003s3000 Capsella rubella HOM05D006029 ORTHO05D007439 1.8e-23 112.5 91 58.2
AT1G01210 Arabidopsis thaliana HOM05D006029 ORTHO05D007439 4.1e-23 111.3 91 57.1
CARHR001260 Cardamine hirsuta HOM05D006029 ORTHO05D007439 5.3e-23 110.9 91 57.1
Pp3c15_5550 Physcomitrium patens HOM05D006029 ORTHO05D007439 7.0e-23 110.5 96 52.1
Atru.chr5.715 Acer truncatum HOM05D006029 ORTHO05D007439 9.1e-23 110.2 79 59.5
THA.LOC104815886 Tarenaya hassleriana HOM05D006029 ORTHO05D007439 2.7e-22 108.6 91 53.8
Cpa.g.sc96.66 Carica papaya HOM05D006029 ORTHO05D007439 7.7e-22 107.1 94 53.2
PSO170G0977 Papaver somniferum HOM05D006029 ORTHO05D007439 1.0e-21 106.7 88 59.1
PSO782G1905 Papaver somniferum HOM05D006029 ORTHO05D007439 2.2e-21 105.5 88 58.0
PSO782G2649 Papaver somniferum HOM05D006029 ORTHO05D007439 2.2e-21 105.5 88 58.0
PSO782G4464 Papaver somniferum HOM05D006029 ORTHO05D007439 2.2e-21 105.5 88 58.0
SGA_v2.0_scaffold22G09953 Striga asiatica HOM05D006029 ORTHO05D007439 1.1e-20 103.2 96 52.1
AagrBONN_evm.TU.Sc2ySwM_117.3630 Anthoceros agrestis HOM05D006029 ORTHO05D007439 1.5e-20 102.8 89 51.7
Lsat_1_v5_gn_7_7741 Lactuca sativa HOM05D006029 ORTHO05D007439 2.5e-20 102.1 92 58.7
CBR_g49523 Chara braunii HOM05D006029 ORTHO05D007439 5.5e-20 100.9 89 50.6
Haze_15690 Corylus avellana HOM05D006029 ORTHO05D007439 7.2e-20 100.5 78 53.8
Nitab4.5_0000476g0280 Nicotiana tabacum HOM05D006029 ORTHO05D007439 2.1e-19 99.0 69 55.1
Aa31LG1G10580 Aethionema arabicum HOM05D006029 ORTHO05D007439 1.2e-17 93.2 91 45.1
Aqoxy4G03109 Aquilegia oxysepala HOM05D006029 ORTHO05D007439 1.2e-17 93.2 92 52.2
Lsat_1_v5_gn_6_63820 Lactuca sativa HOM05D006029 ORTHO05D007439 4.4e-17 91.3 119 43.7
Mapoly0101s0063 Marchantia polymorpha HOM05D006029 ORTHO05D007439 4.4e-17 91.3 92 47.8
Cre02.g102400 Chlamydomonas reinhardtii HOM05D006029 ORTHO05D007439 4.1e-15 84.7 93 40.9
SMO159G0009 Selaginella moellendorffii HOM05D006029 ORTHO05D007439 7.0e-15 84.0 91 44.0
MCO11G240 Micromonas commoda HOM05D006029 ORTHO05D007439 2.0e-14 82.4 89 44.9
Carub.0003s3001 Capsella rubella HOM05D003869 ORTHO05D004718 5.9e-14 80.9 71 54.9
Nitab4.5_0009816g0020 Nicotiana tabacum HOM05D006029 ORTHO05D007439 1.0e-13 80.1 59 52.5
CBR_g31408 Chara braunii HOM05D006029 ORTHO05D007439 1.3e-13 79.7 71 47.9
QL08p046069 Quercus lobata HOM05D006029 ORTHO05D007439 2.3e-13 79.0 51 62.7
Lsat_1_v5_gn_6_81300 Lactuca sativa HOM05D006029 ORTHO05D007439 4.7e-11 71.2 48 66.7
SMO347G0197 Selaginella moellendorffii HOM05D006029 ORTHO05D007439 2.3e-10 68.9 106 36.8
Cc08_g08090 Coffea canephora HOM05D006029 ORTHO05D007439 6.8e-10 67.4 38 71.1
PRCOL_00000799 Prasinoderma coloniale HOM05D006029 ORTHO05D007439 2.0e-09 65.9 91 40.7
Ca_09543_v3 Cicer arietinum L. HOM05D006029 ORTHO05D007439 1.3e-08 63.2 48 62.5
EL10Ac3g06123 Beta vulgaris HOM05D002276 ORTHO05D002381 4.9e-08 61.2 82 37.8
AUR62002430 Chenopodium quinoa HOM05D002276 ORTHO05D002381 9.2e-07 57.0 82 36.6
AUR62023758 Chenopodium quinoa HOM05D002276 ORTHO05D002381 9.2e-07 57.0 82 36.6
Ah.05g171950 Amaranthus hybridus HOM05D002276 ORTHO05D002381 1.2e-06 56.6 82 36.6
Hund22971 Selenicereus undatus HOM05D002276 ORTHO05D002381 1.2e-06 56.6 82 36.6


User provided reference genes

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