Paralogs (intra-species colinear regions)
No paralogous anchorpoints available
Orthologs (inter-species colinear regions)
Organism | Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|---|
Aethionema arabicum | Aa31LG1G10580 | LG-1 | + | View | |
Acer truncatum | Atru.chr5.715 | chr5 | - | View | |
Arabidopsis lyrata | AL1G11270 | scaffold_1 | - | View | |
Avicennia marina | MSTRG.17362 | ScioBoG_19743_HRSCAF_19834 | - | View | |
Arachis hypogaea | arahy.Tifrunner.gnm1.ann1.A8XVJK | K03019 - DNA-directed RNA polymerase III subunit RPC11 (RPC11, POLR3K) | arahy.Tifrunner.gnm1.Arahy.06 | + | View |
Arachis hypogaea | arahy.Tifrunner.gnm1.ann1.ZU3BRN | K03019 - DNA-directed RNA polymerase III subunit RPC11 (RPC11, POLR3K) | arahy.Tifrunner.gnm1.Arahy.16 | - | View |
Arabidopsis thaliana | AT1G01210 | DNA-directed RNA polymerase, subunit M, archaeal DNA-directed RNA polymerase%2C subunit M%2C archaeal%3B FUNCTIONS IN: in 6 functions%3B INVOLVED IN: RNA elongation%2C regulation of transcription%2C DNA-dependent%2C transcription%2C regulation of transcription%3B LOCATED IN: nucleus%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C TFIIS-type (InterPro:IPR001222)%2C DNA-directed RNA polymerase%2C M/15kDa subunit (InterPro:IPR001529)%2C DNA-directed RNA polymerase%2C subunit M%2C archaeal (InterPro:IPR006288)%2C DNA-directed RNA polymerase M%2C 15kDa subunit%2C conserved site (InterPro:IPR019761)%3B BEST Arabidopsis thaliana protein match is: DNA-directed RNA polymerase%2C subunit M%2C archaeal (TAIR:AT4G07950.1)%3B Has 1129 Blast hits to 1129 proteins in 326 species: Archae - 242%3B Bacteria - 0%3B Metazoa - 276%3B Fungi - 294%3B Plants - 112%3B Viruses - 0%3B Other Eukaryotes - 205 (source: NCBI BLink). | Chr1 | + | View |
Brassica napus | A09p68990 | A09 | + | View | |
Brassica oleracea | BolC8t52870H | C8 | + | View | |
Brassica rapa | BraA09t42236Z | A09 | + | View | |
Cannabis sativa | CANSAT56G3403 | NC_044371.1 | + | View | |
Corylus avellana | Haze_15690 | Protein of unknown function | 11 | - | View |
Citrus clementina | Ciclev10022957m.g | scaffold_3 | + | View | |
Cardamine hirsuta | CARHR001260 | DNA-directed RNA polymerase subunit | Chr1 | - | View |
Carya illinoinensis | CiPaw.02G042300 | K03019 - DNA-directed RNA polymerase III subunit RPC11 (RPC11, POLR3K) | Chr02 | - | View |
Carica papaya | Cpa.g.sc96.66 | supercontig_96 | - | View | |
Durio zibethinus | Duzib138G0795 | NW_019167893.1 | - | View | |
Erythranthe guttata | Migut.B01899 | scaffold_2 | - | View | |
Eutrema salsugineum | Thhalv10009170m.g | K03019 - DNA-directed RNA polymerase III subunit RPC11 (RPC11, POLR3K) | scaffold_5 | + | View |
Fragaria x ananassa | FAN01G1288 | K03019 - DNA-directed RNA polymerase III subunit RPC11 (RPC11, POLR3K) | Fvb7-4 | + | View |
Fragaria x ananassa | FAN10G3748 | K03019 - DNA-directed RNA polymerase III subunit RPC11 (RPC11, POLR3K) | Fvb7-1 | - | View |
Fragaria x ananassa | FAN10G2808 | K03019 - DNA-directed RNA polymerase III subunit RPC11 (RPC11, POLR3K) | Fvb7-1 | - | View |
Fragaria x ananassa | FAN06G2526 | K03019 - DNA-directed RNA polymerase III subunit RPC11 (RPC11, POLR3K) | Fvb7-2 | - | View |
Fragaria x ananassa | FAN06G3186 | K03019 - DNA-directed RNA polymerase III subunit RPC11 (RPC11, POLR3K) | Fvb7-2 | - | View |
Fragaria x ananassa | FAN03G2913 | K03019 - DNA-directed RNA polymerase III subunit RPC11 (RPC11, POLR3K) | Fvb7-3 | + | View |
Fragaria vesca | FvH4_7g17060 | K03019 - DNA-directed RNA polymerase III subunit RPC11 (RPC11, POLR3K) | Fvb7 | - | View |
Gossypium hirsutum | Gohir.D08G145300 | K03019 - DNA-directed RNA polymerase III subunit RPC11 (RPC11, POLR3K) | D08 | + | View |
Gossypium hirsutum | Gohir.A08G124200 | K03019 - DNA-directed RNA polymerase III subunit RPC11 (RPC11, POLR3K) | A08 | + | View |
Gossypium raimondii | Gorai.004G150300 | Chr04 | + | View | |
Helianthus annuus | HanXRQChr17g0563271 | Probable DNA-directed RNA polymerase III subunit RPC10 | HanXRQChr17 | + | View |
Lupinus albus | Lalb_Chr04g0261421 | K03019 - DNA-directed RNA polymerase III subunit RPC11 (RPC11, POLR3K) | Lalb_Chr04 | + | View |
Lotus japonicus | Lj1g0014790 | K03019 - DNA-directed RNA polymerase III subunit RPC11 (RPC11, POLR3K) | chr1 | + | View |
Lactuca sativa | Lsat_1_v5_gn_4_30800 | K03019 - DNA-directed RNA polymerase III subunit RPC11 (RPC11, POLR3K) | Lsat_1_v8_lg_4 | + | View |
Malus domestica | MD01G1085300 | DNA-directed RNA polymerase | Chr01 | - | View |
Manihot esculenta | Manes.01G243500 | Chromosome01 | + | View | |
Nelumbo nucifera | Nn1g00349 | chr1 | - | View | |
Prunus persica | Prupe.2G192900 | Pp02 | - | View | |
Quercus lobata | QL08p046069 | 8 | - | View | |
Rosa chinensis | RcHm_v2.0_Chr1g0360471 | RcHm_v2.0_Chr1 | - | View | |
Rhododendron simsii | Rhsim01G0175700 | chr01 | - | View | |
Rhododendron simsii | Rhsim07G0002100 | chr07 | + | View | |
Schrenkiella parvula | Sp1g01080 | K03019 - DNA-directed RNA polymerase III subunit RPC11 (RPC11, POLR3K) | ch1-1 | - | View |
Trochodendron aralioides | TAR374G1259 | group12 | - | View | |
Theobroma cacao | Thecc.01G338500 | DNA-directed RNA polymerase subunit | Chromosome_1 | + | View |
Vaccinium macrocarpon | vmacro12594 | Similar to POLR3K: DNA-directed RNA polymerase III subunit RPC10 (Homo sapiens OX%3D9606) | chr11_Vaccinium_macrocarpon_Stevens_v1 | + | View |
Vitis vinifera | GSVIVG01027190001 | chr15 | + | View |