Gene: COL.COLO4_06245

General Information

Structural Information

  • Species Corchorus olitorius
  • Gene Identifier COL.COLO4_06245
  • Transcript Identifier COL.rna5064
  • Gene Type Coding gene
  • Location AWUE01012656.1 : 10903-12109 : negative

Gene Family Information

  • ID HOM05D006029
  • #Genes/#Species 131/87
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna5064
  • GenBank OMP08656.1
  • id gene6217
  • gene_name COLO4_06245
  • uniprot A0A1R3KNJ8

Descriptions

  • Description Zinc finger, TFIIS-type
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0042779
IEA
GOA DatabasetRNA 3'-trailer cleavage
GO:0042779
IEA
InterProtRNA 3'-trailer cleavage
GO:0006351
IEA
GOA Databasetranscription, DNA-templated
GO:0006351
IEA
InterProtranscription, DNA-templated

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0003899
IEA
GOA DatabaseDNA-directed 5'-3' RNA polymerase activity
GO:0003676
IEA
GOA Databasenucleic acid binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0008270
IEA
GOA Databasezinc ion binding
GO:0008270
IEA
InterProzinc ion binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005730
IEA
GOA Databasenucleolus
GO:0005634
IEA
GOA Databasenucleus
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT4G07950

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR034014 Pol III subunit C11, C-terminal zinc ribbon
IPR001222 Zinc finger, TFIIS-type
IPR012164 DNA-directed RNA polymerase subunit/transcription factor S
IPR001529 DNA-directed RNA polymerase, M/15kDa subunit
Mapman id Description
35.1 not assigned.annotated