Gene: Sopen05g034290

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen05g034290
  • Transcript Identifier Sopen05g034290.1
  • Gene Type Coding gene
  • Location Spenn-ch05 : 77426400-77428097 : positive

Gene Family Information

  • ID HOM05D006029
  • #Genes/#Species 131/87
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen05g034290.1

Descriptions

  • Description DNA-directed RNA polymerase, subunit M, archaeal | FUNCTIONS IN: in 6 functions | INVOLVED IN: RNA elongation, regulation of transcription, DNA-dependent, transcription, regulation of transcription | LOCATED IN: nucleus, cytoplasm | EXPRESSED IN: male gametophyte | EXPRESSED DURING: M germinated pollen stage | CONTAINS InterPro DOMAIN/s: Zinc finger, TFIIS-type , DNA-directed RNA polymerase, M/15kDa subunit , DNA-directed RNA polymerase, subunit M, archaeal , DNA-directed RNA polymerase M, 15kDa subunit, conserved site | BEST Arabidopsis thaliana protein match is: DNA-directed RNA polymerase, subunit M, archaeal
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006351
IEA
InterProtranscription, DNA-templated
GO:0042779
IEA
InterProtRNA 3'-trailer cleavage

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
InterPronucleic acid binding
GO:0008270
IEA
InterProzinc ion binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT4G07950
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT4G07950

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR012164 DNA-directed RNA polymerase subunit/transcription factor S
IPR034014 Pol III subunit C11, C-terminal zinc ribbon
IPR001222 Zinc finger, TFIIS-type
Mapman id Description
35.1 not assigned.annotated