Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0010114 Camellia sinensis var. sinensis HOM05D004511 ORTHO05D005348 1.5e-68 262.7 128 100.0
Dinv29796 Davidia involucrata HOM05D004511 ORTHO05D005348 1.2e-49 199.9 118 78.0
Actinidia27093 Actinidia chinensis HOM05D004511 ORTHO05D005348 2.5e-47 192.2 118 78.8
CSS0021105 Camellia sinensis var. sinensis HOM05D004511 ORTHO05D005348 1.0e-45 186.8 89 100.0
TAR365G1143 Trochodendron aralioides HOM05D004511 ORTHO05D005348 3.6e-38 161.8 119 65.5
Aqoxy5G00136 Aquilegia oxysepala HOM05D004511 ORTHO05D005348 7.4e-36 154.1 119 62.2
Thecc.04G266800 Theobroma cacao HOM05D004511 ORTHO05D005348 9.7e-36 153.7 119 63.0
QL06p021350 Quercus lobata HOM05D004511 ORTHO05D005348 2.0e-33 146.0 123 61.8
ECA248G2418 Erigeron canadensis HOM05D004511 ORTHO05D005348 2.6e-33 145.6 120 59.2
Gohir.D09G232000 Gossypium hirsutum HOM05D004511 ORTHO05D005348 1.0e-32 143.7 119 57.1
Gorai.006G254800 Gossypium raimondii HOM05D004511 ORTHO05D005348 1.0e-32 143.7 119 57.1
Nn1g02989 Nelumbo nucifera HOM05D004511 ORTHO05D005348 3.8e-32 141.7 118 57.6
Prupe.1G050200 Prunus persica HOM05D004511 ORTHO05D005348 5.0e-32 141.4 120 60.8
Gohir.A09G230900 Gossypium hirsutum HOM05D004511 ORTHO05D005348 6.5e-32 141.0 119 57.1
Duzib151G0197 Durio zibethinus HOM05D004511 ORTHO05D005348 1.4e-31 139.8 119 58.8
COL.COLO4_15984 Corchorus olitorius HOM05D004511 ORTHO05D005348 2.5e-31 139.0 119 58.0
Hund00475 Selenicereus undatus HOM05D004511 ORTHO05D005348 4.2e-31 138.3 120 55.0
THA.LOC104821629 Tarenaya hassleriana HOM05D004511 ORTHO05D005348 5.5e-31 137.9 120 55.8
GSVIVG01027931001 Vitis vinifera HOM05D004511 ORTHO05D005348 5.5e-31 137.9 118 55.1
FvH4_4g05000 Fragaria vesca HOM05D004511 ORTHO05D005348 2.1e-30 136.0 118 55.9
FAN12G0867 Fragaria x ananassa HOM05D004511 ORTHO05D005348 2.1e-30 136.0 118 55.9
Migut.G00563 Erythranthe guttata HOM05D004511 ORTHO05D005348 2.7e-30 135.6 118 55.9
Sopen09g033830 Solanum pennellii HOM05D004511 ORTHO05D005348 3.6e-30 135.2 118 58.5
TWI73G0808 Tripterygium wilfordii HOM05D004511 ORTHO05D005348 3.6e-30 135.2 118 55.9
MD13G1223200 Malus domestica HOM05D004511 ORTHO05D005348 1.0e-29 133.7 119 58.8
Nitab4.5_0005154g0040 Nicotiana tabacum HOM05D004511 ORTHO05D005348 1.4e-29 133.3 120 60.0
Solyc09g090870.3 Solanum lycopersicum HOM05D004511 ORTHO05D005348 1.8e-29 132.9 118 57.6
CARHR100420 Cardamine hirsuta HOM05D004511 ORTHO05D005348 6.7e-29 131.0 121 52.1
Nitab4.5_0001041g0180 Nicotiana tabacum HOM05D004511 ORTHO05D005348 2.0e-28 129.4 120 59.2
MSTRG.9851 Avicennia marina HOM05D004511 ORTHO05D005348 3.3e-28 128.6 118 52.5
RcHm_v2.0_Chr4g0395811 Rosa chinensis HOM05D004511 ORTHO05D005348 4.4e-28 128.3 118 55.1
Potri.010G065000 Populus trichocarpa HOM05D004511 ORTHO05D005348 1.3e-27 126.7 121 52.9
BcaB06g26614 Brassica carinata HOM05D004511 ORTHO05D005348 1.7e-27 126.3 122 52.5
CANSAT78G2334 Cannabis sativa HOM05D004511 ORTHO05D005348 1.7e-27 126.3 119 52.9
CiPaw.01G177000 Carya illinoinensis HOM05D004511 ORTHO05D005348 1.7e-27 126.3 121 53.7
FAN17G0167 Fragaria x ananassa HOM05D004511 ORTHO05D005348 1.7e-27 126.3 117 56.4
HanXRQChr01g0023051 Helianthus annuus HOM05D004511 ORTHO05D005348 2.8e-27 125.6 119 56.3
PGR004G0717 Punica granatum HOM05D004511 ORTHO05D005348 4.8e-27 124.8 120 51.7
Ciclev10004190m.g Citrus clementina HOM05D004511 ORTHO05D005348 6.3e-27 124.4 121 52.9
BolC7t41673H Brassica oleracea HOM05D004511 ORTHO05D005348 1.8e-26 122.9 122 51.6
Ah.01g020260 Amaranthus hybridus HOM05D004511 ORTHO05D005348 2.4e-26 122.5 123 55.3
BcaC06g35683 Brassica carinata HOM05D004511 ORTHO05D005348 2.4e-26 122.5 122 51.6
C07p12050 Brassica napus HOM05D004511 ORTHO05D005348 2.4e-26 122.5 122 51.6
Thhalv10002376m.g Eutrema salsugineum HOM05D004511 ORTHO05D005348 3.1e-26 122.1 122 50.0
A07p07990 Brassica napus HOM05D004511 ORTHO05D005348 4.1e-26 121.7 123 51.2
BraA07t28586Z Brassica rapa HOM05D004511 ORTHO05D005348 4.1e-26 121.7 123 51.2
Carub.0003s2466 Capsella rubella HOM05D004511 ORTHO05D005348 7.0e-26 120.9 122 50.8
Sp3g22130 Schrenkiella parvula HOM05D004511 ORTHO05D005348 7.0e-26 120.9 121 49.6
Sc11g0002730 Simmondsia chinensis HOM05D004511 ORTHO05D005348 7.0e-26 120.9 118 50.8
EL10Ac9g21855 Beta vulgaris HOM05D004511 ORTHO05D005348 9.1e-26 120.6 123 50.4
Lj6g0021678 Lotus japonicus HOM05D004511 ORTHO05D005348 9.1e-26 120.6 119 52.1
AUR62016594 Chenopodium quinoa HOM05D004511 ORTHO05D005348 1.2e-25 120.2 123 50.4
ClCG05G003940 Citrullus lanatus HOM05D004511 ORTHO05D005348 1.5e-25 119.8 120 51.7
arahy.Tifrunner.gnm1.ann1.QET6JI Arachis hypogaea HOM05D004511 ORTHO05D005348 2.6e-25 119.0 128 50.0
Rhsim04G0171100 Rhododendron simsii HOM05D004511 ORTHO05D005348 3.5e-25 118.6 78 69.2
AUR62011461 Chenopodium quinoa HOM05D004511 ORTHO05D005348 5.9e-25 117.9 123 50.4
Aa31LG8G11050 Aethionema arabicum HOM05D004511 ORTHO05D005348 7.7e-25 117.5 120 50.8
Lalb_Chr02g0150721 Lupinus albus HOM05D004511 ORTHO05D005348 1.0e-24 117.1 122 51.6
TPR.G23996 Trifolium pratense HOM05D004511 ORTHO05D005348 1.0e-24 117.1 123 49.6
AL3G39770 Arabidopsis lyrata HOM05D004511 ORTHO05D005348 1.3e-24 116.7 124 49.2
CsaV3_3G011610 Cucumis sativus L. HOM05D004511 ORTHO05D005348 1.7e-24 116.3 122 53.3
arahy.Tifrunner.gnm1.ann1.Z900IQ Arachis hypogaea HOM05D004511 ORTHO05D005348 5.0e-24 114.8 128 47.7
SGA_v2.0_scaffold67G22677 Striga asiatica HOM05D004511 ORTHO05D005348 8.5e-24 114.0 118 50.0
AT3G24320 Arabidopsis thaliana HOM05D004511 ORTHO05D005348 7.2e-23 110.9 123 48.0
Medtr1g045670 Medicago truncatula HOM05D004511 ORTHO05D005348 3.6e-22 108.6 122 49.2
Sed0014740 Sechium edule HOM05D004511 ORTHO05D005348 8.0e-22 107.5 121 49.6
Psat6g108520 Pisum sativum HOM05D004511 ORTHO05D005348 4.4e-20 101.7 120 47.5
Glyma.20G073500 Glycine max HOM05D004511 ORTHO05D005348 5.7e-20 101.3 122 45.9
Cc03_g06420 Coffea canephora HOM05D004511 ORTHO05D005348 2.2e-19 99.4 79 60.8
Haze_11474 Corylus avellana HOM05D004511 ORTHO05D005348 3.7e-19 98.6 67 62.7
Glyma.10G130700 Glycine max HOM05D004511 ORTHO05D005348 4.8e-19 98.2 122 47.5
VMungo0720G1651 Vigna mungo HOM05D004511 ORTHO05D005348 4.8e-19 98.2 122 45.9
ATR0787G210 Amborella trichopoda HOM05D004511 ORTHO05D005348 2.4e-18 95.9 118 39.0
HanXRQChr06g0182821 Helianthus annuus HOM05D004511 ORTHO05D005348 2.4e-18 95.9 127 44.1
Phvul.007G232900 Phaseolus vulgaris HOM05D004511 ORTHO05D005348 4.5e-17 91.7 122 43.4
PSO170G1037 Papaver somniferum HOM05D004511 ORTHO05D005348 7.7e-17 90.9 122 39.3
Peaxi162Scf00531g00610 Petunia axillaris HOM05D004511 ORTHO05D005348 7.7e-17 90.9 75 58.7
Zm00001eb426210 Zea mays HOM05D004511 ORTHO05D005348 7.7e-17 90.9 118 40.7
Ca_26419_v3 Cicer arietinum L. HOM05D004511 ORTHO05D005348 1.3e-16 90.1 68 58.8
PSO210G5810 Papaver somniferum HOM05D004511 ORTHO05D005348 1.1e-15 87.0 120 37.5
unitig_747.g21671 Utricularia gibba HOM05D004511 ORTHO05D005348 1.1e-15 87.0 80 53.8
Os04g0507000 Oryza sativa ssp. japonica HOM05D004511 ORTHO05D005348 4.2e-15 85.1 115 41.7
Ca_07387_v3 Cicer arietinum L. HOM05D004511 ORTHO05D005348 8.0e-14 80.9 50 68.0
HPP92_015182 Vanilla planifolia HOM05D004511 ORTHO05D005348 2.6e-12 75.9 80 46.2
SEGI_11740 Sequoiadendron giganteum HOM05D004511 ORTHO05D005348 9.8e-12 73.9 65 49.2
SEGI_26830 Sequoiadendron giganteum HOM05D004511 ORTHO05D005348 9.8e-12 73.9 65 49.2
Atru.chr4.2014 Acer truncatum HOM05D004511 ORTHO05D005348 1.4e-10 70.1 87 46.0
MELO3C006369.2 Cucumis melo HOM05D004511 ORTHO05D005348 9.4e-07 57.4 118 35.6
Pp3c23_17640 Physcomitrium patens HOM05D004511 ORTHO05D005348 9.4e-07 57.4 97 30.9
SHI00817 Sapria himalayana HOM05D004511 ORTHO05D005348 2.1e-06 56.2 33 72.7
Pp3c8_22090 Physcomitrium patens HOM05D004511 ORTHO05D005348 6.1e-06 54.7 103 34.0


User provided reference genes

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