Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0004825 Camellia sinensis var. sinensis HOM05D004522 ORTHO05D005887 2.8e-66 255.0 118 100.0
CSS0018701 Camellia sinensis var. sinensis HOM05D004522 ORTHO05D005887 2.5e-38 162.2 109 77.1
CSS0037923 Camellia sinensis var. sinensis HOM05D004522 ORTHO05D005887 3.0e-31 138.7 109 69.7
CSS0024449 Camellia sinensis var. sinensis HOM05D004522 ORTHO05D005887 3.1e-28 128.6 68 89.7
CSS0030659 Camellia sinensis var. sinensis HOM05D004522 ORTHO05D005887 1.2e-19 100.1 78 67.9
Dinv38803 Davidia involucrata HOM05D004522 ORTHO05D005887 7.6e-19 97.4 77 64.9
Hma1.2p1_0534F.1_g173690 Hydrangea macrophylla HOM05D004522 ORTHO05D005887 2.2e-18 95.9 77 63.6
Hma1.2p1_1265F.1_g271353 Hydrangea macrophylla HOM05D004522 ORTHO05D005887 2.2e-18 95.9 77 63.6
Dinv37488 Davidia involucrata HOM05D004522 ORTHO05D005887 8.4e-18 94.0 77 63.6
vmacro18846 Vaccinium macrocarpon HOM05D004522 ORTHO05D005887 1.1e-17 93.6 77 61.0
Hma1.2p1_0495F.1_g165690 Hydrangea macrophylla HOM05D004522 ORTHO05D005887 3.2e-17 92.0 77 61.0
Gohir.A06G108300 Gossypium hirsutum HOM05D004522 ORTHO05D005887 5.4e-17 91.3 66 66.7
Gohir.D06G110400 Gossypium hirsutum HOM05D004522 ORTHO05D005887 5.4e-17 91.3 66 66.7
Gorai.010G125500 Gossypium raimondii HOM05D004522 ORTHO05D005887 5.4e-17 91.3 66 66.7
Nn4g23566 Nelumbo nucifera HOM05D004522 ORTHO05D005887 7.1e-17 90.9 77 61.0
CiPaw.07G210600 Carya illinoinensis HOM05D004522 ORTHO05D005887 9.3e-17 90.5 77 62.3
Rhsim08G0228200 Rhododendron simsii HOM05D004522 ORTHO05D005887 1.2e-16 90.1 77 62.3
Cfa013296 Carpinus fangiana HOM05D004522 ORTHO05D005887 2.1e-16 89.4 77 63.6
Eucgr.C02139 Eucalyptus grandis HOM05D004522 ORTHO05D005887 3.5e-16 88.6 79 58.2
Lj8C583T4 Lonicera japonica HOM05D004522 ORTHO05D005887 4.6e-16 88.2 77 61.0
Actinidia21721 Actinidia chinensis HOM05D004522 ORTHO05D005887 6.0e-16 87.8 74 60.8
Oeu005158.2 Olea europaea HOM05D004522 ORTHO05D005887 6.0e-16 87.8 78 61.5
Potri.006G279700 Populus trichocarpa HOM05D004522 ORTHO05D005887 6.0e-16 87.8 77 59.7
Haze_21779 Corylus avellana HOM05D004522 ORTHO05D005887 7.9e-16 87.4 77 62.3
Migut.C00355 Erythranthe guttata HOM05D004522 ORTHO05D005887 7.9e-16 87.4 108 47.2
ECA234G1339 Erigeron canadensis HOM05D004522 ORTHO05D005887 1.3e-15 86.7 77 57.1
Thecc.09G000400 Theobroma cacao HOM05D004522 ORTHO05D005887 1.3e-15 86.7 66 62.1
CANSAT25G3238 Cannabis sativa HOM05D004522 ORTHO05D005887 3.0e-15 85.5 78 60.3
Sabra06G0216700 Salix brachista HOM05D004522 ORTHO05D005887 8.7e-15 84.0 67 61.2
Sc10g0004210 Simmondsia chinensis HOM05D004522 ORTHO05D005887 8.7e-15 84.0 77 54.5
unitig_60.g25825 Utricularia gibba HOM05D004522 ORTHO05D005887 8.7e-15 84.0 66 63.6
AUR62020658 Chenopodium quinoa HOM05D004522 ORTHO05D005887 1.5e-14 83.2 77 57.1
Prupe.1G457500 Prunus persica HOM05D004522 ORTHO05D005887 1.5e-14 83.2 76 57.9
Sed0013871 Sechium edule HOM05D004522 ORTHO05D005887 1.5e-14 83.2 77 57.1
TAR629G0385 Trochodendron aralioides HOM05D004522 ORTHO05D005887 1.5e-14 83.2 77 53.2
AUR62028071 Chenopodium quinoa HOM05D004522 ORTHO05D005887 2.5e-14 82.4 77 55.8
AUR62043895 Chenopodium quinoa HOM05D004522 ORTHO05D005887 2.5e-14 82.4 77 55.8
AUR62044451 Chenopodium quinoa HOM05D004522 ORTHO05D005887 2.5e-14 82.4 77 55.8
RhsimUnG0118700 Rhododendron simsii HOM05D004522 ORTHO05D005887 2.5e-14 82.4 76 56.6
EL10Ac2g03676 Beta vulgaris HOM05D004522 ORTHO05D005887 3.3e-14 82.0 77 54.5
QL12p025652 Quercus lobata HOM05D004522 ORTHO05D005887 3.3e-14 82.0 77 59.7
Lalb_Chr22g0361201 Lupinus albus HOM05D004522 ORTHO05D005887 4.3e-14 81.6 77 54.5
GSVIVG01035576001 Vitis vinifera HOM05D004522 ORTHO05D005887 4.3e-14 81.6 77 61.0
Psat6g033360 Pisum sativum HOM05D004522 ORTHO05D005887 7.4e-14 80.9 77 55.8
Nitab4.5_0000844g0320 Nicotiana tabacum HOM05D004522 ORTHO05D005887 9.6e-14 80.5 78 52.6
ClCG05G026380 Citrullus lanatus HOM05D004522 ORTHO05D005887 1.3e-13 80.1 66 60.6
Ca_01520_v3 Cicer arietinum L. HOM05D004522 ORTHO05D005887 1.6e-13 79.7 77 55.8
Ciclev10007345m.g Citrus clementina HOM05D004522 ORTHO05D005887 1.6e-13 79.7 77 54.5
Atru.chr7.2700 Acer truncatum HOM05D004522 ORTHO05D005887 2.1e-13 79.3 66 57.6
PSO063G2748 Papaver somniferum HOM05D004522 ORTHO05D005887 2.1e-13 79.3 77 57.1
PSO782G1701 Papaver somniferum HOM05D004522 ORTHO05D005887 2.1e-13 79.3 77 57.1
VMungo0251G2701 Vigna mungo HOM05D004522 ORTHO05D005887 2.1e-13 79.3 77 55.8
HanXRQChr16g0521121 Helianthus annuus HOM05D004522 ORTHO05D005887 2.8e-13 79.0 97 48.5
Manes.03G000450 Manihot esculenta HOM05D004522 ORTHO05D005887 2.8e-13 79.0 78 56.4
Solyc02g081910.2 Solanum lycopersicum HOM05D004522 ORTHO05D005887 2.8e-13 79.0 78 51.3
Sopen02g026540 Solanum pennellii HOM05D004522 ORTHO05D005887 2.8e-13 79.0 78 51.3
Sed0008341 Sechium edule HOM05D004522 ORTHO05D005887 3.7e-13 78.6 77 55.8
THA.LOC104819919 Tarenaya hassleriana HOM05D004522 ORTHO05D005887 3.7e-13 78.6 77 51.9
Cpa.g.sc246.4 Carica papaya HOM05D004522 ORTHO05D005887 4.8e-13 78.2 66 59.1
Nitab4.5_0011308g0040 Nicotiana tabacum HOM05D004522 ORTHO05D005887 4.8e-13 78.2 66 56.1
Peaxi162Scf00036g01311 Petunia axillaris HOM05D004522 ORTHO05D005887 4.8e-13 78.2 78 52.6
SGA_v2.0_scaffold62G21366 Striga asiatica HOM05D004522 ORTHO05D005887 4.8e-13 78.2 78 53.8
Lj5g0011494 Lotus japonicus HOM05D004522 ORTHO05D005887 6.2e-13 77.8 77 53.2
RcHm_v2.0_Chr6g0305241 Rosa chinensis HOM05D004522 ORTHO05D005887 6.2e-13 77.8 77 54.5
CAN.G809.41 Capsicum annuum HOM05D004522 ORTHO05D005887 8.1e-13 77.4 78 51.3
Phvul.002G181900 Phaseolus vulgaris HOM05D004522 ORTHO05D005887 8.1e-13 77.4 77 55.8
Ah.14g088390 Amaranthus hybridus HOM05D004522 ORTHO05D005887 1.1e-12 77.0 77 51.9
Migut.E00600 Erythranthe guttata HOM05D004522 ORTHO05D005887 1.8e-12 76.3 79 53.2
FAN20G0828 Fragaria x ananassa HOM05D004522 ORTHO05D005887 1.8e-12 76.3 78 56.4
Glyma.14G137100 Glycine max HOM05D004522 ORTHO05D005887 1.8e-12 76.3 77 53.2
MBI16_g42310_MAGBIO Magnolia biondii HOM05D004522 ORTHO05D005887 1.8e-12 76.3 65 58.5
vmacro20064 Vaccinium macrocarpon HOM05D004522 ORTHO05D005887 1.8e-12 76.3 76 57.9
Hund03258 Selenicereus undatus HOM05D004522 ORTHO05D005887 3.1e-12 75.5 77 50.6
Aa31LG2G19120 Aethionema arabicum HOM05D004522 ORTHO05D005887 4.0e-12 75.1 78 53.8
AT4G31210 Arabidopsis thaliana HOM05D004522 ORTHO05D005887 4.0e-12 75.1 77 49.4
FvH4_2g36580 Fragaria vesca HOM05D004522 ORTHO05D005887 4.0e-12 75.1 77 53.2
FAN27G1482 Fragaria x ananassa HOM05D004522 ORTHO05D005887 4.0e-12 75.1 77 53.2
Aa31LG2G19110 Aethionema arabicum HOM05D004522 ORTHO05D005887 5.3e-12 74.7 77 53.2
CANSAT54G0998 Cannabis sativa HOM05D004522 ORTHO05D005887 5.3e-12 74.7 78 56.4
MD08G1125900 Malus domestica HOM05D004522 ORTHO05D005887 5.3e-12 74.7 76 55.3
arahy.Tifrunner.gnm1.ann1.696W46 Arachis hypogaea HOM05D004522 ORTHO05D005887 6.9e-12 74.3 78 53.8
Glyma.17G196400 Glycine max HOM05D004522 ORTHO05D005887 6.9e-12 74.3 77 53.2
AL7G20870 Arabidopsis lyrata HOM05D004522 ORTHO05D005887 1.2e-11 73.6 77 48.1
Sp7g29090 Schrenkiella parvula HOM05D004522 ORTHO05D005887 1.5e-11 73.2 64 54.7
arahy.Tifrunner.gnm1.ann1.IIX4FM Arachis hypogaea HOM05D004522 ORTHO05D005887 2.0e-11 72.8 78 52.6
BolC1t00764H Brassica oleracea HOM05D004522 ORTHO05D005887 2.0e-11 72.8 65 56.9
Thhalv10024242m.g Eutrema salsugineum HOM05D004522 ORTHO05D005887 2.0e-11 72.8 64 53.1
CARHR239110 Cardamine hirsuta HOM05D004522 ORTHO05D005887 2.6e-11 72.4 77 46.8
BcaNung01535 Brassica carinata HOM05D004522 ORTHO05D005887 4.5e-11 71.6 64 53.1
A03p60590 Brassica napus HOM05D004522 ORTHO05D005887 4.5e-11 71.6 64 53.1
C07p58490 Brassica napus HOM05D004522 ORTHO05D005887 4.5e-11 71.6 64 53.1
BolC7t46304H Brassica oleracea HOM05D004522 ORTHO05D005887 4.5e-11 71.6 64 53.1
BraA03t15100Z Brassica rapa HOM05D004522 ORTHO05D005887 4.5e-11 71.6 64 53.1
Cc09_g04950 Coffea canephora HOM05D004522 ORTHO05D005887 4.5e-11 71.6 79 50.6
BcaC09g51903 Brassica carinata HOM05D004522 ORTHO05D005887 9.9e-11 70.5 65 55.4
A01p07030 Brassica napus HOM05D004522 ORTHO05D005887 9.9e-11 70.5 65 55.4
C01p07770 Brassica napus HOM05D004522 ORTHO05D005887 9.9e-11 70.5 65 55.4
BraA01t00655Z Brassica rapa HOM05D004522 ORTHO05D005887 9.9e-11 70.5 65 55.4
MELO3C003609.2 Cucumis melo HOM05D004522 ORTHO05D005887 9.9e-11 70.5 66 54.5
SalBow1G6309 Salvia bowleyana HOM05D004522 ORTHO05D005887 9.9e-11 70.5 79 54.4
Carub.0007s0933 Capsella rubella HOM05D004522 ORTHO05D005887 1.3e-10 70.1 78 50.0
TWI63G0055 Tripterygium wilfordii HOM05D004522 ORTHO05D005887 2.2e-10 69.3 78 52.6
Psat6g033400 Pisum sativum HOM05D004522 ORTHO05D005887 3.8e-10 68.6 77 48.1
PGSC0003DMG400012781 Solanum tuberosum HOM05D004522 ORTHO05D005887 3.8e-10 68.6 66 51.5
DCAR_006332 Daucus carota HOM05D004522 ORTHO05D005887 8.4e-10 67.4 80 51.2
Actinidia32105 Actinidia chinensis HOM05D004522 ORTHO05D005887 2.4e-09 65.9 58 58.6
TPR.G12110 Trifolium pratense HOM05D004522 ORTHO05D005887 2.4e-09 65.9 79 50.6
TPR.G39482 Trifolium pratense HOM05D004522 ORTHO05D005887 3.2e-09 65.5 82 48.8
COL.COLO4_18648 Corchorus olitorius HOM05D004522 ORTHO05D005887 1.6e-08 63.2 66 50.0
Medtr0229s0020 Medicago truncatula HOM05D004522 ORTHO05D005887 2.1e-08 62.8 79 53.2
Medtr0245s0010 Medicago truncatula HOM05D004522 ORTHO05D005887 2.1e-08 62.8 79 53.2
Medtr1g009315 Medicago truncatula HOM05D004522 ORTHO05D005887 2.1e-08 62.8 79 53.2
CsaV3_3G047220 Cucumis sativus L. HOM05D004522 ORTHO05D005887 4.6e-08 61.6 80 46.2
ATR0691G178 Amborella trichopoda HOM05D004522 ORTHO05D005887 7.9e-08 60.8 77 41.6
Aqoxy3G03771 Aquilegia oxysepala HOM05D004522 ORTHO05D005887 1.3e-07 60.1 79 44.3
MD15G1105700 Malus domestica HOM05D004522 ORTHO05D005887 1.8e-07 59.7 81 48.1
Lsat_1_v5_gn_4_39420 Lactuca sativa HOM05D004522 ORTHO05D005887 3.0e-07 58.9 49 57.1
Medtr1g009570 Medicago truncatula HOM05D004522 ORTHO05D005887 8.7e-07 57.4 76 47.4
HPP92_015554 Vanilla planifolia HOM05D004522 ORTHO05D005887 4.3e-06 55.1 74 39.2


User provided reference genes

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