Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0004697 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 6.1e-48 193.7 93 100.0
CSS0036461 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 1.0e-39 166.4 108 79.6
CSS0036362 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 8.9e-39 163.3 103 80.6
CSS0036951 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 1.1e-36 156.4 100 78.0
CSS0020628 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 1.2e-35 152.9 100 77.0
CSS0050059 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 1.3e-34 149.4 78 88.5
CSS0003623 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 1.6e-32 142.5 93 76.3
Actinidia32206 Actinidia chinensis HOM05D001849 ORTHO05D004689 3.7e-29 131.3 100 64.0
Lj9C535G6 Lonicera japonica HOM05D001849 ORTHO05D004689 5.4e-28 127.5 100 64.0
vmacro15054 Vaccinium macrocarpon HOM05D001849 ORTHO05D004689 9.2e-28 126.7 100 62.0
Rhsim08G0241300 Rhododendron simsii HOM05D001849 ORTHO05D004689 2.7e-27 125.2 101 63.4
GSVIVG01016717001 Vitis vinifera HOM05D001849 ORTHO05D004689 1.0e-26 123.2 100 60.0
Dinv20408 Davidia involucrata HOM05D001849 ORTHO05D004689 6.6e-26 120.6 100 62.0
Hma1.2p1_0229F.1_g096760 Hydrangea macrophylla HOM05D001849 ORTHO05D004689 4.3e-25 117.9 100 59.0
Hma1.2p1_0229F.1_g096770 Hydrangea macrophylla HOM05D001849 ORTHO05D004689 4.3e-25 117.9 100 59.0
Cc04_g01040 Coffea canephora HOM05D001849 ORTHO05D004689 8.1e-24 113.6 104 55.8
Migut.D00924 Erythranthe guttata HOM05D001849 ORTHO05D004689 4.0e-23 111.3 100 54.0
Manes.11G016400 Manihot esculenta HOM05D001849 ORTHO05D004689 1.5e-22 109.4 100 57.0
Eucgr.K02038 Eucalyptus grandis HOM05D001849 ORTHO05D004689 4.4e-22 107.8 101 54.5
QL05p003662 Quercus lobata HOM05D001849 ORTHO05D004689 4.4e-22 107.8 100 52.0
Lalb_Chr10g0101321 Lupinus albus HOM05D001849 ORTHO05D004689 5.8e-22 107.5 100 50.0
Oeu008524.4 Olea europaea HOM05D001849 ORTHO05D004689 1.3e-21 106.3 99 50.5
VMungo0331G1611 Vigna mungo HOM05D001849 ORTHO05D004689 1.7e-21 105.9 100 50.0
Glyma.07G042000 Glycine max HOM05D001849 ORTHO05D004689 2.2e-21 105.5 103 50.5
arahy.Tifrunner.gnm1.ann1.RMM65D Arachis hypogaea HOM05D001849 ORTHO05D004689 3.7e-21 104.8 100 50.0
PGR119G1999 Punica granatum HOM05D001849 ORTHO05D004689 3.7e-21 104.8 101 55.4
TPR.G29992 Trifolium pratense HOM05D001849 ORTHO05D004689 4.9e-21 104.4 100 51.0
DCAR_026423 Daucus carota HOM05D001849 ORTHO05D004689 6.4e-21 104.0 102 52.9
Gohir.A09G079900 Gossypium hirsutum HOM05D001849 ORTHO05D004689 6.4e-21 104.0 100 53.0
Gohir.D09G079550 Gossypium hirsutum HOM05D001849 ORTHO05D004689 6.4e-21 104.0 100 53.0
TWI59G1440 Tripterygium wilfordii HOM05D001849 ORTHO05D004689 8.4e-21 103.6 104 51.0
SalBow7G1889 Salvia bowleyana HOM05D001849 ORTHO05D004689 1.1e-20 103.2 100 54.0
Peaxi162Scf00177g00518 Petunia axillaris HOM05D001849 ORTHO05D004689 1.4e-20 102.8 100 50.0
Phvul.010G127100 Phaseolus vulgaris HOM05D001849 ORTHO05D004689 1.4e-20 102.8 100 49.0
Sabra01G0127400 Salix brachista HOM05D001849 ORTHO05D004689 1.4e-20 102.8 100 55.0
arahy.Tifrunner.gnm1.ann1.1RN2YG Arachis hypogaea HOM05D001849 ORTHO05D004689 3.2e-20 101.7 100 49.0
SGA_v2.0_scaffold4G02078 Striga asiatica HOM05D001849 ORTHO05D004689 4.1e-20 101.3 100 51.0
Nitab4.5_0000189g0010 Nicotiana tabacum HOM05D001849 ORTHO05D004689 5.4e-20 100.9 100 51.0
Duzib192G0006 Durio zibethinus HOM05D001849 ORTHO05D004689 7.1e-20 100.5 100 51.0
Solyc12g049410.3 Solanum lycopersicum HOM05D001849 ORTHO05D004689 7.1e-20 100.5 100 52.0
Sopen12g023890 Solanum pennellii HOM05D001849 ORTHO05D004689 7.1e-20 100.5 100 52.0
Atru.chr2.1505 Acer truncatum HOM05D001849 ORTHO05D004689 9.2e-20 100.1 101 49.5
COL.COLO4_30797 Corchorus olitorius HOM05D001849 ORTHO05D004689 9.2e-20 100.1 100 50.0
EL10Ac7g16444 Beta vulgaris HOM05D001849 ORTHO05D004689 1.2e-19 99.8 104 51.0
AUR62001443 Chenopodium quinoa HOM05D001849 ORTHO05D004689 1.2e-19 99.8 103 52.4
Lj3g0004011 Lotus japonicus HOM05D001849 ORTHO05D004689 1.2e-19 99.8 100 47.0
MD09G1178100 Malus domestica HOM05D001849 ORTHO05D004689 2.1e-19 99.0 101 51.5
Prupe.3G037400 Prunus persica HOM05D001849 ORTHO05D004689 2.7e-19 98.6 100 51.0
AUR62009922 Chenopodium quinoa HOM05D001849 ORTHO05D004689 3.5e-19 98.2 104 51.9
Ca_23411_v3 Cicer arietinum L. HOM05D001849 ORTHO05D004689 3.5e-19 98.2 100 49.0
Psat4g166880 Pisum sativum HOM05D001849 ORTHO05D004689 4.6e-19 97.8 100 48.0
Duzib235G0671 Durio zibethinus HOM05D001849 ORTHO05D004689 6.0e-19 97.4 100 50.0
Ciclev10027090m.g Citrus clementina HOM05D001849 ORTHO05D004689 7.8e-19 97.1 101 49.5
CAN.G1243.9 Capsicum annuum HOM05D001849 ORTHO05D004689 1.0e-18 96.7 100 50.0
MD17G1148600 Malus domestica HOM05D001849 ORTHO05D004689 1.0e-18 96.7 101 51.5
Thecc.06G124800 Theobroma cacao HOM05D001849 ORTHO05D004689 1.0e-18 96.7 100 51.0
Medtr8g022010 Medicago truncatula HOM05D001849 ORTHO05D004689 1.7e-18 95.9 101 47.5
MBI13_g01700_MAGBIO Magnolia biondii HOM05D001849 ORTHO05D004689 2.3e-18 95.5 100 49.0
Cfa003503 Carpinus fangiana HOM05D001849 ORTHO05D004689 3.0e-18 95.1 100 46.0
CiPaw.01G216000 Carya illinoinensis HOM05D001849 ORTHO05D004689 3.0e-18 95.1 100 49.0
Gorai.006G094800 Gossypium raimondii HOM05D001849 ORTHO05D004689 3.0e-18 95.1 100 50.0
CANSAT56G0878 Cannabis sativa HOM05D001849 ORTHO05D004689 3.9e-18 94.7 100 49.0
ATR0681G401 Amborella trichopoda HOM05D001849 ORTHO05D004689 5.1e-18 94.4 100 46.0
Hund18672 Selenicereus undatus HOM05D001849 ORTHO05D004689 1.9e-17 92.4 104 47.1
TAR626G0833 Trochodendron aralioides HOM05D001849 ORTHO05D004689 2.5e-17 92.0 100 48.0
Potri.001G165900 Populus trichocarpa HOM05D001849 ORTHO05D004689 4.3e-17 91.3 100 50.0
PSO386G0179 Papaver somniferum HOM05D001849 ORTHO05D004689 5.6e-17 90.9 100 47.0
PSO724G1390 Papaver somniferum HOM05D001849 ORTHO05D004689 7.3e-17 90.5 100 47.0
Nitab4.5_0004322g0010 Nicotiana tabacum HOM05D001849 ORTHO05D004689 1.2e-16 89.7 94 50.0
RcHm_v2.0_Chr2g0146431 Rosa chinensis HOM05D001849 ORTHO05D004689 2.8e-16 88.6 100 47.0
Aqoxy7G04006 Aquilegia oxysepala HOM05D001849 ORTHO05D004689 6.2e-16 87.4 100 45.0
FvH4_6g35170 Fragaria vesca HOM05D001849 ORTHO05D004689 4.0e-15 84.7 100 46.0
CsaV3_7G034250 Cucumis sativus L. HOM05D001849 ORTHO05D004689 1.2e-14 83.2 100 47.0
FAN09G4066 Fragaria x ananassa HOM05D001849 ORTHO05D004689 1.2e-14 83.2 100 45.0
FAN14G1459 Fragaria x ananassa HOM05D001849 ORTHO05D004689 1.2e-14 83.2 100 45.0
AL3G26350 Arabidopsis lyrata HOM05D001849 ORTHO05D004689 1.5e-14 82.8 100 45.0
Carub.0003s1373 Capsella rubella HOM05D001849 ORTHO05D004689 1.5e-14 82.8 100 45.0
Sed0016273 Sechium edule HOM05D001849 ORTHO05D004689 1.5e-14 82.8 100 48.0
AT3G14120 Arabidopsis thaliana HOM05D001849 ORTHO05D004689 2.0e-14 82.4 100 45.0
unitig_578.g16691 Utricularia gibba HOM05D001849 ORTHO05D004689 2.6e-14 82.0 104 37.5
Thhalv10019957m.g Eutrema salsugineum HOM05D001849 ORTHO05D004689 4.4e-14 81.3 100 44.0
FAN05G2930 Fragaria x ananassa HOM05D001849 ORTHO05D004689 5.8e-14 80.9 100 43.0
ECA232G2821 Erigeron canadensis HOM05D001849 ORTHO05D004689 7.6e-14 80.5 100 48.0
C01p50480 Brassica napus HOM05D001849 ORTHO05D004689 1.3e-13 79.7 104 41.3
BolC1t05000H Brassica oleracea HOM05D001849 ORTHO05D004689 1.3e-13 79.7 104 41.3
Aa31LG8G1350 Aethionema arabicum HOM05D001849 ORTHO05D004689 1.7e-13 79.3 100 44.0
MELO3C024334.2 Cucumis melo HOM05D001849 ORTHO05D004689 1.7e-13 79.3 100 47.0
FAN02G0489 Fragaria x ananassa HOM05D001849 ORTHO05D004689 1.7e-13 79.3 100 43.0
BcaC05g29121 Brassica carinata HOM05D001849 ORTHO05D004689 2.2e-13 79.0 100 44.0
C05p53520 Brassica napus HOM05D001849 ORTHO05D004689 2.2e-13 79.0 100 44.0
HanXRQChr09g0277131 Helianthus annuus HOM05D001849 ORTHO05D004689 2.2e-13 79.0 100 46.0
Cpa.g.sc169.29 Carica papaya HOM05D001849 ORTHO05D004689 2.9e-13 78.6 98 46.9
ClCG09G001140 Citrullus lanatus HOM05D001849 ORTHO05D004689 2.9e-13 78.6 100 44.0
A01p39550 Brassica napus HOM05D001849 ORTHO05D004689 4.9e-13 77.8 104 41.3
BolC5t34029H Brassica oleracea HOM05D001849 ORTHO05D004689 4.9e-13 77.8 100 43.0
BraA05t22343Z Brassica rapa HOM05D001849 ORTHO05D004689 4.9e-13 77.8 100 43.0
Haze_16076 Corylus avellana HOM05D001849 ORTHO05D004689 4.9e-13 77.8 90 41.1
THA.LOC104822664 Tarenaya hassleriana HOM05D001849 ORTHO05D004689 8.4e-13 77.0 100 40.0
A05p35330 Brassica napus HOM05D001849 ORTHO05D004689 4.2e-12 74.7 100 42.0
PGSC0003DMG402004368 Solanum tuberosum HOM05D001849 ORTHO05D004689 1.2e-11 73.2 63 58.7
Sp3g12380 Schrenkiella parvula HOM05D001849 ORTHO05D004689 1.6e-11 72.8 100 38.0
Lsat_1_v5_gn_4_91381 Lactuca sativa HOM05D001849 ORTHO05D004689 6.0e-11 70.9 100 43.0
Zm00001eb165950 Zea mays HOM05D001849 ORTHO05D004689 2.3e-10 68.9 104 38.5
SHI25232 Sapria himalayana HOM05D001849 ORTHO05D004689 2.5e-09 65.5 89 38.2
HPP92_022009 Vanilla planifolia HOM05D001849 ORTHO05D004689 9.6e-09 63.5 100 41.0
SEGI_11558 Sequoiadendron giganteum HOM05D001849 ORTHO05D004689 2.1e-08 62.4 93 40.9


User provided reference genes

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