Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0003403 Camellia sinensis var. sinensis HOM05D001537 ORTHO05D002595 1.0e-53 213.0 99 100.0
CSS0000909 Camellia sinensis var. sinensis HOM05D001537 ORTHO05D002595 2.4e-50 201.8 117 84.6
CSS0046248 Camellia sinensis var. sinensis HOM05D001537 ORTHO05D002595 8.9e-29 130.2 111 63.1
Dinv30509 Davidia involucrata HOM05D001537 ORTHO05D002595 1.0e-24 116.7 111 55.9
Cc04_g03430 Coffea canephora HOM05D001537 ORTHO05D002595 1.1e-23 113.2 113 54.0
vmacro18913 Vaccinium macrocarpon HOM05D001537 ORTHO05D002595 3.3e-23 111.7 110 56.4
Rhsim08G0221300 Rhododendron simsii HOM05D001537 ORTHO05D002595 7.3e-23 110.5 110 57.3
Actinidia08978 Actinidia chinensis HOM05D001537 ORTHO05D002595 1.4e-21 106.3 110 53.6
Prupe.3G071000 Prunus persica HOM05D001537 ORTHO05D002595 1.7e-19 99.4 109 50.5
MBI04_g10462_MAGBIO Magnolia biondii HOM05D001537 ORTHO05D002595 2.2e-19 99.0 105 52.4
Oeu063977.2 Olea europaea HOM05D001537 ORTHO05D002595 2.2e-19 99.0 109 48.6
MSTRG.11077 Avicennia marina HOM05D001537 ORTHO05D002595 1.1e-18 96.7 109 50.5
Ca_01115_v3 Cicer arietinum L. HOM05D001537 ORTHO05D002595 1.1e-18 96.7 110 48.2
HanXRQChr09g0275231 Helianthus annuus HOM05D001537 ORTHO05D002595 1.1e-18 96.7 110 50.9
QL05p024197 Quercus lobata HOM05D001537 ORTHO05D002595 1.9e-18 95.9 110 50.0
RcHm_v2.0_Chr2g0137871 Rosa chinensis HOM05D001537 ORTHO05D002595 1.9e-18 95.9 112 49.1
Nitab4.5_0005851g0070 Nicotiana tabacum HOM05D001537 ORTHO05D002595 2.4e-18 95.5 108 50.0
TPR.G37208 Trifolium pratense HOM05D001537 ORTHO05D002595 3.2e-18 95.1 110 48.2
Cfa002066 Carpinus fangiana HOM05D001537 ORTHO05D002595 4.1e-18 94.7 110 50.0
TPR.G37206 Trifolium pratense HOM05D001537 ORTHO05D002595 4.1e-18 94.7 110 48.2
CANSAT56G0841 Cannabis sativa HOM05D001537 ORTHO05D002595 5.4e-18 94.4 77 62.3
Gohir.D06G194400 Gossypium hirsutum HOM05D001537 ORTHO05D002595 7.0e-18 94.0 119 46.2
Haze_16429 Corylus avellana HOM05D001537 ORTHO05D002595 1.2e-17 93.2 110 49.1
Medtr2g102150 Medicago truncatula HOM05D001537 ORTHO05D002595 1.2e-17 93.2 110 48.2
MD17G1195000 Malus domestica HOM05D001537 ORTHO05D002595 1.6e-17 92.8 108 50.0
Nitab4.5_0000671g0080 Nicotiana tabacum HOM05D001537 ORTHO05D002595 1.6e-17 92.8 120 47.5
Psat5g298960 Pisum sativum HOM05D001537 ORTHO05D002595 1.6e-17 92.8 110 47.3
Nn8g39217 Nelumbo nucifera HOM05D001537 ORTHO05D002595 2.0e-17 92.4 110 49.1
Migut.I00865 Erythranthe guttata HOM05D001537 ORTHO05D002595 2.7e-17 92.0 108 50.9
Thecc.06G087400 Theobroma cacao HOM05D001537 ORTHO05D002595 2.7e-17 92.0 110 48.2
TWI12G1035 Tripterygium wilfordii HOM05D001537 ORTHO05D002595 2.7e-17 92.0 108 49.1
GSVIVG01017108001 Vitis vinifera HOM05D001537 ORTHO05D002595 4.6e-17 91.3 111 48.6
COL.COLO4_30371 Corchorus olitorius HOM05D001537 ORTHO05D002595 6.0e-17 90.9 112 49.1
Duzib235G1517 Durio zibethinus HOM05D001537 ORTHO05D002595 6.0e-17 90.9 110 47.3
SGA_v2.0_scaffold37G14822 Striga asiatica HOM05D001537 ORTHO05D002595 6.0e-17 90.9 121 45.5
Gohir.A06G188300 Gossypium hirsutum HOM05D001537 ORTHO05D002595 7.8e-17 90.5 119 45.4
arahy.Tifrunner.gnm1.ann1.I8FNU5 Arachis hypogaea HOM05D001537 ORTHO05D002595 1.3e-16 89.7 110 45.5
arahy.Tifrunner.gnm1.ann1.YVS4XZ Arachis hypogaea HOM05D001537 ORTHO05D002595 1.3e-16 89.7 110 45.5
EL10Ac9g22000 Beta vulgaris HOM05D001537 ORTHO05D002595 1.3e-16 89.7 110 47.3
CiPaw.01G239300 Carya illinoinensis HOM05D001537 ORTHO05D002595 1.3e-16 89.7 107 47.7
FAN05G3427 Fragaria x ananassa HOM05D001537 ORTHO05D002595 1.3e-16 89.7 112 47.3
Peaxi162Scf00015g00339 Petunia axillaris HOM05D001537 ORTHO05D002595 1.3e-16 89.7 108 47.2
TAR636G3516 Trochodendron aralioides HOM05D001537 ORTHO05D002595 1.3e-16 89.7 104 51.9
Lalb_Chr22g0351281 Lupinus albus HOM05D001537 ORTHO05D002595 1.7e-16 89.4 107 46.7
CAN.G438.67 Capsicum annuum HOM05D001537 ORTHO05D002595 3.9e-16 88.2 108 46.3
Gorai.010G228200 Gossypium raimondii HOM05D001537 ORTHO05D002595 3.9e-16 88.2 119 44.5
Potri.001G180200 Populus trichocarpa HOM05D001537 ORTHO05D002595 3.9e-16 88.2 110 47.3
Ciclev10024801m.g Citrus clementina HOM05D001537 ORTHO05D002595 5.0e-16 87.8 77 57.1
AUR62011630 Chenopodium quinoa HOM05D001537 ORTHO05D002595 6.6e-16 87.4 110 47.3
Atru.chr1.3271 Acer truncatum HOM05D001537 ORTHO05D002595 8.6e-16 87.0 77 58.4
ECA232G0385 Erigeron canadensis HOM05D001537 ORTHO05D002595 8.6e-16 87.0 110 45.5
Lj3g0003193 Lotus japonicus HOM05D001537 ORTHO05D002595 8.6e-16 87.0 77 54.5
FvH4_6g31180 Fragaria vesca HOM05D001537 ORTHO05D002595 1.1e-15 86.7 112 46.4
DCAR_016222 Daucus carota HOM05D001537 ORTHO05D002595 1.5e-15 86.3 76 57.9
Sc21g0005110 Simmondsia chinensis HOM05D001537 ORTHO05D002595 1.5e-15 86.3 110 43.6
AUR62016445 Chenopodium quinoa HOM05D001537 ORTHO05D002595 3.3e-15 85.1 94 51.1
FAN14G4499 Fragaria x ananassa HOM05D001537 ORTHO05D002595 4.3e-15 84.7 112 46.4
PSO210G1376 Papaver somniferum HOM05D001537 ORTHO05D002595 4.3e-15 84.7 106 47.2
Manes.11G047500 Manihot esculenta HOM05D001537 ORTHO05D002595 7.3e-15 84.0 108 45.4
Ah.01g021390 Amaranthus hybridus HOM05D001537 ORTHO05D002595 2.1e-14 82.4 110 44.5
Glyma.13G359400 Glycine max HOM05D001537 ORTHO05D002595 2.8e-14 82.0 77 50.6
Sopen03g039070 Solanum pennellii HOM05D001537 ORTHO05D002595 2.8e-14 82.0 108 44.4
SalBow2G3154 Salvia bowleyana HOM05D001537 ORTHO05D002595 3.6e-14 81.6 108 45.4
Solyc03g120200.2 Solanum lycopersicum HOM05D001537 ORTHO05D002595 3.6e-14 81.6 108 44.4
PGR102G0923 Punica granatum HOM05D001537 ORTHO05D002595 6.2e-14 80.9 110 44.5
unitig_62.g23603 Utricularia gibba HOM05D001537 ORTHO05D002595 8.1e-14 80.5 117 43.6
ClCG09G002140 Citrullus lanatus HOM05D001537 ORTHO05D002595 1.8e-13 79.3 92 48.9
Hund06612 Selenicereus undatus HOM05D001537 ORTHO05D002595 2.3e-13 79.0 93 48.4
CsaV3_7G033170 Cucumis sativus L. HOM05D001537 ORTHO05D002595 3.1e-13 78.6 92 48.9
Aqoxy7G03786 Aquilegia oxysepala HOM05D001537 ORTHO05D002595 5.2e-13 77.8 103 45.6
Phvul.005G171300 Phaseolus vulgaris HOM05D001537 ORTHO05D002595 1.5e-12 76.3 77 49.4
Zm00001eb161030 Zea mays HOM05D001537 ORTHO05D002595 1.5e-12 76.3 71 57.7
Sed0016827 Sechium edule HOM05D001537 ORTHO05D002595 2.6e-12 75.5 84 51.2
VMungo1080G0222 Vigna mungo HOM05D001537 ORTHO05D002595 2.6e-12 75.5 105 42.9
MELO3C024231.2 Cucumis melo HOM05D001537 ORTHO05D002595 7.5e-12 73.9 71 56.3
Eucgr.F03013 Eucalyptus grandis HOM05D001537 ORTHO05D002595 1.3e-11 73.2 109 42.2
HPP92_022952 Vanilla planifolia HOM05D001537 ORTHO05D002595 2.9e-11 72.0 73 50.7
PSO210G2103 Papaver somniferum HOM05D001537 ORTHO05D002595 3.7e-11 71.6 92 46.7
THA.LOC104812517 Tarenaya hassleriana HOM05D001537 ORTHO05D002595 1.1e-10 70.1 118 37.3
BcaC08g47564 Brassica carinata HOM05D001537 ORTHO05D002595 1.9e-10 69.3 77 46.8
CSS0039897 Camellia sinensis var. sinensis HOM05D001537 ORTHO05D002595 1.9e-10 69.3 55 65.5
Thhalv10018072m.g Eutrema salsugineum HOM05D001537 ORTHO05D002595 4.1e-10 68.2 76 46.1
Mapoly0076s0066 Marchantia polymorpha HOM05D001537 ORTHO05D002595 4.1e-10 68.2 61 57.4
AagrBONN_evm.TU.Sc2ySwM_117.2492 Anthoceros agrestis HOM05D001537 ORTHO05D002595 7.1e-10 67.4 93 45.2
CARHR074520 Cardamine hirsuta HOM05D001537 ORTHO05D002595 1.2e-09 66.6 77 45.5
AT1G79950 Arabidopsis thaliana HOM05D001537 ORTHO05D002595 1.6e-09 66.2 77 45.5
BcaC08g45278 Brassica carinata HOM05D001537 ORTHO05D002595 1.6e-09 66.2 75 45.3
C06p28800 Brassica napus HOM05D001537 ORTHO05D002595 1.6e-09 66.2 75 45.3
Sp5g35730 Schrenkiella parvula HOM05D001537 ORTHO05D002595 1.6e-09 66.2 76 44.7
A07p26410 Brassica napus HOM05D001537 ORTHO05D002595 2.7e-09 65.5 75 45.3
BraA07t30285Z Brassica rapa HOM05D001537 ORTHO05D002595 2.7e-09 65.5 75 45.3
AL2G41590 Arabidopsis lyrata HOM05D001537 ORTHO05D002595 3.5e-09 65.1 75 45.3
Pp3c18_12550 Physcomitrium patens HOM05D001537 ORTHO05D002595 7.8e-09 63.9 68 52.9
ATR1120G122 Amborella trichopoda HOM05D001537 ORTHO05D002595 1.7e-08 62.8 91 45.1
SMO364G0359 Selaginella moellendorffii HOM05D001537 ORTHO05D002595 2.3e-08 62.4 59 55.9
Carub.0002s2755 Capsella rubella HOM05D001537 ORTHO05D002595 5.1e-08 61.2 75 42.7
C06p54320 Brassica napus HOM05D001537 ORTHO05D002595 6.6e-08 60.8 78 42.3
BolC6t40443H Brassica oleracea HOM05D001537 ORTHO05D002595 6.6e-08 60.8 78 42.3
BcaC08g47594 Brassica carinata HOM05D001537 ORTHO05D002595 1.5e-07 59.7 76 42.1
Lj5A60G63 Lonicera japonica HOM05D001537 ORTHO05D002595 2.1e-06 55.8 55 54.5
CBR_g3463 Chara braunii HOM05D001537 ORTHO05D000002 2.8e-06 55.5 59 54.2
Aa31LG4G260 Aethionema arabicum HOM05D001537 ORTHO05D002595 3.6e-06 55.1 75 38.7
Lsat_1_v5_gn_4_103661 Lactuca sativa HOM05D001537 ORTHO05D002595 3.6e-06 55.1 61 47.5


User provided reference genes

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