Gene: HPP92_022952

General Information

Structural Information

  • Species Vanilla planifolia
  • Gene Identifier HPP92_022952
  • Transcript Identifier Vpl12Ag22952.1
  • Gene Type Coding gene
  • Location CM028161.1 : 28182233-28250831 : negative

Gene Family Information

  • ID HOM05D001537
  • #Genes/#Species 414/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Vpl12Ag22952.1
  • pid KAG0457795.1

Descriptions

  • Description Regulator of telomere elongation helicase 1 ***
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006260
ISO
PLAZA Integrative OrthologyDNA replication AT1G79950
GO:0010569
ISO
PLAZA Integrative Orthologyregulation of double-strand break repair via homologous recombination AT1G79950
GO:0016070
ISO
PLAZA Integrative OrthologyRNA metabolic process Solyc03g120200.2
GO:0048364
ISO
PLAZA Integrative Orthologyroot development AT1G79950
GO:0045910
ISO
PLAZA Integrative Orthologynegative regulation of DNA recombination AT1G79950
GO:0043007
ISO
PLAZA Integrative Orthologymaintenance of rDNA AT1G79950
GO:0000723
ISO
PLAZA Integrative Orthologytelomere maintenance AT1G79950
GO:0009555
ISO
PLAZA Integrative Orthologypollen development AT1G79950
GO:0006310
ISO
PLAZA Integrative OrthologyDNA recombination AT1G79950
GO:0000725
ISO
PLAZA Integrative Orthologyrecombinational repair AT1G79950
GO:0036297
ISO
PLAZA Integrative Orthologyinterstrand cross-link repair AT1G79950
GO:0070716
ISO
PLAZA Integrative Orthologymismatch repair involved in maintenance of fidelity involved in DNA-dependent DNA replication AT1G79950
GO:0006281
ISO
PLAZA Integrative OrthologyDNA repair AT1G79950
GO:0006139
IEA
InterPronucleobase-containing compound metabolic process
GO:0006412
IEA
InterProtranslation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003724
ISO
PLAZA Integrative OrthologyRNA helicase activity Solyc03g120200.2
GO:0003735
IEA
InterProstructural constituent of ribosome
GO:0003677
IEA
InterProDNA binding
GO:0003678
IEA
InterProDNA helicase activity
GO:0016818
IEA
InterProhydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
GO:0005524
IEA
InterProATP binding
GO:0004386
IEA
InterProhelicase activity
GO:0003676
IEA
InterPronucleic acid binding
GO:0008097
IEA
InterPro5S rRNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005739
ISO
PLAZA Integrative Orthologymitochondrion AT1G79950
GO:0005840
IEA
InterProribosome

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR020057 Ribosomal protein L25, beta domain
IPR029751 Ribosomal protein L25
IPR006555 ATP-dependent helicase, C-terminal
IPR013020 ATP-dependent helicase Rad3/Chl1-like
IPR037121 Ribosomal protein L25, C-terminal
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR010614 DEAD2
IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily
IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal
IPR045028 Helicase superfamily 1/2, DinG/Rad3-like
IPR006554 Helicase-like, DEXD box c2 type
Mapman id Description
13.1.2.6 Cell cycle organisation.cell cycle control.regulation.regulatory helicase (RTEL)