Gene: CSS0046248
General Information
Structural Information
- Species Camellia sinensis var. sinensis
- Gene Identifier CSS0046248
- Transcript Identifier CSS0046248.1
- Gene Type Coding gene
- Location Contig604 : 106819-131512 : negative
Gene Family Information
- ID HOM05D001537
- #Genes/#Species 414/100
- Phylogenetic origin
- ID ORTHO05D002595
- #Genes/#Species 276/99
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- tid CSS0046248.1
Descriptions
- Description PREDICTED: regulator of telomere elongation helicase 1 homolog [Vitis vinifera]
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000725 | ISO | PLAZA Integrative Orthology | recombinational repair | AT1G79950 |
| GO:0010569 | ISO | PLAZA Integrative Orthology | regulation of double-strand break repair via homologous recombination | AT1G79950 |
| GO:0016070 | ISO | PLAZA Integrative Orthology | RNA metabolic process | Solyc03g120200.2 |
| GO:0048364 | ISO | PLAZA Integrative Orthology | root development | AT1G79950 |
| GO:0045910 | ISO | PLAZA Integrative Orthology | negative regulation of DNA recombination | AT1G79950 |
| GO:0043007 | ISO | PLAZA Integrative Orthology | maintenance of rDNA | AT1G79950 |
| GO:0000723 | ISO | PLAZA Integrative Orthology | telomere maintenance | AT1G79950 |
| GO:0009555 | ISO | PLAZA Integrative Orthology | pollen development | AT1G79950 |
| GO:0006310 | ISO | PLAZA Integrative Orthology | DNA recombination | AT1G79950 |
| GO:0036297 | ISO | PLAZA Integrative Orthology | interstrand cross-link repair | AT1G79950 |
| GO:0006260 | ISO | PLAZA Integrative Orthology | DNA replication | AT1G79950 |
| GO:0070716 | ISO | PLAZA Integrative Orthology | mismatch repair involved in maintenance of fidelity involved in DNA-dependent DNA replication | AT1G79950 |
| GO:0006281 | ISO | PLAZA Integrative Orthology | DNA repair | AT1G79950 |
| GO:0006139 | IEA | InterPro | nucleobase-containing compound metabolic process |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003724 | ISO | PLAZA Integrative Orthology | RNA helicase activity | Solyc03g120200.2 |
| GO:0003677 | IEA | InterPro | DNA binding | |
| GO:0016818 | IEA | InterPro | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | |
| GO:0004386 | IEA | InterPro | helicase activity | |
| GO:0003676 | IEA | InterPro | nucleic acid binding | |
| GO:0005524 | IEA | InterPro | ATP binding | |
| GO:0003678 | IEA | InterPro | DNA helicase activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005739 | ISO | PLAZA Integrative Orthology | mitochondrion | AT1G79950 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR014001 | Helicase superfamily 1/2, ATP-binding domain |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| IPR010614 | DEAD2 |
| IPR006555 | ATP-dependent helicase, C-terminal |
| IPR006554 | Helicase-like, DEXD box c2 type |
| IPR045028 | Helicase superfamily 1/2, DinG/Rad3-like |
| IPR013020 | ATP-dependent helicase Rad3/Chl1-like |
| Mapman id | Description |
|---|---|
| 13.1.2.6 | Cell cycle organisation.cell cycle control.regulation.regulatory helicase (RTEL) |