Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0003126 Camellia sinensis var. sinensis HOM05D005526 ORTHO05D006802 7.2e-198 693.7 356 100.0
Actinidia08810 Actinidia chinensis HOM05D005526 ORTHO05D006802 1.8e-164 582.8 362 85.4
Dinv38097 Davidia involucrata HOM05D005526 ORTHO05D006802 1.3e-162 576.6 363 83.5
CSS0037293 Camellia sinensis var. sinensis HOM05D005526 ORTHO05D006802 1.9e-158 562.8 363 82.6
GSVIVG01017251001 Vitis vinifera HOM05D005526 ORTHO05D006802 5.1e-151 538.1 362 78.5
vmacro16915 Vaccinium macrocarpon HOM05D005526 ORTHO05D006802 2.4e-148 529.3 458 66.4
Rhsim12G0193000 Rhododendron simsii HOM05D005526 ORTHO05D006802 4.0e-148 528.5 442 68.1
Lj5C68G25 Lonicera japonica HOM05D005526 ORTHO05D006802 1.3e-146 523.5 365 76.4
TAR383G0281 Trochodendron aralioides HOM05D005526 ORTHO05D006802 7.9e-144 514.2 363 74.9
Cfa002011 Carpinus fangiana HOM05D005526 ORTHO05D006802 1.9e-142 509.6 362 75.7
Atru.chr1.3093 Acer truncatum HOM05D005526 ORTHO05D006802 8.1e-141 504.2 361 73.7
Duzib235G1092 Durio zibethinus HOM05D005526 ORTHO05D006802 6.4e-138 494.6 362 74.6
Ciclev10025661m.g Citrus clementina HOM05D005526 ORTHO05D006802 8.4e-138 494.2 360 73.1
Thecc.06G073100 Theobroma cacao HOM05D005526 ORTHO05D006802 1.4e-137 493.4 362 74.6
TWI18G0833 Tripterygium wilfordii HOM05D005526 ORTHO05D006802 5.4e-137 491.5 359 73.5
CiPaw.01G244400 Carya illinoinensis HOM05D005526 ORTHO05D006802 1.2e-136 490.3 362 72.4
Nn2g11952 Nelumbo nucifera HOM05D005526 ORTHO05D006802 3.5e-136 488.8 362 71.8
Glyma.15G010400 Glycine max HOM05D005526 ORTHO05D006802 6.7e-135 484.6 360 72.5
Gohir.D06G117200 Gossypium hirsutum HOM05D005526 ORTHO05D006802 4.3e-134 481.9 363 73.6
RcHm_v2.0_Chr2g0136621 Rosa chinensis HOM05D005526 ORTHO05D006802 4.3e-134 481.9 361 71.7
Lj3g0017842 Lotus japonicus HOM05D005526 ORTHO05D006802 9.6e-134 480.7 360 71.4
Gorai.010G134800 Gossypium raimondii HOM05D005526 ORTHO05D006802 1.3e-133 480.3 363 73.3
TWI75G1755 Tripterygium wilfordii HOM05D005526 ORTHO05D006802 1.3e-133 480.3 359 73.3
Glyma.13G363400 Glycine max HOM05D005526 ORTHO05D006802 1.6e-133 479.9 360 71.9
Manes.04G116500 Manihot esculenta HOM05D005526 ORTHO05D006802 1.6e-133 479.9 362 71.8
MD09G1221000 Malus domestica HOM05D005526 ORTHO05D006802 2.8e-133 479.2 363 73.0
COL.COLO4_12896 Corchorus olitorius HOM05D005526 ORTHO05D006802 1.4e-132 476.9 366 72.1
ECA234G2940 Erigeron canadensis HOM05D005526 ORTHO05D006802 4.0e-132 475.3 363 71.9
Gohir.A06G112600 Gossypium hirsutum HOM05D005526 ORTHO05D006802 9.0e-132 474.2 363 73.0
FvH4_6g30340 Fragaria vesca HOM05D005526 ORTHO05D006802 1.7e-130 469.9 362 70.2
Cc04_g04020 Coffea canephora HOM05D005526 ORTHO05D006802 2.2e-130 469.5 362 71.8
FAN02G2127 Fragaria x ananassa HOM05D005526 ORTHO05D006802 2.9e-130 469.2 362 70.4
HanXRQChr10g0303071 Helianthus annuus HOM05D005526 ORTHO05D006802 3.8e-130 468.8 365 72.3
Ca_01085_v3 Cicer arietinum L. HOM05D005526 ORTHO05D006802 9.3e-129 464.2 362 69.3
MBI01_g11875_MAGBIO Magnolia biondii HOM05D005526 ORTHO05D006802 9.3e-129 464.2 362 70.4
DCAR_025483 Daucus carota HOM05D005526 ORTHO05D006802 4.6e-128 461.8 361 70.4
Lalb_Chr14g0373681 Lupinus albus HOM05D005526 ORTHO05D006802 4.6e-128 461.8 361 70.4
Prupe.3G079900 Prunus persica HOM05D005526 ORTHO05D006802 1.8e-127 459.9 375 68.8
Eucgr.J03045 Eucalyptus grandis HOM05D005526 ORTHO05D006802 1.6e-125 453.4 360 68.9
QL05p027824 Quercus lobata HOM05D005526 ORTHO05D006802 2.8e-125 452.6 417 62.6
FAN09G0405 Fragaria x ananassa HOM05D005526 ORTHO05D006802 3.7e-125 452.2 357 69.7
Psat5g300440 Pisum sativum HOM05D005526 ORTHO05D006802 4.8e-125 451.8 361 67.6
arahy.Tifrunner.gnm1.ann1.FYL3MV Arachis hypogaea HOM05D005526 ORTHO05D006802 1.1e-124 450.7 361 68.4
Potri.001G172800 Populus trichocarpa HOM05D005526 ORTHO05D006802 6.9e-124 448.0 366 68.9
Cpa.g.sc336.8 Carica papaya HOM05D005526 ORTHO05D006802 4.5e-123 445.3 362 68.0
Aqoxy7G02084 Aquilegia oxysepala HOM05D005526 ORTHO05D006802 5.8e-123 444.9 359 69.1
MD17G1204400 Malus domestica HOM05D005526 ORTHO05D006802 5.8e-123 444.9 436 60.3
Phvul.005G174900 Phaseolus vulgaris HOM05D005526 ORTHO05D006802 1.3e-122 443.7 360 68.3
CAN.G395.46 Capsicum annuum HOM05D005526 ORTHO05D006802 1.7e-122 443.4 363 69.1
CsaV3_4G001390 Cucumis sativus L. HOM05D005526 ORTHO05D006802 2.9e-122 442.6 361 68.1
Medtr2g103110 Medicago truncatula HOM05D005526 ORTHO05D006802 5.0e-122 441.8 367 66.5
MELO3C017901.2 Cucumis melo HOM05D005526 ORTHO05D006802 1.4e-121 440.3 361 67.9
Dinv30571 Davidia involucrata HOM05D005526 ORTHO05D006802 1.9e-121 439.9 268 85.1
CANSAT56G0953 Cannabis sativa HOM05D005526 ORTHO05D006802 2.5e-121 439.5 360 67.8
Solyc06g067990.3 Solanum lycopersicum HOM05D005526 ORTHO05D006802 3.2e-121 439.1 364 69.8
Sed0002477 Sechium edule HOM05D005526 ORTHO05D006802 7.2e-121 438.0 360 66.7
Sopen06g025270 Solanum pennellii HOM05D005526 ORTHO05D006802 2.1e-120 436.4 364 69.2
TPR.G37284 Trifolium pratense HOM05D005526 ORTHO05D006802 2.1e-120 436.4 367 65.7
Oeu063802.2 Olea europaea HOM05D005526 ORTHO05D006802 3.9e-119 432.2 359 69.1
Hund06580 Selenicereus undatus HOM05D005526 ORTHO05D006802 6.3e-117 424.9 360 65.3
PGR031G1627 Punica granatum HOM05D005526 ORTHO05D006802 1.8e-116 423.3 372 64.2
PSO170G3249 Papaver somniferum HOM05D005526 ORTHO05D006802 2.4e-116 422.9 364 63.7
SalBow2G2365 Salvia bowleyana HOM05D005526 ORTHO05D006802 3.1e-116 422.5 361 63.7
MSTRG.9436 Avicennia marina HOM05D005526 ORTHO05D006802 3.4e-115 419.1 362 63.8
THA.LOC104812497 Tarenaya hassleriana HOM05D005526 ORTHO05D006802 1.7e-114 416.8 364 65.1
VMungo1080G0636 Vigna mungo HOM05D005526 ORTHO05D006802 2.5e-113 412.9 354 63.6
Migut.D01055 Erythranthe guttata HOM05D005526 ORTHO05D006802 5.5e-113 411.8 363 64.2
AUR62016379 Chenopodium quinoa HOM05D005526 ORTHO05D006802 2.4e-108 396.4 362 61.6
AL3G17940 Arabidopsis lyrata HOM05D005526 ORTHO05D006802 3.4e-107 392.5 326 65.6
EL10Ac9g21940 Beta vulgaris HOM05D005526 ORTHO05D006802 3.8e-106 389.0 366 61.2
Sp5g35600 Schrenkiella parvula HOM05D005526 ORTHO05D006802 1.4e-105 387.1 326 65.0
arahy.Tifrunner.gnm1.ann1.IMA97E Arachis hypogaea HOM05D005526 ORTHO05D006802 3.2e-105 386.0 377 59.9
Sc10g0005720 Simmondsia chinensis HOM05D005526 ORTHO05D006802 5.5e-105 385.2 362 60.5
ClCG07G012810 Citrullus lanatus HOM05D005526 ORTHO05D006802 1.2e-104 384.0 327 66.4
CARHR074270 Cardamine hirsuta HOM05D005526 ORTHO05D006802 3.9e-103 379.0 334 62.9
Lsat_1_v5_gn_5_132520 Lactuca sativa HOM05D005526 ORTHO05D006802 3.9e-103 379.0 347 64.0
AL2G41300 Arabidopsis lyrata HOM05D005526 ORTHO05D006802 5.1e-103 378.6 325 64.0
BcaB02g07290 Brassica carinata HOM05D005526 ORTHO05D006802 6.7e-103 378.3 326 64.4
Oeu052283.1 Olea europaea HOM05D005526 ORTHO05D006802 6.7e-103 378.3 334 66.2
SGA_v2.0_scaffold16G07615 Striga asiatica HOM05D005526 ORTHO05D006802 6.7e-103 378.3 329 62.6
Carub.0002s2731 Capsella rubella HOM05D005526 ORTHO05D006802 5.7e-102 375.2 335 61.8
Thhalv10018648m.g Eutrema salsugineum HOM05D005526 ORTHO05D006802 7.4e-102 374.8 326 64.7
AT3G06820 Arabidopsis thaliana HOM05D005526 ORTHO05D006802 1.1e-100 370.9 334 63.5
BraA07t30300Z Brassica rapa HOM05D005526 ORTHO05D006802 2.4e-100 369.8 325 62.8
A07p26570 Brassica napus HOM05D005526 ORTHO05D006802 7.0e-100 368.2 325 62.8
BcaC08g45297 Brassica carinata HOM05D005526 ORTHO05D006802 2.0e-99 366.7 325 62.5
C06p28990 Brassica napus HOM05D005526 ORTHO05D006802 2.6e-99 366.3 325 62.8
BolC6t38065H Brassica oleracea HOM05D005526 ORTHO05D006802 7.7e-99 364.8 325 62.5
CiPaw.02G154800 Carya illinoinensis HOM05D005526 ORTHO05D006802 2.5e-97 359.8 244 78.3
AT1G80210 Arabidopsis thaliana HOM05D005526 ORTHO05D006802 1.0e-95 354.4 291 66.0
unitig_899.g14780 Utricularia gibba HOM05D005526 ORTHO05D006802 1.1e-94 350.9 316 60.8
Aa31LG4G500 Aethionema arabicum HOM05D005526 ORTHO05D006802 3.7e-93 345.9 297 64.3
Nitab4.5_0013710g0010 Nicotiana tabacum HOM05D005526 ORTHO05D006802 6.3e-93 345.1 360 58.6
CDE02G1452 Ceratophyllum demersum HOM05D005526 ORTHO05D006802 3.5e-91 339.3 346 58.4
Nitab4.5_0000620g0060 Nicotiana tabacum HOM05D005526 ORTHO05D006802 6.5e-90 335.1 339 59.3
Peaxi162Scf00207g00731 Petunia axillaris HOM05D005526 ORTHO05D006802 1.9e-89 333.6 362 54.1
AUR62011560 Chenopodium quinoa HOM05D005526 ORTHO05D006802 8.0e-88 328.2 329 58.7
Zm00001eb294490 Zea mays HOM05D005526 ORTHO05D006802 1.4e-84 317.4 362 55.8
Os05g0542600 Oryza sativa ssp. japonica HOM05D005526 ORTHO05D006802 9.1e-84 314.7 355 52.1
ATR1156G007 Amborella trichopoda HOM05D005526 ORTHO05D006802 2.0e-83 313.5 364 54.7
FAN14G4362 Fragaria x ananassa HOM05D005526 ORTHO05D006802 3.5e-83 312.8 301 61.1
HPP92_009843 Vanilla planifolia HOM05D005526 ORTHO05D006802 1.3e-82 310.8 309 56.0
Haze_16513 Corylus avellana HOM05D005526 ORTHO05D006802 9.4e-81 304.7 226 73.5
Ah.01g020810 Amaranthus hybridus HOM05D005526 ORTHO05D006802 4.7e-80 302.4 333 56.8
SEGI_35764 Sequoiadendron giganteum HOM05D005526 ORTHO05D006802 2.0e-78 297.0 362 48.3
SGA_v2.0_scaffold37G14789 Striga asiatica HOM05D005526 ORTHO05D006802 6.4e-61 238.8 292 51.4
CDE01G0292 Ceratophyllum demersum HOM05D005526 ORTHO05D006802 7.0e-60 235.3 321 47.0
Mapoly0053s0043 Marchantia polymorpha HOM05D005526 ORTHO05D006802 1.4e-55 221.1 347 41.8
Pp3c27_4740 Physcomitrium patens HOM05D005526 ORTHO05D006802 1.4e-55 221.1 319 43.9
CBR_g46861 Chara braunii HOM05D005526 ORTHO05D006802 4.1e-52 209.5 338 37.9
Oeu014842.2 Olea europaea HOM05D005526 ORTHO05D006802 2.7e-51 206.8 192 60.9
Sed0012845 Sechium edule HOM05D005526 ORTHO05D006802 1.0e-42 178.3 339 40.4
SMO196G0028 Selaginella moellendorffii HOM05D005526 ORTHO05D006802 6.6e-42 175.6 300 35.7
AagrBONN_evm.TU.Sc2ySwM_368.2431 Anthoceros agrestis HOM05D005526 ORTHO05D006802 8.6e-42 175.3 323 38.1
Zm00001eb342510 Zea mays HOM05D005526 ORTHO05D006802 3.5e-35 153.3 125 66.4
Haze_16512 Corylus avellana HOM05D005526 ORTHO05D006802 1.9e-33 147.5 104 76.9
SalBow8G0881 Salvia bowleyana HOM05D005526 ORTHO05D006802 9.9e-22 108.6 96 61.5
Cre11.g475400 Chlamydomonas reinhardtii HOM05D005526 ORTHO05D006802 1.6e-16 91.3 140 43.6
Pp3c25_2940 Physcomitrium patens HOM05D005526 ORTHO05D311957 7.1e-12 75.9 111 43.2


User provided reference genes

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