Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_37310 Corchorus olitorius HOM05D005564 ORTHO05D006872 5.6e-153 544.3 281 100.0
Duzib084G1177 Durio zibethinus HOM05D005564 ORTHO05D006872 2.4e-124 449.1 259 85.3
Gohir.D07G048900 Gossypium hirsutum HOM05D005564 ORTHO05D006872 4.3e-121 438.3 260 83.5
Gorai.001G052100 Gossypium raimondii HOM05D005564 ORTHO05D006872 1.6e-120 436.4 260 83.1
Thecc.03G145600 Theobroma cacao HOM05D005564 ORTHO05D006872 3.1e-119 432.2 259 82.2
Gohir.A13G032000 Gossypium hirsutum HOM05D005564 ORTHO05D006872 5.8e-118 427.9 260 81.5
Gorai.007G289400 Gossypium raimondii HOM05D005564 ORTHO05D006872 8.4e-117 424.1 259 81.5
Gorai.005G129900 Gossypium raimondii HOM05D005564 ORTHO05D006872 5.5e-116 421.4 260 81.2
Gorai.013G121700 Gossypium raimondii HOM05D005564 ORTHO05D006872 6.9e-111 404.4 260 78.5
Manes.06G130000 Manihot esculenta HOM05D005564 ORTHO05D006872 2.0e-102 376.3 252 72.6
Cfa013601 Carpinus fangiana HOM05D005564 ORTHO05D006872 2.6e-102 375.9 261 71.3
Potri.015G111628 Populus trichocarpa HOM05D005564 ORTHO05D006872 2.9e-101 372.5 287 65.5
Sabra15G0133100 Salix brachista HOM05D005564 ORTHO05D006872 1.4e-100 370.2 263 70.3
Cpa.g.sc13.231 Carica papaya HOM05D005564 ORTHO05D006872 2.5e-100 369.4 261 70.5
Dinv34536 Davidia involucrata HOM05D005564 ORTHO05D006872 1.2e-99 367.1 258 69.0
MD07G1241800 Malus domestica HOM05D005564 ORTHO05D006872 4.6e-99 365.2 259 72.6
GSVIVG01024470001 Vitis vinifera HOM05D005564 ORTHO05D006872 4.6e-99 365.2 264 68.6
TAR629G2772 Trochodendron aralioides HOM05D005564 ORTHO05D006872 6.1e-99 364.8 267 71.5
Haze_22223 Corylus avellana HOM05D005564 ORTHO05D006872 1.4e-98 363.6 261 70.5
FAN06G0976 Fragaria x ananassa HOM05D005564 ORTHO05D006872 1.4e-98 363.6 259 69.9
FvH4_7g26720 Fragaria vesca HOM05D005564 ORTHO05D006872 5.1e-98 361.7 259 68.7
HanXRQChr08g0223121 Helianthus annuus HOM05D005564 ORTHO05D006872 5.7e-97 358.2 266 69.2
HanXRQChr08g0221891 Helianthus annuus HOM05D005564 ORTHO05D006872 9.7e-97 357.5 266 68.8
Prupe.2G270700 Prunus persica HOM05D005564 ORTHO05D006872 1.3e-96 357.1 259 69.9
FAN03G1301 Fragaria x ananassa HOM05D005564 ORTHO05D006872 2.2e-96 356.3 259 67.6
Nitab4.5_0003973g0040 Nicotiana tabacum HOM05D005564 ORTHO05D006872 2.2e-96 356.3 256 70.3
CSS0008072 Camellia sinensis var. sinensis HOM05D005564 ORTHO05D006872 6.3e-96 354.8 258 67.8
Hma1.2p1_1014F.1_g247960 Hydrangea macrophylla HOM05D005564 ORTHO05D006872 1.1e-95 354.0 253 70.0
Hma1.2p1_1305F.1_g274526 Hydrangea macrophylla HOM05D005564 ORTHO05D006872 1.1e-95 354.0 253 70.0
MD07G1243700 Malus domestica HOM05D005564 ORTHO05D006872 2.4e-95 352.8 259 70.3
ECA233G5472 Erigeron canadensis HOM05D005564 ORTHO05D006872 1.5e-94 350.1 266 66.2
Gohir.A07G044400 Gossypium hirsutum HOM05D005564 ORTHO05D006872 1.0e-93 347.4 234 73.9
Ciclev10032148m.g Citrus clementina HOM05D005564 ORTHO05D006872 1.3e-93 347.1 285 63.5
Lalb_Chr19g0127411 Lupinus albus HOM05D005564 ORTHO05D006872 1.7e-93 346.7 257 66.9
VMungo1383G3643 Vigna mungo HOM05D005564 ORTHO05D006872 1.7e-93 346.7 252 67.5
TAR636G1392 Trochodendron aralioides HOM05D005564 ORTHO05D008130 6.5e-93 344.7 264 64.8
Atru.chr6.1979 Acer truncatum HOM05D005564 ORTHO05D006872 1.4e-92 343.6 274 67.5
Atru.chr6.2007 Acer truncatum HOM05D005564 ORTHO05D006872 1.4e-92 343.6 274 67.5
THA.LOC104825050 Tarenaya hassleriana HOM05D005564 ORTHO05D006872 1.4e-92 343.6 257 66.5
TWI39G1038 Tripterygium wilfordii HOM05D005564 ORTHO05D006872 1.4e-92 343.6 253 70.4
Migut.F00541 Erythranthe guttata HOM05D005564 ORTHO05D006872 1.9e-92 343.2 253 67.6
Glyma.01G079300 Glycine max HOM05D005564 ORTHO05D006872 1.9e-92 343.2 252 67.1
Phvul.008G143300 Phaseolus vulgaris HOM05D005564 ORTHO05D006872 1.9e-92 343.2 254 66.5
QL09p027441 Quercus lobata HOM05D005564 ORTHO05D006872 3.2e-92 342.4 259 67.6
TPR.G39148 Trifolium pratense HOM05D005564 ORTHO05D006872 2.7e-91 339.3 271 64.6
arahy.Tifrunner.gnm1.ann1.2T0BFY Arachis hypogaea HOM05D005564 ORTHO05D006872 4.7e-91 338.6 252 67.5
CANSAT56G0249 Cannabis sativa HOM05D005564 ORTHO05D006872 1.0e-90 337.4 256 65.2
Ca_27086_v3 Cicer arietinum L. HOM05D005564 ORTHO05D006872 1.4e-90 337.0 258 65.5
CiPaw.07G183300 Carya illinoinensis HOM05D005564 ORTHO05D006872 3.0e-90 335.9 204 76.0
Hund18321 Selenicereus undatus HOM05D005564 ORTHO05D006872 6.7e-90 334.7 262 66.8
Lj1g0017373 Lotus japonicus HOM05D005564 ORTHO05D006872 1.1e-89 334.0 257 66.9
vmacro19959 Vaccinium macrocarpon HOM05D005564 ORTHO05D006872 3.3e-89 332.4 252 67.5
Phvul.005G030000 Phaseolus vulgaris HOM05D005564 ORTHO05D006872 2.2e-88 329.7 255 63.5
Sp6g13380 Schrenkiella parvula HOM05D005564 ORTHO05D006872 2.8e-88 329.3 260 65.8
Aa31LG3G7670 Aethionema arabicum HOM05D005564 ORTHO05D006872 6.3e-88 328.2 269 62.5
BraSC35t46004Z Brassica rapa HOM05D005564 ORTHO05D006872 6.3e-88 328.2 263 64.3
Thhalv10014247m.g Eutrema salsugineum HOM05D005564 ORTHO05D006872 6.3e-88 328.2 264 64.8
Medtr0053s0020 Medicago truncatula HOM05D005564 ORTHO05D006872 8.2e-88 327.8 263 62.7
PGR042G2925 Punica granatum HOM05D005564 ORTHO05D006872 8.2e-88 327.8 258 67.4
SalBow3G4594 Salvia bowleyana HOM05D005564 ORTHO05D006872 1.1e-87 327.4 252 65.5
A10p07960 Brassica napus HOM05D005564 ORTHO05D006872 1.4e-87 327.0 263 63.9
C09p39850 Brassica napus HOM05D005564 ORTHO05D006872 2.4e-87 326.2 263 63.5
SGA_v2.0_scaffold60G20845 Striga asiatica HOM05D005564 ORTHO05D006872 2.4e-87 326.2 253 65.6
PSO063G5398 Papaver somniferum HOM05D005564 ORTHO05D006872 3.1e-87 325.9 254 61.8
EL10Ac7g17720 Beta vulgaris HOM05D005564 ORTHO05D006872 4.1e-87 325.5 309 56.3
Carub.0008s1121 Capsella rubella HOM05D005564 ORTHO05D006872 4.1e-87 325.5 263 63.5
Ah.08g213710 Amaranthus hybridus HOM05D005564 ORTHO05D006872 5.3e-87 325.1 260 66.2
BcaC04g20726 Brassica carinata HOM05D005564 ORTHO05D006872 5.3e-87 325.1 263 63.1
BolC9t56884H Brassica oleracea HOM05D005564 ORTHO05D006872 5.3e-87 325.1 263 63.1
AL8G25430 Arabidopsis lyrata HOM05D005564 ORTHO05D006872 7.0e-87 324.7 263 65.0
CsaV3_5G005020 Cucumis sativus L. HOM05D005564 ORTHO05D006872 7.0e-87 324.7 257 62.3
AT5G51170 Arabidopsis thaliana HOM05D005564 ORTHO05D006872 1.2e-86 323.9 258 63.6
CARHR256880 Cardamine hirsuta HOM05D005564 ORTHO05D006872 3.5e-86 322.4 263 64.3
Eucgr.A02932 Eucalyptus grandis HOM05D005564 ORTHO05D006872 3.5e-86 322.4 257 65.4
RcHm_v2.0_Chr1g0373311 Rosa chinensis HOM05D005564 ORTHO05D006872 3.5e-86 322.4 224 71.0
ClCG09G010750 Citrullus lanatus HOM05D005564 ORTHO05D006872 4.5e-86 322.0 265 63.8
MSTRG.27230 Avicennia marina HOM05D005564 ORTHO05D006872 5.9e-86 321.6 262 61.8
VMungo1080G0069 Vigna mungo HOM05D005564 ORTHO05D006872 5.9e-86 321.6 294 58.2
BcaB08g35471 Brassica carinata HOM05D005564 ORTHO05D006872 2.9e-85 319.3 259 62.9
Lj8A49G34 Lonicera japonica HOM05D005564 ORTHO05D006872 2.9e-85 319.3 219 73.5
DCAR_020165 Daucus carota HOM05D005564 ORTHO05D006872 3.8e-85 318.9 256 64.5
Oeu030874.1 Olea europaea HOM05D005564 ORTHO05D006872 3.8e-85 318.9 259 63.3
CAN.G309.23 Capsicum annuum HOM05D005564 ORTHO05D006872 1.9e-84 316.6 260 62.3
Cc00_g13030 Coffea canephora HOM05D005564 ORTHO05D006872 1.9e-84 316.6 264 64.4
CSS0031726 Camellia sinensis var. sinensis HOM05D005564 ORTHO05D006872 3.2e-84 315.8 257 65.4
Nn6g33765 Nelumbo nucifera HOM05D005564 ORTHO05D006872 3.2e-84 315.8 271 60.1
PGSC0003DMG400008328 Solanum tuberosum HOM05D005564 ORTHO05D006872 2.7e-83 312.8 260 61.2
Peaxi162Scf00073g01727 Petunia axillaris HOM05D005564 ORTHO05D006872 1.0e-82 310.8 252 64.3
Sopen03g024760 Solanum pennellii HOM05D005564 ORTHO05D006872 1.4e-82 310.5 250 62.4
ClCG01G004820 Citrullus lanatus HOM05D005564 ORTHO05D006872 8.8e-82 307.8 262 60.3
FAN10G0633 Fragaria x ananassa HOM05D005564 ORTHO05D006872 1.5e-81 307.0 224 67.4
Solyc03g093880.3 Solanum lycopersicum HOM05D005564 ORTHO05D006872 3.3e-81 305.8 263 58.9
SHI14145 Sapria himalayana HOM05D005564 ORTHO05D000001 1.3e-80 303.9 256 61.7
MD01G1175500 Malus domestica HOM05D005564 ORTHO05D006872 2.8e-80 302.8 286 55.2
PSO782G4004 Papaver somniferum HOM05D005564 ORTHO05D006872 6.3e-80 301.6 254 59.1
MELO3C005454.2 Cucumis melo HOM05D005564 ORTHO05D006872 1.1e-79 300.8 225 65.8
Sed0010204 Sechium edule HOM05D005564 ORTHO05D006872 2.4e-79 299.7 234 63.2
PSO017G2767 Papaver somniferum HOM05D005564 ORTHO05D006872 3.5e-78 295.8 204 65.7
CDE02G1506 Ceratophyllum demersum HOM05D005564 ORTHO05D006872 1.2e-75 287.3 259 54.4
MD07G1244900 Malus domestica HOM05D005564 ORTHO05D006872 1.0e-74 284.3 175 75.4
ATR0188G007 Amborella trichopoda HOM05D005564 ORTHO05D006872 3.4e-73 279.3 270 53.0
Gorai.006G046400 Gossypium raimondii HOM05D005564 ORTHO05D006872 2.2e-72 276.6 225 67.1
unitig_21.g20780 Utricularia gibba HOM05D005564 ORTHO05D006872 1.4e-71 273.9 266 55.3
Zm00001eb249040 Zea mays HOM05D005564 ORTHO05D006872 1.6e-70 270.4 266 51.5
AUR62008825 Chenopodium quinoa HOM05D005564 ORTHO05D006872 1.5e-68 263.8 169 72.8
Rhsim03G0157100 Rhododendron simsii HOM05D005564 ORTHO05D006872 7.2e-68 261.5 215 63.7
AUR62025416 Chenopodium quinoa HOM05D005564 ORTHO05D006872 3.6e-67 259.2 174 69.5
FAN01G2799 Fragaria x ananassa HOM05D005564 ORTHO05D006872 6.8e-66 255.0 270 53.0
MD07G1243300 Malus domestica HOM05D005564 ORTHO05D006872 1.8e-63 246.9 233 61.4
Medtr0092s0090 Medicago truncatula HOM05D005564 ORTHO05D006872 1.6e-62 243.8 215 59.1
SEGI_35477 Sequoiadendron giganteum HOM05D005564 ORTHO05D006872 1.6e-62 243.8 270 50.0
Nitab4.5_0000103g0380 Nicotiana tabacum HOM05D005564 ORTHO05D006872 5.9e-62 241.9 202 63.4
Sc19g0002740 Simmondsia chinensis HOM05D005564 ORTHO05D006872 1.0e-61 241.1 203 59.6
Nn6g32633 Nelumbo nucifera HOM05D005564 ORTHO05D006872 2.8e-59 233.0 210 58.6
MD07G1245400 Malus domestica HOM05D005564 ORTHO05D006872 1.5e-57 227.3 149 74.5
arahy.Tifrunner.gnm1.ann1.R6MN5Z Arachis hypogaea HOM05D005564 ORTHO05D006872 2.0e-57 226.9 277 47.7
Dinv34539 Davidia involucrata HOM05D005564 ORTHO05D006872 1.1e-52 211.1 280 44.6
Os02g0651000 Oryza sativa ssp. japonica HOM05D005564 ORTHO05D006872 5.6e-52 208.8 166 60.2
SMO145G0164 Selaginella moellendorffii HOM05D005564 ORTHO05D006872 1.1e-50 204.5 244 42.6
Hma1.2p1_1014F.1_g247920 Hydrangea macrophylla HOM05D005564 ORTHO05D006872 6.8e-50 201.8 156 64.1
Gohir.D02G135666 Gossypium hirsutum HOM05D005564 ORTHO05D006872 1.3e-48 197.6 109 87.2
Gohir.D02G130966 Gossypium hirsutum HOM05D005564 ORTHO05D006872 2.9e-48 196.4 137 70.1
AagrBONN_evm.TU.Sc2ySwM_228.2399 Anthoceros agrestis HOM05D005564 ORTHO05D006872 3.7e-48 196.1 227 46.7
Pp3c13_1340 Physcomitrium patens HOM05D005564 ORTHO05D006872 1.1e-44 184.5 212 46.2
Prupe.4G133000 Prunus persica HOM05D005564 ORTHO05D006872 8.1e-43 178.3 170 56.5
CANSAT78G0945 Cannabis sativa HOM05D005564 ORTHO05D006872 1.5e-41 174.1 200 47.5
CDE11G0070 Ceratophyllum demersum HOM05D005564 ORTHO05D006872 3.2e-39 166.4 203 45.8
Aqoxy3G02663 Aquilegia oxysepala HOM05D005564 ORTHO05D006872 2.5e-36 156.8 102 72.5
Rhsim03G0158000 Rhododendron simsii HOM05D005564 ORTHO05D006872 1.2e-35 154.5 256 39.8
Psat3g166160 Pisum sativum HOM05D005564 ORTHO05D006872 1.1e-34 151.4 218 42.7
Psat3g164240 Pisum sativum HOM05D005564 ORTHO05D006872 4.4e-33 146.0 200 45.5
CAN.G1016.1 Capsicum annuum HOM05D005564 ORTHO05D006872 6.4e-32 142.1 88 71.6
Lsat_1_v5_gn_8_13861 Lactuca sativa HOM05D000071 ORTHO05D006872 1.9e-31 140.6 99 68.7
CBR_g31024 Chara braunii HOM05D005564 ORTHO05D006872 9.2e-31 138.3 254 35.8
Mapoly0036s0004 Marchantia polymorpha HOM05D005564 ORTHO05D006872 3.5e-22 109.8 177 40.7
MCO11G677 Micromonas commoda HOM05D005564 ORTHO05D006872 1.3e-16 91.3 207 30.0
Cre01.g041900 Chlamydomonas reinhardtii HOM05D005564 ORTHO05D006872 6.4e-16 89.0 225 28.0
Nn6g32636 Nelumbo nucifera HOM05D005564 ORTHO05D006872 8.4e-16 88.6 62 64.5
Aqoxy3G02664 Aquilegia oxysepala HOM05D000665 ORTHO05D000140 2.8e-11 73.6 46 80.4


User provided reference genes

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