Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE12G0612 Ceratophyllum demersum HOM05D005140 ORTHO05D006288 1.4e-186 656.4 377 100.0
CDE04G2928 Ceratophyllum demersum HOM05D005140 ORTHO05D006288 4.7e-139 498.4 395 79.7
TAR636G3078 Trochodendron aralioides HOM05D005140 ORTHO05D006288 1.8e-122 443.4 333 67.0
Sed0020438 Sechium edule HOM05D005140 ORTHO05D006288 6.4e-120 434.9 320 66.6
MBI04_g46822_MAGBIO Magnolia biondii HOM05D005140 ORTHO05D006288 5.4e-119 431.8 334 65.9
Sed0013740 Sechium edule HOM05D005140 ORTHO05D006288 7.1e-119 431.4 319 67.1
MELO3C003340.2 Cucumis melo HOM05D005140 ORTHO05D006288 1.6e-118 430.3 322 65.8
ClCG09G012630 Citrullus lanatus HOM05D005140 ORTHO05D006288 4.6e-118 428.7 321 66.0
CsaV3_3G049760 Cucumis sativus L. HOM05D005140 ORTHO05D006288 4.6e-118 428.7 322 65.5
Gorai.004G191200 Gossypium raimondii HOM05D005140 ORTHO05D006288 2.3e-117 426.4 328 64.6
Thecc.03G238100 Theobroma cacao HOM05D005140 ORTHO05D006288 3.0e-117 426.0 324 65.4
Manes.01G182900 Manihot esculenta HOM05D005140 ORTHO05D006288 3.9e-117 425.6 323 65.0
Eucgr.D02138 Eucalyptus grandis HOM05D005140 ORTHO05D006288 6.6e-117 424.9 334 62.6
RcHm_v2.0_Chr7g0206411 Rosa chinensis HOM05D005140 ORTHO05D006288 1.1e-116 424.1 329 64.1
Prupe.5G053400 Prunus persica HOM05D005140 ORTHO05D006288 1.5e-116 423.7 328 64.6
MSTRG.13768 Avicennia marina HOM05D005140 ORTHO05D006288 3.3e-116 422.5 329 63.8
Rhsim07G0119600 Rhododendron simsii HOM05D005140 ORTHO05D006288 3.3e-116 422.5 325 63.1
Glyma.01G204000 Glycine max HOM05D005140 ORTHO05D006288 4.3e-116 422.2 325 64.3
Lalb_Chr09g0324091 Lupinus albus HOM05D005140 ORTHO05D006288 5.6e-116 421.8 332 61.4
Cc08_g11170 Coffea canephora HOM05D005140 ORTHO05D006288 9.6e-116 421.0 325 63.7
Gohir.D08G182300 Gossypium hirsutum HOM05D005140 ORTHO05D006288 9.6e-116 421.0 328 64.0
Phvul.002G002400 Phaseolus vulgaris HOM05D005140 ORTHO05D006288 2.1e-115 419.9 329 62.9
SGA_v2.0_scaffold20G09272 Striga asiatica HOM05D005140 ORTHO05D006288 8.1e-115 417.9 347 60.5
Glyma.11G039000 Glycine max HOM05D005140 ORTHO05D006288 1.1e-114 417.5 325 63.7
Dinv28888 Davidia involucrata HOM05D005140 ORTHO05D006288 1.4e-114 417.2 326 64.1
Duzib068G0986 Durio zibethinus HOM05D005140 ORTHO05D006288 1.8e-114 416.8 334 63.2
arahy.Tifrunner.gnm1.ann1.FH98R9 Arachis hypogaea HOM05D005140 ORTHO05D006288 4.0e-114 415.6 329 60.8
arahy.Tifrunner.gnm1.ann1.W7TPG2 Arachis hypogaea HOM05D005140 ORTHO05D006288 4.0e-114 415.6 329 60.8
DCAR_008319 Daucus carota HOM05D005140 ORTHO05D006288 4.0e-114 415.6 324 63.9
CiPaw.12G056200 Carya illinoinensis HOM05D005140 ORTHO05D006288 5.3e-114 415.2 326 62.6
Nn6g33739 Nelumbo nucifera HOM05D005140 ORTHO05D006288 5.3e-114 415.2 331 62.5
Potri.001G149900 Populus trichocarpa HOM05D005140 ORTHO05D006288 5.3e-114 415.2 318 62.9
PSO063G3549 Papaver somniferum HOM05D005140 ORTHO05D006288 6.9e-114 414.8 311 63.3
PGR031G2829 Punica granatum HOM05D005140 ORTHO05D006288 1.2e-113 414.1 328 62.2
Migut.F01520 Erythranthe guttata HOM05D005140 ORTHO05D006288 1.5e-113 413.7 322 63.0
PSO782G2508 Papaver somniferum HOM05D005140 ORTHO05D006288 2.0e-113 413.3 311 63.3
Sabra01G0119900 Salix brachista HOM05D005140 ORTHO05D006288 2.0e-113 413.3 333 62.2
Atru.chr9.1157 Acer truncatum HOM05D005140 ORTHO05D006288 2.6e-113 412.9 326 62.9
QL12p008469 Quercus lobata HOM05D005140 ORTHO05D006288 2.6e-113 412.9 321 62.6
Hund14471 Selenicereus undatus HOM05D005140 ORTHO05D006288 5.8e-113 411.8 321 64.2
Ca_24617_v3 Cicer arietinum L. HOM05D005140 ORTHO05D006288 9.9e-113 411.0 310 63.5
vmacro14121 Vaccinium macrocarpon HOM05D005140 ORTHO05D006288 1.3e-112 410.6 307 65.1
Aqoxy3G02576 Aquilegia oxysepala HOM05D005140 ORTHO05D006288 2.2e-112 409.8 318 65.4
Solyc08g077750.4 Solanum lycopersicum HOM05D005140 ORTHO05D006288 2.9e-112 409.5 323 61.9
FvH4_5g20680 Fragaria vesca HOM05D005140 ORTHO05D006288 3.8e-112 409.1 330 62.4
CANSAT21G2106 Cannabis sativa HOM05D005140 ORTHO05D006288 4.9e-112 408.7 322 62.7
vmacro23518 Vaccinium macrocarpon HOM05D005140 ORTHO05D006288 4.9e-112 408.7 315 63.8
TWI60G0080 Tripterygium wilfordii HOM05D005140 ORTHO05D006288 6.4e-112 408.3 326 62.9
Dinv25152 Davidia involucrata HOM05D005140 ORTHO05D006288 8.4e-112 407.9 326 63.8
FAN13G1317 Fragaria x ananassa HOM05D005140 ORTHO05D006288 8.4e-112 407.9 330 62.4
Hma1.2p1_1672F.1_g296780 Hydrangea macrophylla HOM05D005140 ORTHO05D006288 8.4e-112 407.9 312 64.4
Ciclev10019303m.g Citrus clementina HOM05D005140 ORTHO05D006288 1.1e-111 407.5 325 62.5
Ah.12g053860 Amaranthus hybridus HOM05D005140 ORTHO05D006288 2.4e-111 406.4 317 64.4
FAN04G2093 Fragaria x ananassa HOM05D005140 ORTHO05D006288 3.2e-111 406.0 330 62.1
Peaxi162Scf00301g01111 Petunia axillaris HOM05D005140 ORTHO05D006288 3.2e-111 406.0 332 61.7
Sopen08g026270 Solanum pennellii HOM05D005140 ORTHO05D006288 3.2e-111 406.0 323 61.6
FAN08G1378 Fragaria x ananassa HOM05D005140 ORTHO05D006288 4.2e-111 405.6 330 62.1
FAN18G3556 Fragaria x ananassa HOM05D005140 ORTHO05D006288 5.4e-111 405.2 330 62.1
CAN.G572.25 Capsicum annuum HOM05D005140 ORTHO05D006288 7.1e-111 404.8 323 60.7
COL.COLO4_06693 Corchorus olitorius HOM05D005140 ORTHO05D006288 9.3e-111 404.4 334 62.0
Lsat_1_v5_gn_6_94760 Lactuca sativa HOM05D005140 ORTHO05D006288 9.3e-111 404.4 335 61.5
Psat2g175480 Pisum sativum HOM05D005140 ORTHO05D006288 9.3e-111 404.4 329 60.8
unitig_699.g19774 Utricularia gibba HOM05D005140 ORTHO05D006288 9.3e-111 404.4 306 64.7
Actinidia31490 Actinidia chinensis HOM05D005140 ORTHO05D006288 2.1e-110 403.3 363 58.1
Haze_08349 Corylus avellana HOM05D005140 ORTHO05D006288 6.0e-110 401.7 332 61.7
Lj2g0026795 Lotus japonicus HOM05D005140 ORTHO05D006288 7.9e-110 401.4 330 61.5
TPR.G22969 Trifolium pratense HOM05D005140 ORTHO05D006288 1.3e-109 400.6 328 61.0
Nn1g00730 Nelumbo nucifera HOM05D005140 ORTHO05D006288 3.9e-109 399.1 311 63.7
MD00G1132300 Malus domestica HOM05D005140 ORTHO05D006288 5.1e-109 398.7 328 61.3
MD06G1045500 Malus domestica HOM05D005140 ORTHO05D006288 1.1e-108 397.5 334 59.9
MBI04_g38568_MAGBIO Magnolia biondii HOM05D005140 ORTHO05D006288 2.5e-108 396.4 338 61.5
Sc01g0007900 Simmondsia chinensis HOM05D005140 ORTHO05D006288 5.6e-108 395.2 320 62.8
Gohir.A08G162300 Gossypium hirsutum HOM05D005140 ORTHO05D006288 4.8e-107 392.1 328 61.9
Medtr5g013580 Medicago truncatula HOM05D005140 ORTHO05D006288 3.1e-106 389.4 327 60.6
HPP92_020526 Vanilla planifolia HOM05D005140 ORTHO05D006288 9.0e-106 387.9 301 66.1
BcaNung00074 Brassica carinata HOM05D005140 ORTHO05D006288 3.4e-105 386.0 314 60.5
GSVIVG01013286001 Vitis vinifera HOM05D005140 ORTHO05D006288 3.4e-105 386.0 234 76.9
BcaC06g33554 Brassica carinata HOM05D005140 ORTHO05D006288 9.9e-105 384.4 306 61.1
Sp7g16510 Schrenkiella parvula HOM05D005140 ORTHO05D006288 9.9e-105 384.4 313 60.4
ATR0665G273 Amborella trichopoda HOM05D005140 ORTHO05D006288 2.2e-104 383.3 331 60.1
Carub.0007s2375 Capsella rubella HOM05D005140 ORTHO05D006288 3.8e-104 382.5 312 59.6
AT4G17620 Arabidopsis thaliana HOM05D005140 ORTHO05D006288 4.9e-104 382.1 307 59.9
Os05g0392100 Oryza sativa ssp. japonica HOM05D005140 ORTHO05D006288 4.9e-104 382.1 319 63.3
THA.LOC104798349 Tarenaya hassleriana HOM05D005140 ORTHO05D006288 4.9e-104 382.1 307 60.6
C01p11300 Brassica napus HOM05D005140 ORTHO05D006288 8.4e-104 381.3 306 60.5
ECA240G1687 Erigeron canadensis HOM05D005140 ORTHO05D006288 8.4e-104 381.3 309 59.9
A03p50570 Brassica napus HOM05D005140 ORTHO05D006288 1.1e-103 380.9 311 60.5
EL10Ac5g12239 Beta vulgaris HOM05D005140 ORTHO05D006288 4.2e-103 379.0 357 56.3
BcaNung03452 Brassica carinata HOM05D005140 ORTHO05D006288 1.2e-102 377.5 299 61.5
Nitab4.5_0012059g0010 Nicotiana tabacum HOM05D005140 ORTHO05D006288 7.9e-102 374.8 324 58.0
CARHR224350 Cardamine hirsuta HOM05D005140 ORTHO05D006288 1.0e-101 374.4 311 60.1
Lj9A525T29 Lonicera japonica HOM05D005140 ORTHO05D006288 1.3e-101 374.0 327 60.2
BolC7t45397H Brassica oleracea HOM05D005140 ORTHO05D006288 3.0e-101 372.9 319 58.3
Thhalv10024864m.g Eutrema salsugineum HOM05D005140 ORTHO05D006288 3.0e-101 372.9 307 60.3
BraA03t14147Z Brassica rapa HOM05D005140 ORTHO05D006288 6.7e-101 371.7 309 59.9
C07p48890 Brassica napus HOM05D005140 ORTHO05D006288 1.9e-100 370.2 319 58.0
HanXRQChr03g0089631 Helianthus annuus HOM05D005140 ORTHO05D006288 9.6e-100 367.9 330 57.3
HPP92_028085 Vanilla planifolia HOM05D005140 ORTHO05D006288 1.8e-98 363.6 301 64.1
BraA01t00912Z Brassica rapa HOM05D005140 ORTHO05D006288 4.0e-98 362.5 317 57.7
Nitab4.5_0004689g0020 Nicotiana tabacum HOM05D005140 ORTHO05D006288 2.0e-97 360.1 323 56.3
Aa31LG6G380 Aethionema arabicum HOM05D005140 ORTHO05D006288 1.7e-96 357.1 308 58.4
THA.LOC104814458 Tarenaya hassleriana HOM05D005140 ORTHO05D006288 2.9e-96 356.3 304 59.5
HPP92_022002 Vanilla planifolia HOM05D005140 ORTHO05D006288 2.9e-96 356.3 315 59.7
BcaNung06713 Brassica carinata HOM05D005140 ORTHO05D006288 3.2e-95 352.8 215 74.0
Lj2C253G13 Lonicera japonica HOM05D005140 ORTHO05D006288 3.2e-95 352.8 302 59.3
A01p09690 Brassica napus HOM05D005140 ORTHO05D006288 5.5e-95 352.1 311 57.9
BcaC09g51625 Brassica carinata HOM05D005140 ORTHO05D006288 5.1e-93 345.5 310 56.5
AUR62007191 Chenopodium quinoa HOM05D005140 ORTHO05D006288 2.5e-92 343.2 227 70.5
SGA_v2.0_scaffold6G03141 Striga asiatica HOM05D005140 ORTHO05D006288 9.0e-90 334.7 282 59.6
SHI07711 Sapria himalayana HOM05D005140 ORTHO05D006288 4.5e-89 332.4 306 56.2
VMungo0239G0001 Vigna mungo HOM05D005140 ORTHO05D006288 3.2e-87 326.2 218 70.6
Aa31LG9G15140 Aethionema arabicum HOM05D005140 ORTHO05D006288 1.2e-86 324.3 299 53.8
AUR62018812 Chenopodium quinoa HOM05D005140 ORTHO05D006288 1.3e-85 320.9 192 76.0
Peaxi162Scf00715g00010 Petunia axillaris HOM05D005140 ORTHO05D006288 1.5e-76 290.8 216 66.2
Zm00001eb287280 Zea mays HOM05D005140 ORTHO05D006288 6.3e-75 285.4 195 71.3
AagrBONN_evm.TU.Sc2ySwM_344.2637 Anthoceros agrestis HOM05D005140 ORTHO05D006288 3.1e-74 283.1 247 59.5
GSVIVG01013283001 Vitis vinifera HOM05D005140 ORTHO05D006288 3.9e-69 266.2 245 57.6
Pp3c10_5020 Physcomitrium patens HOM05D005140 ORTHO05D006288 1.2e-65 254.6 333 43.8
Mapoly0062s0029 Marchantia polymorpha HOM05D005140 ORTHO05D006288 3.5e-65 253.1 219 60.7
SMO259G0041 Selaginella moellendorffii HOM05D005140 ORTHO05D006288 2.0e-60 237.3 210 56.2
Cpa.g.sc98.58 Carica papaya HOM05D005140 ORTHO05D006288 1.1e-55 221.5 126 80.2
CBR_g48842 Chara braunii HOM05D005140 ORTHO05D006288 6.1e-54 215.7 207 52.7
BolC1t01096H Brassica oleracea HOM05D005140 ORTHO05D006288 3.7e-43 179.9 102 73.5
Oeu062963.3 Olea europaea HOM05D005140 ORTHO05D006288 2.9e-35 153.7 263 39.5
QL12p008508 Quercus lobata HOM05D005140 ORTHO05D006288 9.2e-34 148.7 155 49.0
Oeu017029.1 Olea europaea HOM05D005140 ORTHO05D006288 9.5e-31 138.7 93 67.7
SEGI_19334 Sequoiadendron giganteum HOM05D005140 ORTHO05D000001 3.4e-28 130.2 78 79.5
Thecc.03G238400 Theobroma cacao HOM05D005140 ORTHO05D006288 7.8e-25 119.0 140 51.4
GSVIVG01001794001 Vitis vinifera HOM05D005140 ORTHO05D006288 1.8e-21 107.8 82 64.6
MD10G1199900 Malus domestica HOM05D005140 ORTHO05D006288 1.3e-19 101.7 60 76.7
MCO13G373 Micromonas commoda HOM05D005140 ORTHO05D006288 2.2e-19 100.9 233 31.3
Cre07.g338400 Chlamydomonas reinhardtii HOM05D005140 ORTHO05D006288 7.8e-17 92.4 220 32.7
DCAR_016064 Daucus carota HOM05D005140 ORTHO05D006288 1.5e-15 88.2 52 76.9
Cpa.g.c32337.2 Carica papaya HOM05D005140 ORTHO05D006288 6.8e-13 79.3 56 67.9
BolC1t01095H Brassica oleracea HOM05D005140 ORTHO05D006288 2.5e-07 60.8 56 55.4


User provided reference genes

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