Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE12G0487 Ceratophyllum demersum HOM05D005363 ORTHO05D006607 1.7e-155 552.7 301 100.0
TAR629G3355 Trochodendron aralioides HOM05D005363 ORTHO05D006607 1.3e-70 270.8 312 55.1
CiPaw.11G177000 Carya illinoinensis HOM05D005363 ORTHO05D006607 8.6e-67 258.1 312 52.2
HPP92_026534 Vanilla planifolia HOM05D005363 ORTHO05D006607 3.3e-66 256.1 307 52.8
Nn1g03887 Nelumbo nucifera HOM05D005363 ORTHO05D006607 1.4e-64 250.8 310 52.6
CANSAT11G0579 Cannabis sativa HOM05D005363 ORTHO05D006607 8.9e-64 248.1 313 51.1
Thecc.07G070700 Theobroma cacao HOM05D005363 ORTHO05D006607 5.8e-63 245.4 318 48.7
QL08p017669 Quercus lobata HOM05D005363 ORTHO05D006607 2.9e-62 243.0 309 51.5
PSO832G2870 Papaver somniferum HOM05D005363 ORTHO05D006607 1.1e-61 241.1 319 51.4
MSTRG.5819 Avicennia marina HOM05D005363 ORTHO05D006607 2.4e-61 240.0 320 47.8
PSO210G7030 Papaver somniferum HOM05D005363 ORTHO05D006607 4.1e-61 239.2 318 50.0
CSS0003917 Camellia sinensis var. sinensis HOM05D005363 ORTHO05D006607 1.6e-60 237.3 281 53.7
ATR0693G020 Amborella trichopoda HOM05D005363 ORTHO05D006607 2.7e-60 236.5 312 51.6
Ciclev10007579m.g Citrus clementina HOM05D005363 ORTHO05D006607 8.6e-59 231.5 318 45.6
HPP92_026561 Vanilla planifolia HOM05D005363 ORTHO05D006607 1.1e-58 231.1 293 52.6
Actinidia35283 Actinidia chinensis HOM05D005363 ORTHO05D006607 9.5e-58 228.0 312 49.7
Glyma.12G219100 Glycine max HOM05D005363 ORTHO05D006607 9.5e-58 228.0 305 49.8
Manes.15G082900 Manihot esculenta HOM05D005363 ORTHO05D006607 1.6e-57 227.3 316 46.8
Duzib170G0704 Durio zibethinus HOM05D005363 ORTHO05D006607 4.7e-57 225.7 313 47.0
Sc03g0009580 Simmondsia chinensis HOM05D005363 ORTHO05D006607 8.0e-57 224.9 316 50.6
Phvul.005G085700 Phaseolus vulgaris HOM05D005363 ORTHO05D006607 8.9e-56 221.5 304 49.7
MBI15_g19746_MAGBIO Magnolia biondii HOM05D005363 ORTHO05D006607 5.8e-55 218.8 284 50.0
Aqoxy1G03881 Aquilegia oxysepala HOM05D005363 ORTHO05D006607 2.9e-54 216.5 312 48.7
PGR083G1158 Punica granatum HOM05D005363 ORTHO05D006607 2.9e-54 216.5 317 47.6
RcHm_v2.0_Chr5g0036071 Rosa chinensis HOM05D005363 ORTHO05D006607 6.4e-54 215.3 309 46.6
MD11G1235900 Malus domestica HOM05D005363 ORTHO05D006607 1.9e-53 213.8 309 47.9
EL10Ac4g08052 Beta vulgaris HOM05D005363 ORTHO05D006607 7.0e-53 211.8 297 49.5
Gorai.009G430700 Gossypium raimondii HOM05D005363 ORTHO05D006607 7.0e-53 211.8 309 47.2
Migut.J00972 Erythranthe guttata HOM05D005363 ORTHO05D006607 1.6e-52 210.7 317 46.1
GSVIVG01014441001 Vitis vinifera HOM05D005363 ORTHO05D006607 2.7e-52 209.9 316 46.2
Potri.001G407300 Populus trichocarpa HOM05D005363 ORTHO05D006607 7.8e-52 208.4 318 45.3
Prupe.4G191100 Prunus persica HOM05D005363 ORTHO05D006607 1.3e-51 207.6 308 46.1
Nitab4.5_0007366g0050 Nicotiana tabacum HOM05D005363 ORTHO05D006607 1.7e-51 207.2 257 49.8
Oeu009902.1 Olea europaea HOM05D005363 ORTHO05D006607 3.0e-51 206.5 319 46.1
Psat2g184560 Pisum sativum HOM05D005363 ORTHO05D006607 3.9e-51 206.1 304 46.7
COL.COLO4_09485 Corchorus olitorius HOM05D005363 ORTHO05D006607 5.1e-51 205.7 318 45.9
FAN21G3123 Fragaria x ananassa HOM05D005363 ORTHO05D006607 5.1e-51 205.7 302 45.7
Gohir.D05G362100 Gossypium hirsutum HOM05D005363 ORTHO05D006607 1.1e-50 204.5 309 46.3
Gohir.D01G056400 Gossypium hirsutum HOM05D005363 ORTHO05D006607 1.5e-50 204.1 318 45.0
Atru.chr2.2912 Acer truncatum HOM05D005363 ORTHO05D006607 2.5e-50 203.4 304 45.7
SalBow3G2312 Salvia bowleyana HOM05D005363 ORTHO05D006607 3.3e-50 203.0 343 43.4
arahy.Tifrunner.gnm1.ann1.42XSYF Arachis hypogaea HOM05D005363 ORTHO05D006607 5.6e-50 202.2 308 46.4
ECA240G2604 Erigeron canadensis HOM05D005363 ORTHO05D006607 5.6e-50 202.2 310 44.8
arahy.Tifrunner.gnm1.ann1.3P80NP Arachis hypogaea HOM05D005363 ORTHO05D006607 7.3e-50 201.8 301 46.5
Lalb_Chr25g0286791 Lupinus albus HOM05D005363 ORTHO05D006607 2.1e-49 200.3 303 47.2
MD03G1218100 Malus domestica HOM05D005363 ORTHO05D006607 4.7e-49 199.1 307 45.6
HanXRQChr03g0077211 Helianthus annuus HOM05D005363 ORTHO05D006607 6.2e-49 198.7 312 43.9
Cpa.g.sc12.44 Carica papaya HOM05D005363 ORTHO05D006607 8.1e-49 198.4 279 47.7
Gorai.002G076500 Gossypium raimondii HOM05D005363 ORTHO05D006607 2.3e-48 196.8 314 45.2
Zm00001eb069270 Zea mays HOM05D005363 ORTHO05D006607 4.0e-48 196.1 312 50.0
CAN.G824.3 Capsicum annuum HOM05D005363 ORTHO05D006607 5.2e-48 195.7 256 48.0
Peaxi162Scf00290g00111 Petunia axillaris HOM05D005363 ORTHO05D006607 5.2e-48 195.7 256 48.4
Medtr2g081100 Medicago truncatula HOM05D005363 ORTHO05D006607 6.8e-48 195.3 267 48.3
FvH4_3g21040 Fragaria vesca HOM05D005363 ORTHO05D006607 2.6e-47 193.4 307 43.3
Gohir.A04G026000 Gossypium hirsutum HOM05D005363 ORTHO05D006607 2.6e-47 193.4 307 43.3
FAN11G3021 Fragaria x ananassa HOM05D005363 ORTHO05D006607 3.4e-47 193.0 307 43.3
Dinv08347 Davidia involucrata HOM05D005363 ORTHO05D006607 9.9e-47 191.4 331 43.2
Eucgr.F01076 Eucalyptus grandis HOM05D005363 ORTHO05D006607 9.9e-47 191.4 313 44.1
Haze_09533 Corylus avellana HOM05D005363 ORTHO05D006607 1.3e-46 191.0 356 42.1
ClCG11G018480 Citrullus lanatus HOM05D005363 ORTHO05D006607 2.2e-46 190.3 295 47.1
Gohir.A04G025700 Gossypium hirsutum HOM05D005363 ORTHO05D006607 2.9e-46 189.9 311 46.3
vmacro09564 Vaccinium macrocarpon HOM05D005363 ORTHO05D006607 2.9e-46 189.9 268 49.3
CsaV3_3G044350 Cucumis sativus L. HOM05D005363 ORTHO05D006607 2.4e-45 186.8 305 45.6
Lj3g0015043 Lotus japonicus HOM05D005363 ORTHO05D006607 2.4e-45 186.8 304 43.1
Hma1.2p1_1176F.1_g264200 Hydrangea macrophylla HOM05D005363 ORTHO05D006607 4.1e-45 186.0 304 45.7
Sed0012869 Sechium edule HOM05D005363 ORTHO05D006607 2.1e-44 183.7 298 46.6
SGA_v2.0_scaffold13G06767 Striga asiatica HOM05D005363 ORTHO05D006607 3.5e-44 183.0 328 41.2
MELO3C018187.2 Cucumis melo HOM05D005363 ORTHO05D006607 1.0e-43 181.4 300 44.3
SHI33827 Sapria himalayana HOM05D005363 ORTHO05D006607 3.9e-43 179.5 308 43.5
DCAR_018424 Daucus carota HOM05D005363 ORTHO05D006607 1.9e-42 177.2 273 48.7
Lsat_1_v5_gn_9_95600 Lactuca sativa HOM05D005363 ORTHO05D006607 1.9e-42 177.2 319 42.6
FAN25G3415 Fragaria x ananassa HOM05D005363 ORTHO05D006607 7.3e-42 175.3 310 41.0
unitig_8.g4146 Utricularia gibba HOM05D005363 ORTHO05D006607 1.6e-41 174.1 317 39.7
Os04g0635900 Oryza sativa ssp. japonica HOM05D005363 ORTHO05D006607 2.1e-41 173.7 309 44.0
RhsimUnG0258300 Rhododendron simsii HOM05D005363 ORTHO05D006607 2.8e-41 173.3 244 49.2
Sp6g16300 Schrenkiella parvula HOM05D005363 ORTHO05D006607 1.1e-40 171.4 237 49.4
Aa31LG3G10220 Aethionema arabicum HOM05D005363 ORTHO05D006607 1.8e-40 170.6 307 43.3
CARHR267540 Cardamine hirsuta HOM05D005363 ORTHO05D006607 1.8e-40 170.6 308 42.2
TPR.G32857 Trifolium pratense HOM05D005363 ORTHO05D006607 4.0e-40 169.5 206 51.0
Hund02186 Selenicereus undatus HOM05D005363 ORTHO05D006607 6.8e-40 168.7 302 43.4
Sopen09g004090 Solanum pennellii HOM05D005363 ORTHO05D006607 3.8e-38 162.9 150 58.0
Thhalv10012804m.g Eutrema salsugineum HOM05D005363 ORTHO05D006607 4.9e-38 162.5 232 48.7
AL8G29590 Arabidopsis lyrata HOM05D005363 ORTHO05D006607 2.4e-37 160.2 312 41.0
BcaC04g20356 Brassica carinata HOM05D005363 ORTHO05D006607 4.2e-37 159.5 229 48.0
Sabra16G0268700 Salix brachista HOM05D005363 ORTHO05D006607 5.4e-37 159.1 305 41.0
Lj8C160T16 Lonicera japonica HOM05D005363 ORTHO05D006607 1.6e-36 157.5 325 43.1
BcaB08g35781 Brassica carinata HOM05D005363 ORTHO05D006607 4.6e-36 156.0 232 46.6
AT5G54260 Arabidopsis thaliana HOM05D005363 ORTHO05D006607 1.0e-35 154.8 226 47.8
Eucgr.C01186 Eucalyptus grandis HOM05D005363 ORTHO05D006607 2.3e-35 153.7 313 39.9
SEGI_35588 Sequoiadendron giganteum HOM05D005363 ORTHO05D006607 6.6e-35 152.1 292 40.8
Ca_01800_v3 Cicer arietinum L. HOM05D005363 ORTHO05D006607 1.1e-34 151.4 253 43.1
Sabra16G0270900 Salix brachista HOM05D005363 ORTHO05D006607 1.5e-34 151.0 254 44.9
Ca_30473_v3 Cicer arietinum L. HOM05D005363 ORTHO05D006607 5.6e-34 149.1 223 44.8
BolC9t57330H Brassica oleracea HOM05D005363 ORTHO05D006607 9.6e-34 148.3 235 45.5
BraA10t43250Z Brassica rapa HOM05D005363 ORTHO05D006607 1.2e-33 147.9 238 46.6
Carub.0008s1460 Capsella rubella HOM05D005363 ORTHO05D006607 1.6e-33 147.5 192 49.5
A10p11550 Brassica napus HOM05D005363 ORTHO05D006607 4.7e-33 146.0 204 48.5
C09p44570 Brassica napus HOM05D005363 ORTHO05D006607 4.7e-33 146.0 204 48.5
Nitab4.5_0001969g0080 Nicotiana tabacum HOM05D005363 ORTHO05D006607 6.2e-33 145.6 277 40.4
THA.LOC104813315 Tarenaya hassleriana HOM05D005363 ORTHO05D006607 8.1e-33 145.2 120 64.2
Cc06_g05460 Coffea canephora HOM05D005363 ORTHO05D006607 5.3e-32 142.5 88 78.4
AUR62015595 Chenopodium quinoa HOM05D005363 ORTHO05D006607 5.6e-26 122.5 180 42.2
GSVIVG01001519001 Vitis vinifera HOM05D005363 ORTHO05D006607 1.6e-25 120.9 91 65.9
Mapoly0023s0117 Marchantia polymorpha HOM05D005363 ORTHO05D006607 3.1e-24 116.7 341 37.5
AUR62029306 Chenopodium quinoa HOM05D005363 ORTHO05D006607 9.0e-24 115.2 272 36.8
Pp3c24_2350 Physcomitrium patens HOM05D005363 ORTHO05D006607 4.2e-21 106.3 164 39.6
AagrBONN_evm.TU.Sc2ySwM_117.2240 Anthoceros agrestis HOM05D005363 ORTHO05D006607 5.4e-21 105.9 313 34.8
VMungo1080G1535 Vigna mungo HOM05D005363 ORTHO05D006607 5.1e-19 99.4 113 49.6
SMO347G0170 Selaginella moellendorffii HOM05D005363 ORTHO05D006607 1.3e-17 94.7 86 57.0
arahy.Tifrunner.gnm1.ann1.Q8WXS4 Arachis hypogaea HOM05D005363 ORTHO05D006607 1.1e-16 91.7 93 54.8
Cc06_g05450 Coffea canephora HOM05D005363 ORTHO05D006607 1.6e-12 77.8 223 36.3
CBR_g48040 Chara braunii HOM05D005363 ORTHO05D006607 6.7e-11 72.4 66 56.1
Os08g0177600 Oryza sativa ssp. japonica HOM05D005363 ORTHO05D006607 1.5e-10 71.2 60 58.3
FAN16G0276 Fragaria x ananassa HOM05D005363 ORTHO05D006607 1.9e-10 70.9 306 27.8
Zm00001eb171920 Zea mays HOM05D005363 ORTHO05D006607 1.6e-09 67.8 58 53.4


User provided reference genes

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