Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE11G0646 Ceratophyllum demersum HOM05D001670 ORTHO05D017370 9.2e-193 676.8 359 100.0
Nn6g33938 Nelumbo nucifera HOM05D001670 ORTHO05D002980 1.4e-111 407.1 383 60.8
CDE09G0971 Ceratophyllum demersum HOM05D001670 ORTHO05D002980 6.3e-109 398.3 223 92.8
TAR375G0686 Trochodendron aralioides HOM05D001670 ORTHO05D002980 4.5e-107 392.1 384 59.6
MBI04_g09509_MAGBIO Magnolia biondii HOM05D001670 ORTHO05D002980 5.9e-107 391.7 393 59.3
Aqoxy7G00778 Aquilegia oxysepala HOM05D001670 ORTHO05D002980 5.7e-102 375.2 383 57.4
GSVIVG01018721001 Vitis vinifera HOM05D001670 ORTHO05D002980 1.1e-100 370.9 381 58.3
Rhsim01G0135600 Rhododendron simsii HOM05D001670 ORTHO05D002980 4.1e-100 369.0 367 58.3
CSS0023490 Camellia sinensis var. sinensis HOM05D001670 ORTHO05D002980 1.6e-99 367.1 382 55.5
CSS0045110 Camellia sinensis var. sinensis HOM05D001670 ORTHO05D002980 1.6e-99 367.1 382 55.5
Thecc.01G385600 Theobroma cacao HOM05D001670 ORTHO05D002980 7.8e-99 364.8 368 57.9
Dinv44111 Davidia involucrata HOM05D001670 ORTHO05D002980 6.6e-98 361.7 375 56.0
Cfa011137 Carpinus fangiana HOM05D001670 ORTHO05D002980 1.1e-97 360.9 368 57.1
CiPaw.13G031300 Carya illinoinensis HOM05D001670 ORTHO05D002980 1.9e-97 360.1 368 57.1
Aqoxy6G02523 Aquilegia oxysepala HOM05D001670 ORTHO05D002980 5.6e-97 358.6 380 53.7
CsaV3_3G007410 Cucumis sativus L. HOM05D001670 ORTHO05D002980 5.6e-97 358.6 356 57.6
Gohir.A12G095700 Gossypium hirsutum HOM05D001670 ORTHO05D002980 5.6e-97 358.6 366 57.7
Prupe.2G135900 Prunus persica HOM05D001670 ORTHO05D002980 5.6e-97 358.6 367 57.8
QL04p035871 Quercus lobata HOM05D001670 ORTHO05D002980 7.3e-97 358.2 367 56.9
CiPaw.14G024400 Carya illinoinensis HOM05D001670 ORTHO05D002980 3.6e-96 355.9 371 56.6
Duzib133G0195 Durio zibethinus HOM05D001670 ORTHO05D002980 6.1e-96 355.1 359 57.4
Ciclev10018430m.g Citrus clementina HOM05D001670 ORTHO05D002980 8.0e-96 354.8 368 57.6
Manes.01G270100 Manihot esculenta HOM05D001670 ORTHO05D002980 1.0e-95 354.4 357 57.4
Gorai.008G107100 Gossypium raimondii HOM05D001670 ORTHO05D002980 1.4e-95 354.0 366 56.6
Atru.chr5.219 Acer truncatum HOM05D001670 ORTHO05D002980 3.1e-95 352.8 364 55.8
ClCG05G000260 Citrullus lanatus HOM05D001670 ORTHO05D002980 4.0e-95 352.4 357 56.9
MELO3C005963.2 Cucumis melo HOM05D001670 ORTHO05D002980 8.9e-95 351.3 355 56.9
TAR629G1646 Trochodendron aralioides HOM05D001670 ORTHO05D002980 1.2e-94 350.9 388 54.1
HPP92_007431 Vanilla planifolia HOM05D001670 ORTHO05D002980 1.5e-94 350.5 366 56.0
TAR374G0935 Trochodendron aralioides HOM05D001670 ORTHO05D002980 2.6e-94 349.7 366 57.7
Atru.chr1.760 Acer truncatum HOM05D001670 ORTHO05D002980 4.4e-94 349.0 376 54.5
Dinv06565 Davidia involucrata HOM05D001670 ORTHO05D002980 5.8e-94 348.6 384 55.5
Manes.05G050200 Manihot esculenta HOM05D001670 ORTHO05D002980 7.5e-94 348.2 367 56.7
Os10g0556700 Oryza sativa ssp. japonica HOM05D001670 ORTHO05D002980 1.3e-93 347.4 351 57.5
ATR0317G075 Amborella trichopoda HOM05D001670 ORTHO05D002980 2.2e-93 346.7 376 52.9
Glyma.07G108700 Glycine max HOM05D001670 ORTHO05D002980 3.7e-93 345.9 369 55.6
TWI14G1227 Tripterygium wilfordii HOM05D001670 ORTHO05D002980 4.9e-93 345.5 363 55.4
VMungo0331G0876 Vigna mungo HOM05D001670 ORTHO05D002980 4.9e-93 345.5 371 55.5
Potri.002G143000 Populus trichocarpa HOM05D001670 ORTHO05D002980 6.4e-93 345.1 373 54.7
COL.COLO4_12469 Corchorus olitorius HOM05D001670 ORTHO05D002980 8.3e-93 344.7 347 58.8
PGR042G0136 Punica granatum HOM05D001670 ORTHO05D002980 8.3e-93 344.7 356 56.7
Glyma.03G118400 Glycine max HOM05D001670 ORTHO05D002980 1.4e-92 344.0 369 55.3
Gorai.007G088100 Gossypium raimondii HOM05D001670 ORTHO05D002980 2.4e-92 343.2 366 55.7
Sabra02G0111500 Salix brachista HOM05D001670 ORTHO05D002980 2.4e-92 343.2 379 53.6
Gohir.A11G078000 Gossypium hirsutum HOM05D001670 ORTHO05D002980 3.2e-92 342.8 366 55.7
Gohir.D11G082400 Gossypium hirsutum HOM05D001670 ORTHO05D002980 3.2e-92 342.8 366 55.7
Lj9C563G7 Lonicera japonica HOM05D001670 ORTHO05D002980 3.2e-92 342.8 373 53.9
MD07G1112500 Malus domestica HOM05D001670 ORTHO05D002980 4.1e-92 342.4 348 58.6
Eucgr.E01609 Eucalyptus grandis HOM05D001670 ORTHO05D002980 5.4e-92 342.0 366 55.7
TWI59G0301 Tripterygium wilfordii HOM05D001670 ORTHO05D002980 5.4e-92 342.0 368 54.6
Phvul.010G056800 Phaseolus vulgaris HOM05D001670 ORTHO05D002980 2.0e-91 340.1 366 53.8
Gohir.D12G098300 Gossypium hirsutum HOM05D001670 ORTHO05D002980 6.0e-91 338.6 336 58.9
arahy.Tifrunner.gnm1.ann1.5NE8AH Arachis hypogaea HOM05D001670 ORTHO05D002980 1.0e-90 337.8 368 54.3
Potri.014G058800 Populus trichocarpa HOM05D001670 ORTHO05D002980 1.0e-90 337.8 365 55.3
Cpa.g.sc914.1 Carica papaya HOM05D001670 ORTHO05D002980 1.7e-90 337.0 397 52.4
arahy.Tifrunner.gnm1.ann1.1V1Y36 Arachis hypogaea HOM05D001670 ORTHO05D002980 3.9e-90 335.9 369 54.2
Lsat_1_v5_gn_7_10221 Lactuca sativa HOM05D001670 ORTHO05D002980 6.6e-90 335.1 371 51.8
MD02G1214300 Malus domestica HOM05D001670 ORTHO05D002980 6.6e-90 335.1 365 55.9
CANSAT21G0618 Cannabis sativa HOM05D001670 ORTHO05D002980 1.5e-89 334.0 371 55.3
PSO170G5961 Papaver somniferum HOM05D001670 ORTHO05D002980 1.5e-89 334.0 358 53.6
Lj3g0005567 Lotus japonicus HOM05D001670 ORTHO05D002980 2.5e-89 333.2 356 55.3
Sed0002470 Sechium edule HOM05D001670 ORTHO05D002980 4.3e-89 332.4 355 53.5
FAN10G0390 Fragaria x ananassa HOM05D001670 ORTHO05D002980 5.6e-89 332.0 370 54.3
Cc02_g24610 Coffea canephora HOM05D001670 ORTHO05D002980 7.3e-89 331.6 373 53.1
FAN10G2564 Fragaria x ananassa HOM05D001670 ORTHO05D002980 7.3e-89 331.6 369 53.7
CAN.G899.12 Capsicum annuum HOM05D001670 ORTHO05D002980 9.5e-89 331.3 379 54.1
Migut.B01578 Erythranthe guttata HOM05D001670 ORTHO05D002980 9.5e-89 331.3 373 53.1
MSTRG.20721 Avicennia marina HOM05D001670 ORTHO05D002980 1.2e-88 330.9 372 52.7
PSO017G3667 Papaver somniferum HOM05D001670 ORTHO05D002980 1.2e-88 330.9 369 52.8
RcHm_v2.0_Chr1g0348711 Rosa chinensis HOM05D001670 ORTHO05D002980 1.2e-88 330.9 360 53.9
Zm00001eb000340 Zea mays HOM05D001670 ORTHO05D002980 1.2e-88 330.9 349 56.2
FvH4_7g10770 Fragaria vesca HOM05D001670 ORTHO05D002980 2.1e-88 330.1 368 53.5
FAN06G0311 Fragaria x ananassa HOM05D001670 ORTHO05D002980 2.1e-88 330.1 368 53.5
FAN06G1683 Fragaria x ananassa HOM05D001670 ORTHO05D002980 2.1e-88 330.1 368 53.5
vmacro21039 Vaccinium macrocarpon HOM05D001670 ORTHO05D002980 2.1e-88 330.1 399 51.6
Nitab4.5_0000706g0120 Nicotiana tabacum HOM05D001670 ORTHO05D002980 2.8e-88 329.7 373 54.7
Nitab4.5_0002304g0030 Nicotiana tabacum HOM05D001670 ORTHO05D002980 4.7e-88 328.9 372 53.8
FAN01G0667 Fragaria x ananassa HOM05D001670 ORTHO05D002980 8.0e-88 328.2 363 53.4
GSVIVG01018178001 Vitis vinifera HOM05D001670 ORTHO05D002980 1.4e-87 327.4 363 52.9
Sc13g0006690 Simmondsia chinensis HOM05D001670 ORTHO05D002980 1.8e-87 327.0 357 54.1
FAN03G2300 Fragaria x ananassa HOM05D001670 ORTHO05D002980 4.0e-87 325.9 363 53.2
Lalb_Chr07g0195691 Lupinus albus HOM05D001670 ORTHO05D002980 8.9e-87 324.7 365 52.3
PSO104G0201 Papaver somniferum HOM05D001670 ORTHO05D002980 2.0e-86 323.6 387 52.7
Peaxi162Scf00377g00038 Petunia axillaris HOM05D001670 ORTHO05D002980 4.4e-86 322.4 370 52.4
Oeu064574.1 Olea europaea HOM05D001670 ORTHO05D002980 1.3e-85 320.9 375 52.0
Ca_23116_v3 Cicer arietinum L. HOM05D001670 ORTHO05D002980 1.7e-85 320.5 365 53.4
Oeu000038.3 Olea europaea HOM05D001670 ORTHO05D002980 3.7e-85 319.3 385 50.9
HanXRQChr04g0123421 Helianthus annuus HOM05D001670 ORTHO05D002980 1.4e-84 317.4 372 51.1
PSO421G0693 Papaver somniferum HOM05D001670 ORTHO05D002980 4.1e-84 315.8 376 52.9
Hund27384 Selenicereus undatus HOM05D001670 ORTHO05D002980 7.0e-84 315.1 367 50.7
Zm00001eb404410 Zea mays HOM05D001670 ORTHO05D002980 7.0e-84 315.1 376 50.8
THA.LOC104814077 Tarenaya hassleriana HOM05D001670 ORTHO05D002980 1.2e-83 314.3 364 51.9
Psat4g209400 Pisum sativum HOM05D001670 ORTHO05D002980 1.6e-83 313.9 357 50.7
Solyc01g090780.3 Solanum lycopersicum HOM05D001670 ORTHO05D002980 1.6e-83 313.9 378 51.1
Lalb_Chr13g0290371 Lupinus albus HOM05D001670 ORTHO05D002980 3.5e-83 312.8 354 51.4
Sopen01g036510 Solanum pennellii HOM05D001670 ORTHO05D002980 3.5e-83 312.8 378 51.1
DCAR_025093 Daucus carota HOM05D001670 ORTHO05D002980 1.0e-82 311.2 371 50.4
DCAR_015867 Daucus carota HOM05D001670 ORTHO05D002980 3.0e-82 309.7 355 52.4
Lj7C538G19 Lonicera japonica HOM05D001670 ORTHO05D002980 6.6e-82 308.5 374 50.8
SGA_v2.0_scaffold153G36957 Striga asiatica HOM05D001670 ORTHO05D002980 1.1e-81 307.8 376 50.0
THA.LOC104801485 Tarenaya hassleriana HOM05D001670 ORTHO05D002980 1.1e-81 307.8 367 51.0
ECA236G0609 Erigeron canadensis HOM05D001670 ORTHO05D002980 1.5e-81 307.4 362 51.4
TPR.G28734 Trifolium pratense HOM05D001670 ORTHO05D002980 3.3e-81 306.2 369 51.5
BcaB03g13629 Brassica carinata HOM05D001670 ORTHO05D002980 9.5e-81 304.7 367 48.8
HanXRQChr06g0168951 Helianthus annuus HOM05D001670 ORTHO05D002980 1.2e-80 304.3 371 50.9
SalBow5G2000 Salvia bowleyana HOM05D001670 ORTHO05D002980 1.6e-80 303.9 414 46.1
Oeu061519.1 Olea europaea HOM05D001670 ORTHO05D002980 1.8e-79 300.4 375 50.1
BraA10t42293Z Brassica rapa HOM05D001670 ORTHO05D002980 3.1e-79 299.7 355 48.7
A10p00140 Brassica napus HOM05D001670 ORTHO05D002980 5.2e-79 298.9 355 48.7
AT1G02080 Arabidopsis thaliana HOM05D001670 ORTHO05D002980 6.8e-79 298.5 359 51.3
BcaC08g44594 Brassica carinata HOM05D001670 ORTHO05D002980 6.8e-79 298.5 360 50.6
C05p00130 Brassica napus HOM05D001670 ORTHO05D002980 6.8e-79 298.5 355 48.7
C06p20660 Brassica napus HOM05D001670 ORTHO05D002980 6.8e-79 298.5 360 50.6
BolC5t28803H Brassica oleracea HOM05D001670 ORTHO05D002980 6.8e-79 298.5 355 48.7
BolC6t37249H Brassica oleracea HOM05D001670 ORTHO05D002980 6.8e-79 298.5 360 50.6
CARHR000250 Cardamine hirsuta HOM05D001670 ORTHO05D002980 1.5e-78 297.4 363 49.9
Sp1g00220 Schrenkiella parvula HOM05D001670 ORTHO05D002980 1.5e-78 297.4 366 48.9
AL1G10200 Arabidopsis lyrata HOM05D001670 ORTHO05D002980 2.6e-78 296.6 360 48.9
BcaC07g42342 Brassica carinata HOM05D001670 ORTHO05D002980 3.4e-78 296.2 361 49.9
A07p21180 Brassica napus HOM05D001670 ORTHO05D002980 4.4e-78 295.8 360 49.7
Aa31LG1G11410 Aethionema arabicum HOM05D001670 ORTHO05D002980 7.5e-78 295.0 362 49.4
Carub.0001s0015 Capsella rubella HOM05D001670 ORTHO05D002980 7.5e-78 295.0 348 50.0
Thhalv10006521m.g Eutrema salsugineum HOM05D001670 ORTHO05D002980 1.7e-77 293.9 361 49.9
BcaB02g07859 Brassica carinata HOM05D001670 ORTHO05D002980 2.2e-77 293.5 360 49.4
BcaNung05012 Brassica carinata HOM05D001670 ORTHO05D002980 3.7e-77 292.7 360 49.4
A09p69240 Brassica napus HOM05D001670 ORTHO05D002980 3.7e-77 292.7 360 49.4
BolC8t52916H Brassica oleracea HOM05D001670 ORTHO05D002980 3.7e-77 292.7 360 49.4
BraA09t42277Z Brassica rapa HOM05D001670 ORTHO05D002980 8.3e-77 291.6 360 49.2
EL10Ac1g00822 Beta vulgaris HOM05D001670 ORTHO05D002980 1.4e-76 290.8 363 49.9
BraA07t29805Z Brassica rapa HOM05D001670 ORTHO05D002980 5.4e-76 288.9 382 47.1
Medtr8g005820 Medicago truncatula HOM05D001670 ORTHO05D002980 1.2e-75 287.7 368 49.2
Ah.05g173600 Amaranthus hybridus HOM05D001670 ORTHO05D002980 2.1e-75 287.0 367 49.9
Mapoly0037s0011 Marchantia polymorpha HOM05D001670 ORTHO05D002980 1.0e-74 284.6 420 43.6
SGA_v2.0_scaffold399G50813 Striga asiatica HOM05D001670 ORTHO05D002980 2.5e-73 280.0 447 42.7
Duzib268G0141 Durio zibethinus HOM05D001670 ORTHO05D002980 2.8e-72 276.6 366 49.7
Duzib068G1107 Durio zibethinus HOM05D001670 ORTHO05D002980 6.2e-72 275.4 368 47.8
Actinidia24999 Actinidia chinensis HOM05D001670 ORTHO05D002980 1.1e-71 274.6 366 50.0
Hund17061 Selenicereus undatus HOM05D001670 ORTHO05D002980 5.4e-68 262.3 363 46.0
Thecc.03G154200 Theobroma cacao HOM05D001670 ORTHO05D002980 5.4e-68 262.3 353 46.2
SMO340G0305 Selaginella moellendorffii HOM05D001670 ORTHO05D002980 4.6e-67 259.2 356 44.1
Rhsim03G0166300 Rhododendron simsii HOM05D001670 ORTHO05D002980 7.6e-62 241.9 374 44.1
Lsat_1_v5_gn_5_55541 Lactuca sativa HOM05D000041 ORTHO05D000452 5.6e-57 225.7 177 63.8
Pp3c21_18770 Physcomitrium patens HOM05D001670 ORTHO05D002980 6.2e-56 222.2 415 37.8
SHI13578 Sapria himalayana HOM05D001670 ORTHO05D002980 2.3e-50 203.8 267 50.6
CBR_g37673 Chara braunii HOM05D001670 ORTHO05D002980 1.1e-49 201.4 390 36.7
MCO11G155 Micromonas commoda HOM05D001670 ORTHO05D002980 1.6e-48 197.6 332 37.0
C08p54060 Brassica napus HOM05D001670 ORTHO05D002980 3.7e-48 196.4 160 58.8
Actinidia12669 Actinidia chinensis HOM05D001670 ORTHO05D002980 6.9e-47 192.2 169 63.9
PGSC0003DMG400000162 Solanum tuberosum HOM05D001670 ORTHO05D017370 6.0e-43 179.1 179 51.4
Pp3c5_6540 Physcomitrium patens HOM05D001670 ORTHO05D002980 5.1e-42 176.0 424 31.8
PRCOL_00002164 Prasinoderma coloniale HOM05D001670 ORTHO05D002980 1.3e-37 161.4 331 32.9
MBI18_g42384_MAGBIO Magnolia biondii HOM05D001670 ORTHO05D017370 8.4e-37 158.7 109 76.1
Aqoxy4G01930 Aquilegia oxysepala HOM05D001670 ORTHO05D017370 9.3e-36 155.2 222 47.3
Cre14.g632950 Chlamydomonas reinhardtii HOM05D001670 ORTHO05D002980 5.1e-34 149.4 152 48.0
Lsat_1_v5_gn_4_44320 Lactuca sativa HOM05D001670 ORTHO05D002980 1.9e-28 131.0 292 33.9
PGSC0003DMG402000201 Solanum tuberosum HOM05D001670 ORTHO05D017370 1.4e-26 124.8 152 47.4
CAN.G78.28 Capsicum annuum HOM05D001670 ORTHO05D017370 2.8e-24 117.1 100 57.0
ECA236G0282 Erigeron canadensis HOM05D007737 ORTHO05D009754 3.1e-23 113.6 139 49.6
PGSC0003DMG400000050 Solanum tuberosum HOM05D001670 ORTHO05D017370 4.1e-23 113.2 99 55.6
Lsat_1_v5_gn_4_44300 Lactuca sativa HOM05D001670 ORTHO05D017370 5.3e-23 112.8 116 55.2
Cfa026075 Carpinus fangiana HOM05D001670 ORTHO05D002980 2.3e-18 97.4 139 35.3
Zm00001eb038330 Zea mays HOM05D001670 ORTHO05D002980 4.4e-17 93.2 84 64.3
Zm00001eb131800 Zea mays HOM05D001670 ORTHO05D002980 8.2e-16 89.0 57 77.2
Zm00001eb387200 Zea mays HOM05D001670 ORTHO05D002980 4.1e-15 86.7 57 73.7
Haze_02723 Corylus avellana HOM05D001670 ORTHO05D002980 1.3e-13 81.6 68 57.4
Hma1.2p1_0341F.1_g130250 Hydrangea macrophylla HOM05D001670 ORTHO05D002980 1.5e-12 78.2 86 52.3
BcaNung05287 Brassica carinata HOM05D001670 ORTHO05D002980 1.6e-11 74.7 54 68.5
Pp3c6_26730 Physcomitrium patens HOM05D001670 ORTHO05D002980 2.1e-11 74.3 322 27.6
Lsat_1_v5_gn_9_56940 Lactuca sativa HOM05D001670 ORTHO05D005736 6.1e-11 72.8 48 70.8
SHI13579 Sapria himalayana HOM05D001670 ORTHO05D002980 1.4e-10 71.6 68 45.6
LjContig00408g0006064 Lotus japonicus HOM05D001670 ORTHO05D010670 3.0e-10 70.5 57 59.6
AagrBONN_evm.TU.Sc2ySwM_362.1757 Anthoceros agrestis HOM05D001670 ORTHO05D002980 5.2e-10 69.7 282 26.2
PGSC0003DMG401000201 Solanum tuberosum HOM05D001670 ORTHO05D002980 6.7e-10 69.3 68 48.5
PGSC0003DMG400000049 Solanum tuberosum HOM05D001670 ORTHO05D002980 3.3e-09 67.0 68 47.1
Rhsim04G0099300 Rhododendron simsii HOM05D004426 ORTHO05D005417 1.7e-08 64.7 120 40.8
C09p00060 Brassica napus HOM05D001670 ORTHO05D002980 2.8e-08 63.9 47 61.7
BraA09t35680Z Brassica rapa HOM05D001670 ORTHO05D002980 2.8e-08 63.9 47 61.7
BcaC04g24208 Brassica carinata HOM05D001670 ORTHO05D002980 5.3e-07 59.7 47 55.3
BolC9t52941H Brassica oleracea HOM05D001670 ORTHO05D002980 7.0e-07 59.3 47 53.2
Pp3c21_18750 Physcomitrium patens HOM05D001670 ORTHO05D017370 7.7e-06 55.8 151 31.8


User provided reference genes

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