Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE11G0070 Ceratophyllum demersum HOM05D005564 ORTHO05D006872 1.8e-96 355.9 179 100.0
CDE02G1506 Ceratophyllum demersum HOM05D005564 ORTHO05D006872 3.8e-78 295.0 191 78.0
Gorai.006G046400 Gossypium raimondii HOM05D005564 ORTHO05D006872 2.9e-46 189.1 173 56.6
TAR636G1392 Trochodendron aralioides HOM05D005564 ORTHO05D008130 3.8e-46 188.7 196 54.1
RcHm_v2.0_Chr1g0373311 Rosa chinensis HOM05D005564 ORTHO05D006872 5.5e-45 184.9 199 52.3
Cpa.g.sc13.231 Carica papaya HOM05D005564 ORTHO05D006872 4.6e-44 181.8 204 51.0
Gohir.A13G032000 Gossypium hirsutum HOM05D005564 ORTHO05D006872 2.3e-43 179.5 204 49.0
Gorai.001G052100 Gossypium raimondii HOM05D005564 ORTHO05D006872 2.3e-43 179.5 204 49.5
Duzib084G1177 Durio zibethinus HOM05D005564 ORTHO05D006872 3.0e-43 179.1 209 50.2
Nn6g32633 Nelumbo nucifera HOM05D005564 ORTHO05D006872 5.1e-43 178.3 198 52.5
Gohir.D07G048900 Gossypium hirsutum HOM05D005564 ORTHO05D006872 6.7e-43 177.9 204 49.0
Nn6g33765 Nelumbo nucifera HOM05D005564 ORTHO05D006872 6.7e-43 177.9 198 52.0
FvH4_7g26720 Fragaria vesca HOM05D005564 ORTHO05D006872 2.5e-42 176.0 197 50.8
FAN06G0976 Fragaria x ananassa HOM05D005564 ORTHO05D006872 2.5e-42 176.0 195 49.7
PGR042G2925 Punica granatum HOM05D005564 ORTHO05D006872 2.5e-42 176.0 200 51.0
Sabra15G0133100 Salix brachista HOM05D005564 ORTHO05D006872 2.5e-42 176.0 203 51.7
FAN03G1301 Fragaria x ananassa HOM05D005564 ORTHO05D006872 3.3e-42 175.6 197 50.8
Gorai.007G289400 Gossypium raimondii HOM05D005564 ORTHO05D006872 3.3e-42 175.6 203 48.8
FAN10G0633 Fragaria x ananassa HOM05D005564 ORTHO05D006872 9.7e-42 174.1 197 50.3
PSO063G5398 Papaver somniferum HOM05D005564 ORTHO05D006872 1.3e-41 173.7 205 45.4
GSVIVG01024470001 Vitis vinifera HOM05D005564 ORTHO05D006872 1.3e-41 173.7 118 67.8
Dinv34536 Davidia involucrata HOM05D005564 ORTHO05D006872 2.2e-41 172.9 199 50.3
Prupe.2G270700 Prunus persica HOM05D005564 ORTHO05D006872 3.7e-41 172.2 198 50.0
SalBow3G4594 Salvia bowleyana HOM05D005564 ORTHO05D006872 3.7e-41 172.2 197 48.7
THA.LOC104825050 Tarenaya hassleriana HOM05D005564 ORTHO05D006872 4.8e-41 171.8 203 48.3
Manes.06G130000 Manihot esculenta HOM05D005564 ORTHO05D006872 6.3e-41 171.4 204 46.6
Oeu030874.1 Olea europaea HOM05D005564 ORTHO05D006872 6.3e-41 171.4 203 48.8
QL09p027441 Quercus lobata HOM05D005564 ORTHO05D006872 1.1e-40 170.6 201 49.8
Gorai.005G129900 Gossypium raimondii HOM05D005564 ORTHO05D006872 2.4e-40 169.5 204 48.0
TAR629G2772 Trochodendron aralioides HOM05D005564 ORTHO05D006872 2.4e-40 169.5 205 49.3
Migut.F00541 Erythranthe guttata HOM05D005564 ORTHO05D006872 4.1e-40 168.7 200 49.5
arahy.Tifrunner.gnm1.ann1.2T0BFY Arachis hypogaea HOM05D005564 ORTHO05D006872 5.3e-40 168.3 196 48.5
Cfa013601 Carpinus fangiana HOM05D005564 ORTHO05D006872 5.3e-40 168.3 198 50.5
HanXRQChr08g0221891 Helianthus annuus HOM05D005564 ORTHO05D006872 5.3e-40 168.3 198 49.5
Phvul.005G030000 Phaseolus vulgaris HOM05D005564 ORTHO05D006872 5.3e-40 168.3 193 50.3
Potri.015G111628 Populus trichocarpa HOM05D005564 ORTHO05D006872 9.1e-40 167.5 203 51.2
Thecc.03G145600 Theobroma cacao HOM05D005564 ORTHO05D006872 9.1e-40 167.5 203 47.3
AT5G51170 Arabidopsis thaliana HOM05D005564 ORTHO05D006872 1.2e-39 167.2 200 48.5
MSTRG.27230 Avicennia marina HOM05D005564 ORTHO05D006872 1.2e-39 167.2 202 48.0
Haze_22223 Corylus avellana HOM05D005564 ORTHO05D006872 1.2e-39 167.2 199 49.7
TPR.G39148 Trifolium pratense HOM05D005564 ORTHO05D006872 1.5e-39 166.8 216 46.8
CANSAT56G0249 Cannabis sativa HOM05D005564 ORTHO05D006872 2.0e-39 166.4 201 47.3
Ca_27086_v3 Cicer arietinum L. HOM05D005564 ORTHO05D006872 2.0e-39 166.4 197 50.3
MELO3C005454.2 Cucumis melo HOM05D005564 ORTHO05D006872 2.0e-39 166.4 204 46.6
VMungo1383G3643 Vigna mungo HOM05D005564 ORTHO05D006872 2.0e-39 166.4 193 50.8
AUR62025416 Chenopodium quinoa HOM05D005564 ORTHO05D006872 2.6e-39 166.0 120 65.8
COL.COLO4_37310 Corchorus olitorius HOM05D005564 ORTHO05D006872 2.6e-39 166.0 203 45.8
BraSC35t46004Z Brassica rapa HOM05D005564 ORTHO05D006872 3.4e-39 165.6 205 46.8
CsaV3_5G005020 Cucumis sativus L. HOM05D005564 ORTHO05D006872 3.4e-39 165.6 204 47.1
Glyma.01G079300 Glycine max HOM05D005564 ORTHO05D006872 4.5e-39 165.2 193 48.7
SGA_v2.0_scaffold60G20845 Striga asiatica HOM05D005564 ORTHO05D006872 4.5e-39 165.2 201 47.3
Lj1g0017373 Lotus japonicus HOM05D005564 ORTHO05D006872 5.9e-39 164.9 197 48.7
Atru.chr6.1979 Acer truncatum HOM05D005564 ORTHO05D006872 7.7e-39 164.5 118 66.1
Atru.chr6.2007 Acer truncatum HOM05D005564 ORTHO05D006872 7.7e-39 164.5 118 66.1
ATR0188G007 Amborella trichopoda HOM05D005564 ORTHO05D006872 7.7e-39 164.5 118 64.4
A10p07960 Brassica napus HOM05D005564 ORTHO05D006872 7.7e-39 164.5 205 46.3
CiPaw.07G183300 Carya illinoinensis HOM05D005564 ORTHO05D006872 7.7e-39 164.5 118 66.1
Sp6g13380 Schrenkiella parvula HOM05D005564 ORTHO05D006872 7.7e-39 164.5 205 48.3
Ciclev10032148m.g Citrus clementina HOM05D005564 ORTHO05D006872 1.0e-38 164.1 118 66.1
Medtr0053s0020 Medicago truncatula HOM05D005564 ORTHO05D006872 1.0e-38 164.1 215 44.7
Gorai.013G121700 Gossypium raimondii HOM05D005564 ORTHO05D006872 1.3e-38 163.7 195 48.2
Hma1.2p1_1014F.1_g247960 Hydrangea macrophylla HOM05D005564 ORTHO05D006872 1.3e-38 163.7 201 46.8
Hma1.2p1_1305F.1_g274526 Hydrangea macrophylla HOM05D005564 ORTHO05D006872 1.3e-38 163.7 201 46.8
HanXRQChr08g0223121 Helianthus annuus HOM05D005564 ORTHO05D006872 1.7e-38 163.3 196 50.5
ECA233G5472 Erigeron canadensis HOM05D005564 ORTHO05D006872 2.9e-38 162.5 197 50.8
Medtr0092s0090 Medicago truncatula HOM05D005564 ORTHO05D006872 2.9e-38 162.5 214 45.3
C09p39850 Brassica napus HOM05D005564 ORTHO05D006872 3.8e-38 162.2 205 46.3
MD07G1241800 Malus domestica HOM05D005564 ORTHO05D006872 3.8e-38 162.2 202 47.0
Aa31LG3G7670 Aethionema arabicum HOM05D005564 ORTHO05D006872 5.0e-38 161.8 208 45.2
AUR62008825 Chenopodium quinoa HOM05D005564 ORTHO05D006872 5.0e-38 161.8 117 67.5
Thhalv10014247m.g Eutrema salsugineum HOM05D005564 ORTHO05D006872 5.0e-38 161.8 209 45.9
Gohir.A07G044400 Gossypium hirsutum HOM05D005564 ORTHO05D006872 5.0e-38 161.8 117 65.0
Phvul.008G143300 Phaseolus vulgaris HOM05D005564 ORTHO05D006872 5.0e-38 161.8 196 49.0
AL8G25430 Arabidopsis lyrata HOM05D005564 ORTHO05D006872 8.5e-38 161.0 206 47.1
BcaC04g20726 Brassica carinata HOM05D005564 ORTHO05D006872 8.5e-38 161.0 205 45.9
BolC9t56884H Brassica oleracea HOM05D005564 ORTHO05D006872 8.5e-38 161.0 205 45.9
Lj8A49G34 Lonicera japonica HOM05D005564 ORTHO05D006872 8.5e-38 161.0 118 68.6
Nitab4.5_0000103g0380 Nicotiana tabacum HOM05D005564 ORTHO05D006872 1.4e-37 160.2 128 61.7
BcaB08g35471 Brassica carinata HOM05D005564 ORTHO05D006872 1.9e-37 159.8 205 45.9
Hund18321 Selenicereus undatus HOM05D005564 ORTHO05D006872 1.9e-37 159.8 202 47.5
ClCG09G010750 Citrullus lanatus HOM05D005564 ORTHO05D006872 2.5e-37 159.5 213 44.1
Lalb_Chr19g0127411 Lupinus albus HOM05D005564 ORTHO05D006872 2.5e-37 159.5 196 48.5
EL10Ac7g17720 Beta vulgaris HOM05D005564 ORTHO05D006872 3.2e-37 159.1 115 65.2
CARHR256880 Cardamine hirsuta HOM05D005564 ORTHO05D006872 3.2e-37 159.1 208 47.6
CSS0008072 Camellia sinensis var. sinensis HOM05D005564 ORTHO05D006872 5.5e-37 158.3 201 49.8
ClCG01G004820 Citrullus lanatus HOM05D005564 ORTHO05D006872 5.5e-37 158.3 209 46.4
Gohir.D02G135666 Gossypium hirsutum HOM05D005564 ORTHO05D006872 5.5e-37 158.3 104 69.2
Carub.0008s1121 Capsella rubella HOM05D005564 ORTHO05D006872 7.2e-37 157.9 212 47.6
VMungo1080G0069 Vigna mungo HOM05D005564 ORTHO05D006872 7.2e-37 157.9 110 66.4
Cc00_g13030 Coffea canephora HOM05D005564 ORTHO05D006872 1.2e-36 157.1 118 64.4
TWI39G1038 Tripterygium wilfordii HOM05D005564 ORTHO05D006872 1.2e-36 157.1 203 46.3
vmacro19959 Vaccinium macrocarpon HOM05D005564 ORTHO05D006872 1.2e-36 157.1 197 45.7
CAN.G309.23 Capsicum annuum HOM05D005564 ORTHO05D006872 1.6e-36 156.8 118 63.6
MD07G1244900 Malus domestica HOM05D005564 ORTHO05D006872 1.6e-36 156.8 118 63.6
Sc19g0002740 Simmondsia chinensis HOM05D005564 ORTHO05D006872 2.1e-36 156.4 118 62.7
Eucgr.A02932 Eucalyptus grandis HOM05D005564 ORTHO05D006872 2.7e-36 156.0 118 63.6
Ah.08g213710 Amaranthus hybridus HOM05D005564 ORTHO05D006872 3.6e-36 155.6 204 45.1
MD07G1243700 Malus domestica HOM05D005564 ORTHO05D006872 6.1e-36 154.8 159 52.2
PGSC0003DMG400008328 Solanum tuberosum HOM05D005564 ORTHO05D006872 6.1e-36 154.8 118 62.7
Sed0010204 Sechium edule HOM05D005564 ORTHO05D006872 7.9e-36 154.5 118 61.9
Nitab4.5_0003973g0040 Nicotiana tabacum HOM05D005564 ORTHO05D006872 1.4e-35 153.7 204 45.1
PSO017G2767 Papaver somniferum HOM05D005564 ORTHO05D006872 1.4e-35 153.7 118 58.5
Sopen03g024760 Solanum pennellii HOM05D005564 ORTHO05D006872 1.8e-35 153.3 118 62.7
CSS0031726 Camellia sinensis var. sinensis HOM05D005564 ORTHO05D006872 2.3e-35 152.9 118 62.7
Peaxi162Scf00073g01727 Petunia axillaris HOM05D005564 ORTHO05D006872 2.3e-35 152.9 179 49.2
PSO782G4004 Papaver somniferum HOM05D005564 ORTHO05D006872 3.9e-35 152.1 205 43.9
Zm00001eb249040 Zea mays HOM05D005564 ORTHO05D006872 3.9e-35 152.1 195 44.1
Solyc03g093880.3 Solanum lycopersicum HOM05D005564 ORTHO05D006872 1.1e-34 150.6 118 61.9
DCAR_020165 Daucus carota HOM05D005564 ORTHO05D006872 4.4e-34 148.7 202 46.0
MD01G1175500 Malus domestica HOM05D005564 ORTHO05D006872 4.4e-34 148.7 118 60.2
unitig_21.g20780 Utricularia gibba HOM05D005564 ORTHO05D006872 1.4e-32 143.7 196 43.4
MD07G1245400 Malus domestica HOM05D005564 ORTHO05D006872 1.7e-30 136.7 118 60.2
Os02g0651000 Oryza sativa ssp. japonica HOM05D005564 ORTHO05D006872 3.8e-30 135.6 103 60.2
SHI14145 Sapria himalayana HOM05D005564 ORTHO05D000001 2.1e-28 129.8 198 41.4
SEGI_35477 Sequoiadendron giganteum HOM05D005564 ORTHO05D006872 8.0e-28 127.9 202 40.1
Rhsim03G0157100 Rhododendron simsii HOM05D005564 ORTHO05D006872 1.1e-26 124.0 94 63.8
Pp3c13_1340 Physcomitrium patens HOM05D005564 ORTHO05D006872 6.3e-25 118.2 119 47.9
SMO145G0164 Selaginella moellendorffii HOM05D005564 ORTHO05D006872 5.9e-23 111.7 122 45.1
AagrBONN_evm.TU.Sc2ySwM_228.2399 Anthoceros agrestis HOM05D005564 ORTHO05D006872 1.7e-22 110.2 119 47.1
MD07G1243300 Malus domestica HOM05D005564 ORTHO05D006872 1.1e-21 107.5 86 61.6
Hma1.2p1_1014F.1_g247920 Hydrangea macrophylla HOM05D005564 ORTHO05D006872 5.5e-21 105.1 107 47.7
FAN01G2799 Fragaria x ananassa HOM05D005564 ORTHO05D006872 6.8e-19 98.2 118 44.1
Prupe.4G133000 Prunus persica HOM05D005564 ORTHO05D006872 6.8e-19 98.2 133 46.6
Psat3g164240 Pisum sativum HOM05D005564 ORTHO05D006872 2.0e-18 96.7 155 39.4
CANSAT78G0945 Cannabis sativa HOM05D005564 ORTHO05D006872 3.1e-16 89.4 130 43.1
Rhsim03G0158000 Rhododendron simsii HOM05D005564 ORTHO05D006872 1.7e-14 83.6 156 35.3
Psat3g166160 Pisum sativum HOM05D005564 ORTHO05D006872 1.6e-12 77.0 178 31.5
arahy.Tifrunner.gnm1.ann1.R6MN5Z Arachis hypogaea HOM05D005564 ORTHO05D006872 2.7e-12 76.3 195 30.8
Mapoly0036s0004 Marchantia polymorpha HOM05D005564 ORTHO05D006872 6.1e-12 75.1 168 31.0
Aqoxy3G02663 Aquilegia oxysepala HOM05D005564 ORTHO05D006872 8.0e-12 74.7 44 75.0
CBR_g31024 Chara braunii HOM05D005564 ORTHO05D006872 5.2e-11 72.0 78 41.0
Gohir.D02G130966 Gossypium hirsutum HOM05D005564 ORTHO05D006872 3.1e-08 62.8 129 34.9
Dinv34539 Davidia involucrata HOM05D005564 ORTHO05D006872 4.5e-07 58.9 169 34.3


User provided reference genes

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