Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE07G0852 Ceratophyllum demersum HOM05D004387 ORTHO05D005218 3.0e-47 191.4 92 100.0
CDE04G2438 Ceratophyllum demersum HOM05D004387 ORTHO05D005218 2.9e-18 95.1 58 84.5
ATR0626G351 Amborella trichopoda HOM05D004387 ORTHO05D005218 7.8e-11 70.5 46 69.6
Lj6g0019382 Lotus japonicus HOM05D004387 ORTHO05D005218 1.3e-10 69.7 56 57.1
Actinidia17236 Actinidia chinensis HOM05D004387 ORTHO05D005218 2.3e-10 68.9 56 58.9
PGR142G2016 Punica granatum HOM05D004387 ORTHO05D005218 2.3e-10 68.9 51 64.7
PSO170G6628 Papaver somniferum HOM05D004387 ORTHO05D005218 2.9e-10 68.6 57 57.9
Ca_03365_v3 Cicer arietinum L. HOM05D004387 ORTHO05D005218 5.0e-10 67.8 49 61.2
Lalb_Chr01g0017301 Lupinus albus HOM05D004387 ORTHO05D005218 6.6e-10 67.4 56 55.4
Potri.016G055600 Populus trichocarpa HOM05D004387 ORTHO05D005218 6.6e-10 67.4 51 60.8
Duzib093G1767 Durio zibethinus HOM05D004387 ORTHO05D005218 8.6e-10 67.0 52 61.5
vmacro09074 Vaccinium macrocarpon HOM05D004387 ORTHO05D005218 8.6e-10 67.0 59 55.9
VMungo0331G1303 Vigna mungo HOM05D004387 ORTHO05D005218 8.6e-10 67.0 56 55.4
Aqoxy5G00267 Aquilegia oxysepala HOM05D004387 ORTHO05D005218 1.1e-09 66.6 56 55.4
Psat6g037480 Pisum sativum HOM05D004387 ORTHO05D005218 1.1e-09 66.6 56 53.6
Sabra06G0035900 Salix brachista HOM05D004387 ORTHO05D005218 1.1e-09 66.6 53 58.5
TWI74G1664 Tripterygium wilfordii HOM05D004387 ORTHO05D005218 1.1e-09 66.6 53 58.5
MBI11_g09466_MAGBIO Magnolia biondii HOM05D004387 ORTHO05D005218 1.5e-09 66.2 52 65.4
PSO357G0544 Papaver somniferum HOM05D004387 ORTHO05D005218 1.5e-09 66.2 57 57.9
Phvul.011G181200 Phaseolus vulgaris HOM05D004387 ORTHO05D005218 1.5e-09 66.2 55 56.4
COL.COLO4_28283 Corchorus olitorius HOM05D004387 ORTHO05D005218 1.9e-09 65.9 52 59.6
Dinv39602 Davidia involucrata HOM05D004387 ORTHO05D005218 1.9e-09 65.9 59 55.9
Rhsim09G0155500 Rhododendron simsii HOM05D004387 ORTHO05D005218 1.9e-09 65.9 53 58.5
Thecc.05G153400 Theobroma cacao HOM05D004387 ORTHO05D005218 1.9e-09 65.9 52 59.6
Ciclev10005512m.g Citrus clementina HOM05D004387 ORTHO05D005218 2.5e-09 65.5 55 52.7
Haze_01634 Corylus avellana HOM05D004387 ORTHO05D005218 2.5e-09 65.5 48 60.4
DCAR_013603 Daucus carota HOM05D004387 ORTHO05D005218 2.5e-09 65.5 55 56.4
Glyma.14G145600 Glycine max HOM05D004387 ORTHO05D005218 2.5e-09 65.5 57 50.9
Lsat_1_v5_gn_5_161440 Lactuca sativa HOM05D004387 ORTHO05D005218 2.5e-09 65.5 51 62.7
Atru.chr1.1097 Acer truncatum HOM05D004387 ORTHO05D005218 3.3e-09 65.1 55 52.7
Dinv12482 Davidia involucrata HOM05D004387 ORTHO05D005218 3.3e-09 65.1 59 54.2
Glyma.08G246800 Glycine max HOM05D004387 ORTHO05D005218 3.3e-09 65.1 56 51.8
Lju124A41T49 Lonicera japonica HOM05D004387 ORTHO05D005218 3.3e-09 65.1 59 57.6
Manes.08G050500 Manihot esculenta HOM05D004387 ORTHO05D005218 3.3e-09 65.1 51 58.8
Hund05284 Selenicereus undatus HOM05D004387 ORTHO05D005218 3.3e-09 65.1 60 53.3
TPR.G24500 Trifolium pratense HOM05D004387 ORTHO05D005218 3.3e-09 65.1 56 51.8
TWI77G0383 Tripterygium wilfordii HOM05D004387 ORTHO05D005218 3.3e-09 65.1 52 57.7
Aa31LG2G10160 Aethionema arabicum HOM05D004387 ORTHO05D005218 4.3e-09 64.7 54 57.4
AUR62024448 Chenopodium quinoa HOM05D004387 ORTHO05D005218 4.3e-09 64.7 60 51.7
AUR62026038 Chenopodium quinoa HOM05D004387 ORTHO05D005218 4.3e-09 64.7 60 51.7
Lalb_Chr20g0110501 Lupinus albus HOM05D004387 ORTHO05D005218 4.3e-09 64.7 56 51.8
Nn2g15223 Nelumbo nucifera HOM05D004387 ORTHO05D005218 4.3e-09 64.7 53 62.3
Oeu017945.1 Olea europaea HOM05D004387 ORTHO05D005218 4.3e-09 64.7 57 52.6
Sed0012804 Sechium edule HOM05D004387 ORTHO05D005218 4.3e-09 64.7 57 50.9
Potri.006G051200 Populus trichocarpa HOM05D004387 ORTHO05D005218 5.6e-09 64.3 51 58.8
EL10Ac3g07090 Beta vulgaris HOM05D004387 ORTHO05D005218 7.3e-09 63.9 57 50.9
CsaV3_4G011700 Cucumis sativus L. HOM05D004387 ORTHO05D005218 7.3e-09 63.9 52 53.8
Peaxi162Scf00354g00222 Petunia axillaris HOM05D004387 ORTHO05D005218 7.3e-09 63.9 53 58.5
Sp2g04520 Schrenkiella parvula HOM05D004387 ORTHO05D005218 7.3e-09 63.9 54 57.4
SGA_v2.0_scaffold94G28486 Striga asiatica HOM05D004387 ORTHO05D005218 7.3e-09 63.9 57 54.4
Actinidia38546 Actinidia chinensis HOM05D004387 ORTHO05D005218 9.5e-09 63.5 57 54.4
CiPaw.09G038200 Carya illinoinensis HOM05D004387 ORTHO05D005218 9.5e-09 63.5 51 56.9
MELO3C023136.2 Cucumis melo HOM05D004387 ORTHO05D005218 9.5e-09 63.5 52 53.8
Migut.K00090 Erythranthe guttata HOM05D004387 ORTHO05D005218 9.5e-09 63.5 57 54.4
Gohir.A02G158900 Gossypium hirsutum HOM05D004387 ORTHO05D005218 9.5e-09 63.5 60 55.0
Gohir.D01G090600 Gossypium hirsutum HOM05D004387 ORTHO05D005218 9.5e-09 63.5 52 57.7
Gorai.002G116000 Gossypium raimondii HOM05D004387 ORTHO05D005218 9.5e-09 63.5 52 57.7
TAR633G2397 Trochodendron aralioides HOM05D004387 ORTHO05D005218 9.5e-09 63.5 56 53.6
Cfa006454 Carpinus fangiana HOM05D004387 ORTHO05D005218 1.2e-08 63.2 51 56.9
ClCG04G000130 Citrullus lanatus HOM05D004387 ORTHO05D005218 1.2e-08 63.2 52 53.8
Haze_19856 Corylus avellana HOM05D004387 ORTHO05D005218 1.2e-08 63.2 51 56.9
ECA248G3203 Erigeron canadensis HOM05D004387 ORTHO05D005218 1.2e-08 63.2 51 60.8
Medtr1g007060 Medicago truncatula HOM05D004387 ORTHO05D005218 1.2e-08 63.2 56 51.8
SGA_v2.0_scaffold273G46436 Striga asiatica HOM05D004387 ORTHO05D005218 1.2e-08 63.2 52 57.7
Ah.13g076470 Amaranthus hybridus HOM05D004387 ORTHO05D005218 1.6e-08 62.8 60 50.0
BcaC04g22217 Brassica carinata HOM05D004387 ORTHO05D005218 2.1e-08 62.4 54 55.6
CSS0003189 Camellia sinensis var. sinensis HOM05D004387 ORTHO05D005218 2.1e-08 62.4 55 52.7
CARHR052860 Cardamine hirsuta HOM05D004387 ORTHO05D005218 2.1e-08 62.4 55 52.7
Gohir.D01G090350 Gossypium hirsutum HOM05D004387 ORTHO05D005218 2.1e-08 62.4 56 51.8
Gohir.D01G090850 Gossypium hirsutum HOM05D004387 ORTHO05D005218 2.1e-08 62.4 56 51.8
Nitab4.5_0005483g0010 Nicotiana tabacum HOM05D004387 ORTHO05D005218 2.1e-08 62.4 53 58.5
A09p17690 Brassica napus HOM05D004387 ORTHO05D005218 2.8e-08 62.0 54 55.6
BraA09t37397Z Brassica rapa HOM05D004387 ORTHO05D005218 2.8e-08 62.0 54 55.6
Gohir.A01G009000 Gossypium hirsutum HOM05D004387 ORTHO05D005218 2.8e-08 62.0 52 55.8
Pp3c19_14820 Physcomitrium patens HOM05D004387 ORTHO05D005218 2.8e-08 62.0 57 50.9
MSTRG.10813 Avicennia marina HOM05D004387 ORTHO05D005218 3.6e-08 61.6 56 50.0
Eucgr.A00265 Eucalyptus grandis HOM05D004387 ORTHO05D005218 3.6e-08 61.6 53 58.5
Sopen10g030740 Solanum pennellii HOM05D004387 ORTHO05D005218 3.6e-08 61.6 53 56.6
arahy.Tifrunner.gnm1.ann1.02RJAW Arachis hypogaea HOM05D004387 ORTHO05D005218 4.7e-08 61.2 54 48.1
arahy.Tifrunner.gnm1.ann1.QD816I Arachis hypogaea HOM05D004387 ORTHO05D005218 4.7e-08 61.2 54 48.1
BcaB07g31201 Brassica carinata HOM05D004387 ORTHO05D005218 4.7e-08 61.2 54 53.7
Eucgr.A00267 Eucalyptus grandis HOM05D004387 ORTHO05D005218 4.7e-08 61.2 53 58.5
Thhalv10023611m.g Eutrema salsugineum HOM05D004387 ORTHO05D005218 4.7e-08 61.2 54 53.7
Gorai.002G010400 Gossypium raimondii HOM05D004387 ORTHO05D005218 4.7e-08 61.2 43 65.1
Nitab4.5_0004587g0010 Nicotiana tabacum HOM05D004387 ORTHO05D005218 4.7e-08 61.2 53 56.6
AL2G16570 Arabidopsis lyrata HOM05D004387 ORTHO05D005218 6.1e-08 60.8 54 53.7
BNapus_Darmor_BZH_scaffold_155p00060 Brassica napus HOM05D004387 ORTHO05D005218 6.1e-08 60.8 54 53.7
C09p22030 Brassica napus HOM05D004387 ORTHO05D005218 6.1e-08 60.8 54 53.7
BolC9t55109H Brassica oleracea HOM05D004387 ORTHO05D005218 6.1e-08 60.8 54 53.7
Nitab4.5_0009442g0010 Nicotiana tabacum HOM05D004387 ORTHO05D005218 6.1e-08 60.8 53 56.6
QL02p103266 Quercus lobata HOM05D004387 ORTHO05D005218 6.1e-08 60.8 51 52.9
Cc07_g20870 Coffea canephora HOM05D004387 ORTHO05D005218 8.0e-08 60.5 59 47.5
HPP92_019752 Vanilla planifolia HOM05D004387 ORTHO05D005218 8.0e-08 60.5 44 61.4
AT1G60080 Arabidopsis thaliana HOM05D004387 ORTHO05D005218 1.0e-07 60.1 52 55.8
CANSAT21G1698 Cannabis sativa HOM05D004387 ORTHO05D005218 1.0e-07 60.1 56 48.2
Cc06_g17120 Coffea canephora HOM05D004387 ORTHO05D005218 1.0e-07 60.1 59 47.5
Eucgr.A00063 Eucalyptus grandis HOM05D004387 ORTHO05D005218 1.0e-07 60.1 45 62.2
HanXRQChr01g0008751 Helianthus annuus HOM05D004387 ORTHO05D005218 1.0e-07 60.1 46 63.0
Solyc06g075390.4 Solanum lycopersicum HOM05D004387 ORTHO05D005218 1.0e-07 60.1 53 54.7
Sopen06g031800 Solanum pennellii HOM05D004387 ORTHO05D005218 1.0e-07 60.1 53 54.7
PGSC0003DMG400007507 Solanum tuberosum HOM05D004387 ORTHO05D005218 1.0e-07 60.1 53 54.7
THA.LOC104823663 Tarenaya hassleriana HOM05D004387 ORTHO05D005218 1.0e-07 60.1 43 62.8
CSS0001525 Camellia sinensis var. sinensis HOM05D004387 ORTHO05D005218 1.4e-07 59.7 45 62.2
CAN.G128.9 Capsicum annuum HOM05D004387 ORTHO05D005218 1.4e-07 59.7 51 56.9
Cfa016818 Carpinus fangiana HOM05D004387 ORTHO05D005218 1.4e-07 59.7 51 54.9
HanXRQChr06g0178491 Helianthus annuus HOM05D004387 ORTHO05D005218 1.4e-07 59.7 40 70.0
Sc13g0001750 Simmondsia chinensis HOM05D004387 ORTHO05D005218 1.4e-07 59.7 57 49.1
Aqoxy2G02875 Aquilegia oxysepala HOM05D004387 ORTHO05D005218 1.8e-07 59.3 54 53.7
unitig_46.g18442 Utricularia gibba HOM05D004387 ORTHO05D005218 1.8e-07 59.3 50 52.0
Carub.0002s0514 Capsella rubella HOM05D004387 ORTHO05D005218 2.3e-07 58.9 54 53.7
Eucgr.A00059 Eucalyptus grandis HOM05D004387 ORTHO05D005218 2.3e-07 58.9 53 56.6
GSVIVG01033276001 Vitis vinifera HOM05D004387 ORTHO05D005218 2.3e-07 58.9 58 48.3
SEGI_29832 Sequoiadendron giganteum HOM05D004387 ORTHO05D005218 3.0e-07 58.5 53 54.7
Zm00001eb036840 Zea mays HOM05D004387 ORTHO05D005218 1.2e-06 56.6 46 60.9
CSS0024704 Camellia sinensis var. sinensis HOM05D004387 ORTHO05D005218 2.0e-06 55.8 45 57.8
Zm00001eb161840 Zea mays HOM05D004387 ORTHO05D005218 2.0e-06 55.8 51 58.8
CAN.G1001.5 Capsicum annuum HOM05D004387 ORTHO05D005218 2.6e-06 55.5 53 50.9
Mapoly0071s0030 Marchantia polymorpha HOM05D004387 ORTHO05D005218 2.6e-06 55.5 46 52.2
Zm00001eb317600 Zea mays HOM05D004387 ORTHO05D005218 3.4e-06 55.1 46 56.5
CSS0027602 Camellia sinensis var. sinensis HOM05D004387 ORTHO05D005218 9.8e-06 53.5 55 50.9
Prupe.7G061000 Prunus persica HOM05D004387 ORTHO05D005218 9.8e-06 53.5 51 49.0
Zm00001eb175450 Zea mays HOM05D004387 ORTHO05D005218 9.8e-06 53.5 46 58.7


User provided reference genes

Program Settings