Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE06G2275 Ceratophyllum demersum HOM05D004777 ORTHO05D006240 1.8e-126 456.1 248 100.0
CDE02G3984 Ceratophyllum demersum HOM05D004777 ORTHO05D006240 1.5e-88 330.1 189 94.2
TAR622G1080 Trochodendron aralioides HOM05D004777 ORTHO05D006240 6.0e-58 228.4 184 64.1
Thecc.04G008400 Theobroma cacao HOM05D004777 ORTHO05D006240 5.6e-56 221.9 200 59.5
QL02p076729 Quercus lobata HOM05D004777 ORTHO05D006240 9.6e-56 221.1 182 64.3
CiPaw.03G037400 Carya illinoinensis HOM05D004777 ORTHO05D006240 1.6e-55 220.3 188 63.8
Manes.15G183100 Manihot esculenta HOM05D004777 ORTHO05D006240 2.8e-55 219.5 215 57.7
GSVIVG01032488001 Vitis vinifera HOM05D004777 ORTHO05D006240 6.2e-55 218.4 189 61.4
Os08g0382400 Oryza sativa ssp. japonica HOM05D004777 ORTHO05D006240 8.1e-55 218.0 157 69.4
Cpa.g.sc186.15 Carica papaya HOM05D004777 ORTHO05D006240 1.1e-54 217.6 193 59.6
Gohir.D07G226300 Gossypium hirsutum HOM05D004777 ORTHO05D006240 1.4e-54 217.2 201 59.2
Gorai.001G261200 Gossypium raimondii HOM05D004777 ORTHO05D006240 1.8e-54 216.9 201 59.2
Gohir.A07G219400 Gossypium hirsutum HOM05D004777 ORTHO05D006240 4.0e-54 215.7 186 60.8
CANSAT64G2847 Cannabis sativa HOM05D004777 ORTHO05D006240 5.3e-54 215.3 190 60.0
Dinv33499 Davidia involucrata HOM05D004777 ORTHO05D006240 5.3e-54 215.3 178 64.6
CSS0014422 Camellia sinensis var. sinensis HOM05D004777 ORTHO05D006240 9.0e-54 214.5 188 63.3
CSS0014615 Camellia sinensis var. sinensis HOM05D004777 ORTHO05D006240 9.0e-54 214.5 188 63.3
Prupe.3G283500 Prunus persica HOM05D004777 ORTHO05D006240 9.0e-54 214.5 203 57.6
arahy.Tifrunner.gnm1.ann1.8Y3CFZ Arachis hypogaea HOM05D004777 ORTHO05D006240 1.5e-53 213.8 215 55.8
arahy.Tifrunner.gnm1.ann1.8ZV6UW Arachis hypogaea HOM05D004777 ORTHO05D006240 1.5e-53 213.8 215 55.8
TWI56G1110 Tripterygium wilfordii HOM05D004777 ORTHO05D006240 1.5e-53 213.8 179 61.5
HPP92_019954 Vanilla planifolia HOM05D004777 ORTHO05D006240 1.5e-53 213.8 183 60.7
Duzib147G0776 Durio zibethinus HOM05D004777 ORTHO05D006240 2.0e-53 213.4 179 63.7
Duzib187G0683 Durio zibethinus HOM05D004777 ORTHO05D006240 2.0e-53 213.4 186 59.7
MBI10_g11072_MAGBIO Magnolia biondii HOM05D004777 ORTHO05D006240 2.0e-53 213.4 166 68.1
Potri.001G351400 Populus trichocarpa HOM05D004777 ORTHO05D006240 2.0e-53 213.4 191 60.2
MD09G1035000 Malus domestica HOM05D004777 ORTHO05D006240 2.6e-53 213.0 166 66.3
Potri.017G072800 Populus trichocarpa HOM05D004777 ORTHO05D006240 2.6e-53 213.0 191 59.7
CsaV3_3G042370 Cucumis sativus L. HOM05D004777 ORTHO05D006240 3.4e-53 212.6 163 69.9
Sabra17G0060200 Salix brachista HOM05D004777 ORTHO05D006240 3.4e-53 212.6 191 60.7
Haze_14664 Corylus avellana HOM05D004777 ORTHO05D006240 4.4e-53 212.2 228 52.6
Sabra16G0231000 Salix brachista HOM05D004777 ORTHO05D006240 7.6e-53 211.5 191 59.2
AUR62043215 Chenopodium quinoa HOM05D004777 ORTHO05D006240 9.9e-53 211.1 185 60.5
MELO3C009952.2 Cucumis melo HOM05D004777 ORTHO05D006240 1.7e-52 210.3 187 64.2
ClCG10G014260 Citrullus lanatus HOM05D004777 ORTHO05D006240 2.2e-52 209.9 189 63.5
TAR374G0088 Trochodendron aralioides HOM05D004777 ORTHO05D006240 2.2e-52 209.9 184 60.9
RcHm_v2.0_Chr2g0171371 Rosa chinensis HOM05D004777 ORTHO05D006240 3.8e-52 209.1 172 63.4
Sc16g0005400 Simmondsia chinensis HOM05D004777 ORTHO05D006240 3.8e-52 209.1 161 66.5
THA.LOC104802404 Tarenaya hassleriana HOM05D004777 ORTHO05D006240 4.9e-52 208.8 157 66.2
Glyma.19G009700 Glycine max HOM05D004777 ORTHO05D006240 6.4e-52 208.4 212 55.7
Lj2g0000040 Lotus japonicus HOM05D004777 ORTHO05D006240 6.4e-52 208.4 204 54.4
Medtr6g007607 Medicago truncatula HOM05D004777 ORTHO05D006240 6.4e-52 208.4 195 57.9
Eucgr.I01816 Eucalyptus grandis HOM05D004777 ORTHO05D006240 8.4e-52 208.0 196 57.7
Phvul.004G017000 Phaseolus vulgaris HOM05D004777 ORTHO05D006240 8.4e-52 208.0 212 54.2
Hund02275 Selenicereus undatus HOM05D004777 ORTHO05D006240 8.4e-52 208.0 168 64.3
Zm00001eb042520 Zea mays HOM05D004777 ORTHO05D006240 1.1e-51 207.6 165 63.6
Glyma.13G169500 Glycine max HOM05D004777 ORTHO05D006240 1.9e-51 206.8 212 55.2
Lalb_Chr21g0319421 Lupinus albus HOM05D004777 ORTHO05D006240 1.9e-51 206.8 161 65.2
MD17G1035100 Malus domestica HOM05D004777 ORTHO05D006240 3.2e-51 206.1 166 63.3
Ca_04203_v3 Cicer arietinum L. HOM05D004777 ORTHO05D006240 4.2e-51 205.7 162 65.4
AUR62035505 Chenopodium quinoa HOM05D004777 ORTHO05D006240 5.4e-51 205.3 185 59.5
vmacro18239 Vaccinium macrocarpon HOM05D004777 ORTHO05D006240 7.1e-51 204.9 181 60.8
Atru.BG.27.p Acer truncatum HOM05D004777 ORTHO05D006240 9.3e-51 204.5 158 68.4
PGR142G2638 Punica granatum HOM05D004777 ORTHO05D006240 9.3e-51 204.5 191 60.2
Sed0004879 Sechium edule HOM05D004777 ORTHO05D006240 1.2e-50 204.1 183 61.2
VMungo0464G0641 Vigna mungo HOM05D004777 ORTHO05D006240 1.2e-50 204.1 212 53.3
Gohir.A09G026100 Gossypium hirsutum HOM05D004777 ORTHO05D006240 4.6e-50 202.2 161 65.8
Gorai.006G029700 Gossypium raimondii HOM05D004777 ORTHO05D006240 6.0e-50 201.8 161 65.2
Hma1.2p1_0802F.1_g220410 Hydrangea macrophylla HOM05D004777 ORTHO05D006240 1.0e-49 201.1 172 61.0
Nitab4.5_0003337g0100 Nicotiana tabacum HOM05D004777 ORTHO05D006240 1.3e-49 200.7 159 65.4
Ciclev10015286m.g Citrus clementina HOM05D004777 ORTHO05D006240 2.3e-49 199.9 190 57.9
Gohir.D09G025500 Gossypium hirsutum HOM05D004777 ORTHO05D006240 2.3e-49 199.9 161 64.6
Aqoxy3G01003 Aquilegia oxysepala HOM05D004777 ORTHO05D006240 3.0e-49 199.5 178 60.1
Migut.H00126 Erythranthe guttata HOM05D004777 ORTHO05D006240 3.0e-49 199.5 187 57.2
Rhsim08G0055400 Rhododendron simsii HOM05D004777 ORTHO05D006240 3.0e-49 199.5 164 62.8
Lju41A35T60 Lonicera japonica HOM05D004777 ORTHO05D006240 5.1e-49 198.7 165 63.0
Lalb_Chr06g0176061 Lupinus albus HOM05D004777 ORTHO05D006240 5.1e-49 198.7 190 56.8
Ah.04g163480 Amaranthus hybridus HOM05D004777 ORTHO05D006240 8.7e-49 198.0 168 62.5
MSTRG.3173 Avicennia marina HOM05D004777 ORTHO05D006240 8.7e-49 198.0 197 56.3
Lsat_1_v5_gn_0_26221 Lactuca sativa HOM05D004777 ORTHO05D006240 1.1e-48 197.6 157 62.4
Nn4g22807 Nelumbo nucifera HOM05D004777 ORTHO05D006240 1.1e-48 197.6 219 50.7
FAN05G4199 Fragaria x ananassa HOM05D004777 ORTHO05D006240 1.5e-48 197.2 166 62.0
Nitab4.5_0005176g0090 Nicotiana tabacum HOM05D004777 ORTHO05D006240 1.5e-48 197.2 180 58.9
Oeu043064.1 Olea europaea HOM05D004777 ORTHO05D006240 1.5e-48 197.2 198 54.5
PGSC0003DMG401000527 Solanum tuberosum HOM05D004777 ORTHO05D006240 1.5e-48 197.2 177 59.9
Carub.0003s0061 Capsella rubella HOM05D004777 ORTHO05D006240 1.9e-48 196.8 179 57.0
PSO017G2091 Papaver somniferum HOM05D004777 ORTHO05D006240 1.9e-48 196.8 179 58.1
HanXRQChr17g0547881 Helianthus annuus HOM05D004777 ORTHO05D006240 2.5e-48 196.4 213 51.6
Lj7A591G73 Lonicera japonica HOM05D004777 ORTHO05D006240 2.5e-48 196.4 157 63.1
EL10Ac4g08570 Beta vulgaris HOM05D004777 ORTHO05D006240 3.3e-48 196.1 167 60.5
PSO478G4796 Papaver somniferum HOM05D004777 ORTHO05D006240 3.3e-48 196.1 179 58.1
FvH4_6g50590 Fragaria vesca HOM05D004777 ORTHO05D006240 4.3e-48 195.7 170 60.6
Solyc02g086910.4 Solanum lycopersicum HOM05D004777 ORTHO05D006240 4.3e-48 195.7 186 58.1
TPR.G2322 Trifolium pratense HOM05D004777 ORTHO05D006240 4.3e-48 195.7 195 54.9
COL.COLO4_28942 Corchorus olitorius HOM05D004777 ORTHO05D006240 5.6e-48 195.3 139 71.9
FAN09G3008 Fragaria x ananassa HOM05D004777 ORTHO05D006240 5.6e-48 195.3 170 60.6
CARHR075480 Cardamine hirsuta HOM05D004777 ORTHO05D006240 7.3e-48 194.9 183 55.7
FAN14G1693 Fragaria x ananassa HOM05D004777 ORTHO05D006240 7.3e-48 194.9 157 65.0
FAN14G5049 Fragaria x ananassa HOM05D004777 ORTHO05D006240 7.3e-48 194.9 157 65.0
Peaxi162Scf00129g01038 Petunia axillaris HOM05D004777 ORTHO05D006240 7.3e-48 194.9 159 63.5
AT3G01480 Arabidopsis thaliana HOM05D004777 ORTHO05D006240 1.6e-47 193.7 176 57.4
Sopen02g031680 Solanum pennellii HOM05D004777 ORTHO05D006240 1.6e-47 193.7 186 57.5
Aa31LG5G10580 Aethionema arabicum HOM05D004777 ORTHO05D006240 2.1e-47 193.4 178 56.2
ECA246G3514 Erigeron canadensis HOM05D004777 ORTHO05D006240 2.1e-47 193.4 157 63.1
DCAR_011208 Daucus carota HOM05D004777 ORTHO05D006240 4.8e-47 192.2 223 52.0
Psat1g057880 Pisum sativum HOM05D004777 ORTHO05D006240 8.1e-47 191.4 212 49.5
Actinidia16931 Actinidia chinensis HOM05D004777 ORTHO05D006240 1.4e-46 190.7 183 57.9
Thhalv10020775m.g Eutrema salsugineum HOM05D004777 ORTHO05D006240 1.8e-46 190.3 158 60.8
SalBow1G4936 Salvia bowleyana HOM05D004777 ORTHO05D006240 1.8e-46 190.3 178 57.9
C09p75120 Brassica napus HOM05D004777 ORTHO05D006240 2.4e-46 189.9 159 62.9
SGA_v2.0_scaffold135G34858 Striga asiatica HOM05D004777 ORTHO05D006240 6.9e-46 188.3 187 56.1
Sp3g00590 Schrenkiella parvula HOM05D004777 ORTHO05D006240 9.0e-46 188.0 175 56.6
BolC5t35152H Brassica oleracea HOM05D004777 ORTHO05D006240 1.2e-45 187.6 179 56.4
Cc07_g02330 Coffea canephora HOM05D004777 ORTHO05D006240 4.5e-45 185.7 158 61.4
ATR0730G054 Amborella trichopoda HOM05D004777 ORTHO05D006240 5.8e-45 185.3 157 63.7
BraA05t23204Z Brassica rapa HOM05D004777 ORTHO05D006240 7.6e-45 184.9 157 61.8
A05p44530 Brassica napus HOM05D004777 ORTHO05D006240 1.7e-44 183.7 157 61.1
AL3G10690 Arabidopsis lyrata HOM05D004777 ORTHO05D006240 2.9e-44 183.0 158 59.5
unitig_21.g20495 Utricularia gibba HOM05D004777 ORTHO05D006240 1.1e-43 181.0 160 60.0
SEGI_33645 Sequoiadendron giganteum HOM05D004777 ORTHO05D006240 1.6e-42 177.2 154 62.3
RcHm_v2.0_Chr2g0171361 Rosa chinensis HOM05D004777 ORTHO05D006240 1.1e-38 164.5 158 55.7
CSS0037258 Camellia sinensis var. sinensis HOM05D004777 ORTHO05D000072 9.3e-35 151.4 143 57.3
AagrBONN_evm.TU.Sc2ySwM_368.1753 Anthoceros agrestis HOM05D004777 ORTHO05D006240 6.0e-34 148.7 183 45.9
MBI02_g21155_MAGBIO Magnolia biondii HOM05D004777 ORTHO05D006240 2.3e-33 146.7 104 74.0
FAN14G3936 Fragaria x ananassa HOM05D004777 ORTHO05D006240 8.7e-33 144.8 149 53.7
SEGI_25189 Sequoiadendron giganteum HOM05D004777 ORTHO05D006240 1.3e-31 141.0 133 54.1
RcHm_v2.0_Chr2g0171281 Rosa chinensis HOM05D004777 ORTHO05D006240 2.1e-31 140.2 107 68.2
Pp3c15_550 Physcomitrium patens HOM05D004777 ORTHO05D006240 1.5e-29 134.0 161 48.4
Mapoly0001s0360 Marchantia polymorpha HOM05D004777 ORTHO05D006240 2.9e-28 129.8 126 53.2
CBR_g37206 Chara braunii HOM05D004777 ORTHO05D006240 3.8e-28 129.4 133 52.6
Pp3c9_660 Physcomitrium patens HOM05D004777 ORTHO05D006240 3.8e-28 129.4 175 44.6
MBI08_g43535_MAGBIO Magnolia biondii HOM05D004777 ORTHO05D006240 1.2e-26 124.4 86 74.4
Pp3c26_630 Physcomitrium patens HOM05D004777 ORTHO05D006240 1.6e-23 114.0 124 50.0
SMO146G0026 Selaginella moellendorffii HOM05D004777 ORTHO05D006240 3.7e-23 112.8 152 42.8
Cre03.g189800 Chlamydomonas reinhardtii HOM05D004777 ORTHO05D006240 2.6e-21 106.7 166 39.2
BcaB08g36813 Brassica carinata HOM05D004777 ORTHO05D006240 2.0e-13 80.5 67 55.2
MCO01G434 Micromonas commoda HOM05D004777 ORTHO05D006240 7.2e-11 72.0 113 38.9
A02p21620 Brassica napus HOM05D004777 ORTHO05D006240 2.3e-09 67.0 63 50.8
A02p21700 Brassica napus HOM05D004777 ORTHO05D006240 2.3e-09 67.0 63 50.8
C09p47230 Brassica napus HOM05D004777 ORTHO05D006240 8.2e-07 58.5 51 51.0
BolC2t09566H Brassica oleracea HOM05D004777 ORTHO05D022002 1.4e-06 57.8 51 51.0
AagrBONN_evm.TU.Sc2ySwM_117.2587 Anthoceros agrestis HOM05D006800 ORTHO05D008478 9.1e-06 55.1 195 25.1
SGA_v2.0_scaffold2726G54193 Striga asiatica HOM05D004777 ORTHO05D006240 9.1e-06 55.1 77 42.9


User provided reference genes

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