Gene: TPR.G2322
General Information
Structural Information
- Species Trifolium pratense
- Gene Identifier TPR.G2322
- Transcript Identifier TPR.T2384
- Gene Type Coding gene
- Location Tp57577_TGAC_v2_LG2 : 8417838-8425948 : negative
Gene Family Information
- ID HOM05D004777
- #Genes/#Species 154/98
- Phylogenetic origin
- ID ORTHO05D006240
- #Genes/#Species 145/98
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Tp57577_TGAC_v2_mRNA2384.v2
- id Tp57577_TGAC_v2_gene2322.v2
- pacid 35972928
- uniprot A0A2K3NQ98
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000413 | IEA | GOA Database | protein peptidyl-prolyl isomerization | |
| GO:0000413 | IEA | InterPro | protein peptidyl-prolyl isomerization | |
| GO:0042742 | ISO | PLAZA Integrative Orthology | defense response to bacterium | AT3G01480 |
| GO:0010102 | ISO | PLAZA Integrative Orthology | lateral root morphogenesis | AT3G01480 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005509 | IEA | InterPro | calcium ion binding | |
| GO:0003755 | IEA | GOA Database | peptidyl-prolyl cis-trans isomerase activity | |
| GO:0003755 | IEA | InterPro | peptidyl-prolyl cis-trans isomerase activity | |
| GO:0016853 | IEA | GOA Database | isomerase activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009579 | IEA | GOA Database | thylakoid | |
| GO:0009570 | ISO | PLAZA Integrative Orthology | chloroplast stroma | AT3G01480 |
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT3G01480 |
| GO:0031977 | ISO | PLAZA Integrative Orthology | thylakoid lumen | AT3G01480 |
| GO:0009534 | ISO | PLAZA Integrative Orthology | chloroplast thylakoid | AT3G01480 |
| GO:0009535 | ISO | PLAZA Integrative Orthology | chloroplast thylakoid membrane | AT3G01480 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR002048 | EF-hand domain |
| IPR029000 | Cyclophilin-like domain superfamily |
| IPR044665 | Cyclophilin-type peptidyl-prolyl cis-trans isomerase, E. coli cyclophilin A-like |
| IPR011992 | EF-hand domain pair |
| IPR002130 | Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain |
| IPR023222 | PsbQ-like domain superfamily |
| Mapman id | Description |
|---|---|
| 1.1.1.4.8 | Photosynthesis.photophosphorylation.photosystem II.repair and reassembly cycle.assembly factor (CYP38) |
| 14.6.1.1 | DNA damage response.nucleotide excision repair (NER).global genome nucleotide excision repair (GG-NER).multifunctional centrin (CEN1/2) |
| 16.10.2.3 | RNA processing.messenger ribonucleoparticle (mRNP) export.TREX-2 mRNP trafficking complex.centrin component CEN1/2 |
| 18.13.1 | Protein modification.protein folding.protein folding catalyst (Cyclophilin) |
| 27.7.2 | Multi-process regulation.calcium-dependent signalling.calcium sensor (CML) |