Gene: Sopen02g031680

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen02g031680
  • Transcript Identifier Sopen02g031680.1
  • Gene Type Coding gene
  • Location Spenn-ch02 : 53639704-53642909 : negative

Gene Family Information

  • ID HOM05D004777
  • #Genes/#Species 154/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen02g031680.1

Descriptions

  • Description Encodes a chloroplast cyclophilin functioning in the assembly and maintenance of photosystem II (PSII) supercomplexes. | cyclophilin 38 (CYP38) | FUNCTIONS IN: peptidyl-prolyl cis-trans isomerase activity | INVOLVED IN: protein folding, photosystem II assembly, photosystem II stabilization, defense response to bacterium | LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast thylakoid lumen, chloroplast | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Cyclophilin-like , Peptidyl-prolyl cis-trans isomerase, cyclophilin-type | BEST Arabidopsis thaliana protein match is: Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000413
IEA
InterProprotein peptidyl-prolyl isomerization
GO:0042742
ISO
PLAZA Integrative Orthologydefense response to bacterium AT3G01480
GO:0010102
ISO
PLAZA Integrative Orthologylateral root morphogenesis AT3G01480

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003755
IEA
InterPropeptidyl-prolyl cis-trans isomerase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009570
ISO
PLAZA Integrative Orthologychloroplast stroma AT3G01480
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT3G01480
GO:0031977
ISO
PLAZA Integrative Orthologythylakoid lumen AT3G01480
GO:0009534
ISO
PLAZA Integrative Orthologychloroplast thylakoid AT3G01480
GO:0009579
ISO
PLAZA Integrative Orthologythylakoid AT3G01480
GO:0009535
ISO
PLAZA Integrative Orthologychloroplast thylakoid membrane AT3G01480

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain
IPR023222 PsbQ-like domain superfamily
IPR029000 Cyclophilin-like domain superfamily
IPR044665 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, E. coli cyclophilin A-like
Mapman id Description
1.1.1.4.8 Photosynthesis.photophosphorylation.photosystem II.repair and reassembly cycle.assembly factor (CYP38)
18.13.1 Protein modification.protein folding.protein folding catalyst (Cyclophilin)