Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE06G1284 Ceratophyllum demersum HOM05D005584 ORTHO05D006809 1.3e-117 426.4 209 100.0
TAR374G1289 Trochodendron aralioides HOM05D005584 ORTHO05D006809 3.7e-61 238.8 231 56.7
MBI10_g28000_MAGBIO Magnolia biondii HOM05D005584 ORTHO05D006809 7.8e-59 231.1 218 57.8
Prupe.4G221000 Prunus persica HOM05D005584 ORTHO05D006809 1.5e-57 226.9 231 54.1
Ciclev10032655m.g Citrus clementina HOM05D005584 ORTHO05D006809 4.3e-57 225.3 231 53.2
CSS0021029 Camellia sinensis var. sinensis HOM05D005584 ORTHO05D006809 1.2e-56 223.8 209 57.4
RcHm_v2.0_Chr5g0041131 Rosa chinensis HOM05D005584 ORTHO05D006809 1.6e-56 223.4 235 52.8
Dinv15274 Davidia involucrata HOM05D001482 ORTHO05D001499 2.8e-56 222.6 231 54.1
Hma1.2p1_0587F.1_g184080 Hydrangea macrophylla HOM05D005584 ORTHO05D006809 1.1e-55 220.7 233 53.2
MD11G1211500 Malus domestica HOM05D005584 ORTHO05D006809 1.1e-55 220.7 235 51.5
Cpa.g.sc69.68 Carica papaya HOM05D005584 ORTHO05D006809 1.4e-55 220.3 231 51.1
Nn2g14080 Nelumbo nucifera HOM05D005584 ORTHO05D006809 1.4e-55 220.3 233 54.5
Aqoxy3G01083 Aquilegia oxysepala HOM05D005584 ORTHO05D006809 3.1e-55 219.2 215 54.4
CSS0030415 Camellia sinensis var. sinensis HOM05D005584 ORTHO05D006809 6.8e-55 218.0 221 54.8
TWI18G1102 Tripterygium wilfordii HOM05D005584 ORTHO05D006809 2.6e-54 216.1 233 52.4
Haze_12208 Corylus avellana HOM05D005584 ORTHO05D006809 9.9e-54 214.2 214 55.1
FvH4_3g23340 Fragaria vesca HOM05D005584 ORTHO05D006809 9.9e-54 214.2 235 50.6
PGR142G0158 Punica granatum HOM05D005584 ORTHO05D006809 9.9e-54 214.2 231 52.4
Thecc.02G253500 Theobroma cacao HOM05D005584 ORTHO05D006809 9.9e-54 214.2 229 51.1
Nn4g22723 Nelumbo nucifera HOM05D005584 ORTHO05D006809 1.7e-53 213.4 233 54.1
PSO017G5970 Papaver somniferum HOM05D005584 ORTHO05D006809 2.2e-53 213.0 232 53.0
vmacro01156 Vaccinium macrocarpon HOM05D005584 ORTHO05D006809 2.2e-53 213.0 227 53.3
FAN16G0047 Fragaria x ananassa HOM05D005584 ORTHO05D006809 2.9e-53 212.6 237 49.8
PSO478G2901 Papaver somniferum HOM05D005584 ORTHO05D006809 2.9e-53 212.6 230 52.2
Atru.chr11.2060 Acer truncatum HOM05D005584 ORTHO05D006809 4.9e-53 211.8 231 51.1
COL.COLO4_24203 Corchorus olitorius HOM05D005584 ORTHO05D006809 4.9e-53 211.8 229 50.2
FAN21G3548 Fragaria x ananassa HOM05D005584 ORTHO05D006809 4.9e-53 211.8 232 50.0
Gohir.A01G162200 Gossypium hirsutum HOM05D005584 ORTHO05D006809 1.1e-52 210.7 230 52.2
GSVIVG01013774001 Vitis vinifera HOM05D005584 ORTHO05D006809 1.1e-52 210.7 232 50.4
Duzib251G0376 Durio zibethinus HOM05D005584 ORTHO05D006809 1.4e-52 210.3 229 50.2
Actinidia08155 Actinidia chinensis HOM05D005584 ORTHO05D006809 1.9e-52 209.9 232 53.0
Rhsim12G0043700 Rhododendron simsii HOM05D005584 ORTHO05D006809 1.9e-52 209.9 229 53.7
Sed0009924 Sechium edule HOM05D005584 ORTHO05D006809 2.4e-52 209.5 227 49.3
FAN25G2737 Fragaria x ananassa HOM05D005584 ORTHO05D006809 3.2e-52 209.1 235 50.2
Ca_28318_v3 Cicer arietinum L. HOM05D005584 ORTHO05D006809 5.4e-52 208.4 234 49.1
arahy.Tifrunner.gnm1.ann1.0L0HR0 Arachis hypogaea HOM05D005584 ORTHO05D006809 7.1e-52 208.0 226 51.3
arahy.Tifrunner.gnm1.ann1.5FW2L6 Arachis hypogaea HOM05D005584 ORTHO05D006809 7.1e-52 208.0 226 51.3
Oeu056410.1 Olea europaea HOM05D005584 ORTHO05D006809 9.2e-52 207.6 220 50.5
CANSAT56G2850 Cannabis sativa HOM05D005584 ORTHO05D006809 1.6e-51 206.8 230 48.3
QL03p059496 Quercus lobata HOM05D005584 ORTHO05D006809 2.1e-51 206.5 235 48.1
Gohir.D08G021700 Gossypium hirsutum HOM05D005584 ORTHO05D006809 2.7e-51 206.1 232 50.9
AUR62014068 Chenopodium quinoa HOM05D005584 ORTHO05D006809 3.5e-51 205.7 231 49.4
Lj1g0002439 Lotus japonicus HOM05D005584 ORTHO05D006809 4.6e-51 205.3 224 50.4
Manes.12G026800 Manihot esculenta HOM05D005584 ORTHO05D006809 4.6e-51 205.3 231 49.8
Phvul.011G052800 Phaseolus vulgaris HOM05D005584 ORTHO05D006809 4.6e-51 205.3 228 49.6
CsaV3_2G024710 Cucumis sativus L. HOM05D005584 ORTHO05D006809 7.8e-51 204.5 227 48.9
Medtr5g077780 Medicago truncatula HOM05D005584 ORTHO05D006809 1.0e-50 204.1 235 49.8
CiPaw.05G185800 Carya illinoinensis HOM05D005584 ORTHO05D006809 1.7e-50 203.4 232 50.4
Gohir.D05G347832 Gossypium hirsutum HOM05D005584 ORTHO05D006809 1.7e-50 203.4 231 49.4
Eucgr.K03598 Eucalyptus grandis HOM05D005584 ORTHO05D006809 2.3e-50 203.0 228 49.1
MSTRG.2403 Avicennia marina HOM05D005584 ORTHO05D006809 8.6e-50 201.1 227 48.9
Gohir.D01G149500 Gossypium hirsutum HOM05D005584 ORTHO05D006809 1.5e-49 200.3 231 48.9
Lj3g0022996 Lotus japonicus HOM05D005584 ORTHO05D006809 1.5e-49 200.3 224 49.6
Cfa009174 Carpinus fangiana HOM05D005584 ORTHO05D006809 1.9e-49 199.9 210 51.9
Potri.009G167600 Populus trichocarpa HOM05D005584 ORTHO05D006809 1.9e-49 199.9 230 50.0
Migut.E00177 Erythranthe guttata HOM05D005584 ORTHO05D006809 4.3e-49 198.7 231 46.8
Sopen08g021760 Solanum pennellii HOM05D005584 ORTHO05D006809 4.3e-49 198.7 234 49.6
PGSC0003DMG400033619 Solanum tuberosum HOM05D005584 ORTHO05D006809 7.3e-49 198.0 234 49.1
Cc08_g15830 Coffea canephora HOM05D005584 ORTHO05D006809 9.5e-49 197.6 219 50.7
Sabra09G0130200 Salix brachista HOM05D005584 ORTHO05D006809 1.6e-48 196.8 236 48.7
Lalb_Chr12g0210051 Lupinus albus HOM05D005584 ORTHO05D006809 2.1e-48 196.4 231 48.9
Psat2g045680 Pisum sativum HOM05D005584 ORTHO05D006809 2.8e-48 196.1 228 49.6
Solyc08g067820.3 Solanum lycopersicum HOM05D005584 ORTHO05D006809 4.7e-48 195.3 234 49.1
FAN11G0752 Fragaria x ananassa HOM05D005584 ORTHO05D006809 8.1e-48 194.5 209 50.7
VMungo1127G1231 Vigna mungo HOM05D005584 ORTHO05D006809 1.2e-46 190.7 203 51.2
BraA07t29554Z Brassica rapa HOM05D005584 ORTHO05D006809 2.0e-46 189.9 223 47.5
A07p18380 Brassica napus HOM05D005584 ORTHO05D006809 3.4e-46 189.1 223 46.6
Sp4g10620 Schrenkiella parvula HOM05D005584 ORTHO05D006809 7.6e-46 188.0 235 46.0
BcaC02g10906 Brassica carinata HOM05D005584 ORTHO05D006809 1.7e-45 186.8 223 47.1
Carub.0004s0855 Capsella rubella HOM05D005584 ORTHO05D006809 1.7e-45 186.8 225 48.0
C04p23810 Brassica napus HOM05D005584 ORTHO05D006809 4.9e-45 185.3 223 47.1
Thhalv10017205m.g Eutrema salsugineum HOM05D005584 ORTHO05D006809 4.9e-45 185.3 229 46.3
Zm00001eb209860 Zea mays HOM05D005584 ORTHO05D006809 4.9e-45 185.3 258 43.4
Lsat_1_v5_gn_9_120260 Lactuca sativa HOM05D005584 ORTHO05D006809 6.4e-45 184.9 234 47.4
ECA233G2638 Erigeron canadensis HOM05D005584 ORTHO05D006809 8.4e-45 184.5 228 46.1
BolC4t23879H Brassica oleracea HOM05D005584 ORTHO05D006809 2.4e-44 183.0 223 46.6
AL4G22490 Arabidopsis lyrata HOM05D005584 ORTHO05D006809 3.2e-44 182.6 224 46.9
unitig_62.g23668 Utricularia gibba HOM05D005584 ORTHO05D006809 4.2e-44 182.2 217 47.5
CARHR120490 Cardamine hirsuta HOM05D005584 ORTHO05D006809 7.1e-44 181.4 222 47.3
Peaxi162Scf00105g01417 Petunia axillaris HOM05D005584 ORTHO05D006809 2.1e-43 179.9 213 48.8
ClCG08G017930 Citrullus lanatus HOM05D005584 ORTHO05D006809 3.5e-43 179.1 208 48.6
Hund25366 Selenicereus undatus HOM05D005584 ORTHO05D003410 1.7e-42 176.8 272 39.0
HPP92_004538 Vanilla planifolia HOM05D005584 ORTHO05D006809 3.0e-42 176.0 209 48.3
BcaB02g10116 Brassica carinata HOM05D005584 ORTHO05D006809 5.1e-42 175.3 202 46.0
Gorai.002G185600 Gossypium raimondii HOM05D005584 ORTHO05D006809 5.6e-41 171.8 211 47.4
HanXRQChr12g0371541 Helianthus annuus HOM05D005584 ORTHO05D006809 9.6e-41 171.0 205 46.3
SGA_v2.0_scaffold57G20112 Striga asiatica HOM05D005584 ORTHO05D006809 9.6e-41 171.0 201 46.8
Aa31LG5G8210 Aethionema arabicum HOM05D005584 ORTHO05D006809 1.8e-39 166.8 260 41.2
Glyma.12G050500 Glycine max HOM05D005584 ORTHO05D006809 1.8e-39 166.8 92 78.3
MELO3C010671.2 Cucumis melo HOM05D005584 ORTHO05D006809 3.1e-39 166.0 211 47.4
ATR1091G072 Amborella trichopoda HOM05D005584 ORTHO05D006809 6.9e-39 164.9 214 46.3
Nitab4.5_0006579g0040 Nicotiana tabacum HOM05D005584 ORTHO05D006809 3.4e-38 162.5 92 75.0
Nitab4.5_0000125g0200 Nicotiana tabacum HOM05D005584 ORTHO05D006809 7.6e-38 161.4 93 74.2
CANSAT64G2516 Cannabis sativa HOM05D002890 ORTHO05D005855 2.2e-37 159.8 92 73.9
SalBow8G4058 Salvia bowleyana HOM05D005584 ORTHO05D006809 3.2e-36 156.0 218 42.7
TPR.G25316 Trifolium pratense HOM05D005584 ORTHO05D006809 4.2e-36 155.6 94 72.3
Gorai.001G098200 Gossypium raimondii HOM05D005584 ORTHO05D006809 4.6e-35 152.1 196 43.9
SGA_v2.0_scaffold74G24685 Striga asiatica HOM05D005584 ORTHO05D006809 1.3e-34 150.6 193 44.6
AUR62005408 Chenopodium quinoa HOM05D005584 ORTHO05D006809 1.7e-34 150.2 239 39.7
EL10Ac6g13701 Beta vulgaris HOM05D005584 ORTHO05D006809 8.7e-34 147.9 229 40.6
Lj6A807T86 Lonicera japonica HOM05D005584 ORTHO05D006809 3.3e-33 146.0 233 39.5
Potri.006G221301 Populus trichocarpa HOM05D005584 ORTHO05D006809 4.3e-33 145.6 188 44.7
Gorai.009G374800 Gossypium raimondii HOM05D005584 ORTHO05D006809 2.8e-32 142.9 231 41.1
SEGI_24248 Sequoiadendron giganteum HOM05D005584 ORTHO05D006809 6.2e-32 141.7 257 40.5
TPR.G23699 Trifolium pratense HOM05D005584 ORTHO05D006809 6.2e-32 141.7 224 41.5
AT5G27300 Arabidopsis thaliana HOM05D005584 ORTHO05D006809 8.1e-32 141.4 212 42.0
Lsat_1_v5_gn_8_155560 Lactuca sativa HOM05D005584 ORTHO05D006809 1.8e-31 140.2 194 43.8
BcaB06g28170 Brassica carinata HOM05D005584 ORTHO05D006809 5.8e-30 135.2 84 67.9
Mapoly0029s0094 Marchantia polymorpha HOM05D005584 ORTHO05D006809 5.8e-30 135.2 83 69.9
Pp3c16_13430 Physcomitrium patens HOM05D005584 ORTHO05D006809 7.6e-30 134.8 253 36.4
Eucgr.D00612 Eucalyptus grandis HOM05D005584 ORTHO05D006809 2.1e-27 126.7 173 41.0
Hma1.2p1_0223F.1_g094390 Hydrangea macrophylla HOM05D005584 ORTHO05D006809 1.0e-26 124.4 179 45.3
Dinv24830 Davidia involucrata HOM05D005584 ORTHO05D006809 1.5e-25 120.6 179 43.6
Sc11g0001080 Simmondsia chinensis HOM05D005584 ORTHO05D006809 3.3e-25 119.4 171 41.5
Ah.02g130030 Amaranthus hybridus HOM05D005584 ORTHO05D006809 3.7e-24 115.9 183 38.8
SMO361G0752 Selaginella moellendorffii HOM05D005584 ORTHO05D006809 2.9e-21 106.3 67 62.7
DCAR_026533 Daucus carota HOM05D005584 ORTHO05D006809 8.4e-21 104.8 173 39.3
COL.COLO4_24201 Corchorus olitorius HOM05D005584 ORTHO05D006809 1.2e-19 100.9 57 73.7
QL01p007518 Quercus lobata HOM05D005584 ORTHO05D006809 2.3e-18 96.7 156 37.8
Ca_05838_v3 Cicer arietinum L. HOM05D005584 ORTHO05D006809 1.5e-17 94.0 49 81.6
AT2G27790 Arabidopsis thaliana HOM05D005584 ORTHO05D006809 9.0e-15 84.7 143 36.4
CAN.G414.8 Capsicum annuum HOM05D000928 ORTHO05D001186 7.6e-14 81.6 50 66.0
CAN.G21.11 Capsicum annuum HOM05D005584 ORTHO05D006809 2.9e-13 79.7 46 71.7
Hund18879 Selenicereus undatus HOM05D005584 ORTHO05D006809 9.3e-12 74.7 49 69.4
SHI17678 Sapria himalayana HOM05D005584 ORTHO05D006809 2.1e-11 73.6 41 75.6
CBR_g19306 Chara braunii HOM05D005584 ORTHO05D006809 7.9e-11 71.6 38 73.7
Gorai.004G016800 Gossypium raimondii HOM05D005584 ORTHO05D006809 7.4e-09 65.1 69 53.6
Glyma.11G125900 Glycine max HOM05D005584 ORTHO05D006809 3.1e-07 59.7 29 89.7


User provided reference genes

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