Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G1980 Ceratophyllum demersum HOM05D006375 ORTHO05D008188 0.0e+00 1752.6 883 100.0
Nn3g18305 Nelumbo nucifera HOM05D006375 ORTHO05D008188 1.7e-235 820.1 848 54.1
Actinidia06495 Actinidia chinensis HOM05D006375 ORTHO05D008188 7.7e-225 784.6 895 50.7
TAR374G0480 Trochodendron aralioides HOM05D006375 ORTHO05D008188 1.3e-224 783.9 875 51.8
Nitab4.5_0010112g0040 Nicotiana tabacum HOM05D006375 ORTHO05D008188 3.4e-220 769.2 871 50.1
Nitab4.5_0000201g0170 Nicotiana tabacum HOM05D006375 ORTHO05D008188 1.7e-219 766.9 871 50.1
CSS0034734 Camellia sinensis var. sinensis HOM05D006375 ORTHO05D008188 6.3e-219 765.0 891 49.9
Hma1.2p1_0158F.1_g070200 Hydrangea macrophylla HOM05D006375 ORTHO05D008188 8.3e-219 764.6 867 50.1
PSO478G2715 Papaver somniferum HOM05D006375 ORTHO05D008188 2.0e-217 760.0 887 49.0
Thecc.04G114800 Theobroma cacao HOM05D006375 ORTHO05D008188 2.5e-215 753.1 895 49.4
Aqoxy3G00081 Aquilegia oxysepala HOM05D006375 ORTHO05D008188 1.4e-213 747.3 828 50.5
QL93p0100_0515 Quercus lobata HOM05D006375 ORTHO05D008188 6.8e-213 745.0 888 49.1
Rhsim10G0177200 Rhododendron simsii HOM05D006375 ORTHO05D008188 8.9e-213 744.6 884 49.0
Ciclev10010990m.g Citrus clementina HOM05D006375 ORTHO05D008188 3.4e-212 742.7 867 49.9
Gohir.A07G078100 Gossypium hirsutum HOM05D006375 ORTHO05D008188 5.7e-212 741.9 866 49.3
Lj4C263T11 Lonicera japonica HOM05D006375 ORTHO05D008188 5.7e-212 741.9 888 48.8
QL02p058134 Quercus lobata HOM05D006375 ORTHO05D008188 5.7e-212 741.9 896 49.1
Cfa007814 Carpinus fangiana HOM05D006375 ORTHO05D008188 9.8e-212 741.1 895 47.9
ATR0564G422 Amborella trichopoda HOM05D006375 ORTHO05D008188 1.7e-211 740.3 886 48.9
Solyc11g011150.2 Solanum lycopersicum HOM05D006375 ORTHO05D008188 2.2e-211 740.0 874 49.2
PGSC0003DMG400015671 Solanum tuberosum HOM05D006375 ORTHO05D008188 1.4e-210 737.3 872 48.9
Potri.004G087400 Populus trichocarpa HOM05D006375 ORTHO05D008188 3.2e-210 736.1 882 49.8
Sopen11g005910 Solanum pennellii HOM05D006375 ORTHO05D008188 1.6e-209 733.8 874 48.2
Sc14g0006560 Simmondsia chinensis HOM05D006375 ORTHO05D008188 3.5e-209 732.6 859 49.0
PSO017G5819 Papaver somniferum HOM05D006375 ORTHO05D008188 1.0e-208 731.1 909 47.5
VMungo0647G2002 Vigna mungo HOM05D006375 ORTHO05D008188 2.9e-208 729.6 869 49.7
LjContig00141g0022245 Lotus japonicus HOM05D006375 ORTHO05D008188 1.9e-207 726.9 859 48.9
Haze_14261 Corylus avellana HOM05D006375 ORTHO05D008188 3.3e-207 726.1 941 46.9
Glyma.14G214000 Glycine max HOM05D006375 ORTHO05D008188 4.3e-207 725.7 861 48.7
Sabra04G0058300 Salix brachista HOM05D006375 ORTHO05D008188 4.3e-207 725.7 876 49.1
Atru.chr1.1908 Acer truncatum HOM05D006375 ORTHO05D008188 5.6e-207 725.3 869 48.8
Manes.01G118300 Manihot esculenta HOM05D006375 ORTHO05D008188 9.5e-207 724.5 881 47.4
Gohir.D07G082900 Gossypium hirsutum HOM05D006375 ORTHO05D008188 1.2e-206 724.2 874 49.0
Gorai.001G088500 Gossypium raimondii HOM05D006375 ORTHO05D008188 1.6e-206 723.8 869 48.4
CANSAT64G0280 Cannabis sativa HOM05D006375 ORTHO05D008188 1.5e-204 717.2 877 47.3
EL10Ac6g15274 Beta vulgaris HOM05D006375 ORTHO05D008188 3.4e-204 716.1 870 48.2
Hund04476 Selenicereus undatus HOM05D006375 ORTHO05D008188 7.5e-204 714.9 882 48.6
MD17G1258300 Malus domestica HOM05D006375 ORTHO05D008188 2.9e-203 713.0 893 47.6
TPR.G8261 Trifolium pratense HOM05D006375 ORTHO05D008188 2.9e-203 713.0 901 46.9
RcHm_v2.0_Chr3g0493161 Rosa chinensis HOM05D006375 ORTHO05D008188 3.7e-203 712.6 873 48.5
SGA_v2.0_scaffold2G00936 Striga asiatica HOM05D006375 ORTHO05D008188 6.4e-203 711.8 869 49.0
MSTRG.2615 Avicennia marina HOM05D006375 ORTHO05D008188 8.3e-203 711.4 900 47.4
Lalb_Chr04g0251361 Lupinus albus HOM05D006375 ORTHO05D008188 1.9e-202 710.3 864 48.1
arahy.Tifrunner.gnm1.ann1.EH3TRU Arachis hypogaea HOM05D006375 ORTHO05D008188 3.2e-202 709.5 896 47.2
arahy.Tifrunner.gnm1.ann1.WVM8AG Arachis hypogaea HOM05D006375 ORTHO05D008188 5.4e-202 708.8 881 47.1
Sed0006511 Sechium edule HOM05D006375 ORTHO05D008188 5.4e-202 708.8 919 46.8
DCAR_003431 Daucus carota HOM05D006375 ORTHO05D008188 9.2e-202 708.0 899 45.9
HanXRQChr14g0444701 Helianthus annuus HOM05D006375 ORTHO05D008188 6.0e-201 705.3 868 46.2
SalBow3G0693 Salvia bowleyana HOM05D006375 ORTHO05D008188 6.0e-201 705.3 869 48.3
HPP92_024778 Vanilla planifolia HOM05D006375 ORTHO05D008188 2.3e-200 703.4 827 48.9
FvH4_1g28770 Fragaria vesca HOM05D006375 ORTHO05D008188 5.0e-200 702.2 834 49.2
CsaV3_5G024160 Cucumis sativus L. HOM05D006375 ORTHO05D008188 4.3e-199 699.1 884 46.7
GSVIVG01030782001 Vitis vinifera HOM05D006375 ORTHO05D008188 5.6e-199 698.7 822 49.3
Medtr5g078360 Medicago truncatula HOM05D006375 ORTHO05D008188 8.0e-198 694.9 866 48.3
FAN19G0463 Fragaria x ananassa HOM05D006375 ORTHO05D008188 1.5e-196 690.6 845 48.4
AUR62003604 Chenopodium quinoa HOM05D006375 ORTHO05D008188 3.4e-196 689.5 894 46.4
FAN23G0218 Fragaria x ananassa HOM05D006375 ORTHO05D008188 1.3e-195 687.6 869 47.0
Cc07_g13460 Coffea canephora HOM05D006375 ORTHO05D008188 2.9e-195 686.4 846 48.3
Phvul.008G233100 Phaseolus vulgaris HOM05D006375 ORTHO05D008188 8.3e-195 684.9 857 47.4
CiPaw.03G071800 Carya illinoinensis HOM05D006375 ORTHO05D008188 1.4e-194 684.1 882 47.2
AUR62017915 Chenopodium quinoa HOM05D006375 ORTHO05D008188 1.4e-194 684.1 862 47.1
Migut.H02262 Erythranthe guttata HOM05D006375 ORTHO05D008188 3.2e-194 682.9 752 51.6
COL.COLO4_05994 Corchorus olitorius HOM05D006375 ORTHO05D008188 7.1e-194 681.8 868 46.8
Hma1.2p1_0158F.1_g070190 Hydrangea macrophylla HOM05D006375 ORTHO05D008188 3.5e-193 679.5 746 50.9
ECA238G1164 Erigeron canadensis HOM05D006375 ORTHO05D008188 2.3e-192 676.8 880 46.0
PGR004G2253 Punica granatum HOM05D006375 ORTHO05D008188 2.5e-191 673.3 841 46.6
MELO3C022863.2 Cucumis melo HOM05D006375 ORTHO05D008188 7.3e-191 671.8 907 45.1
ClCG01G008800 Citrullus lanatus HOM05D006375 ORTHO05D008188 9.5e-191 671.4 878 46.8
Psat2g047400 Pisum sativum HOM05D006375 ORTHO05D008188 1.1e-189 667.9 865 46.4
THA.LOC104827188 Tarenaya hassleriana HOM05D006375 ORTHO05D008188 4.1e-186 656.0 866 44.8
TWI53G2003 Tripterygium wilfordii HOM05D006375 ORTHO05D008188 2.1e-185 653.7 879 44.3
Os08g0427500 Oryza sativa ssp. japonica HOM05D006375 ORTHO05D008188 1.7e-184 650.6 872 44.5
vmacro07694 Vaccinium macrocarpon HOM05D006375 ORTHO05D008188 3.0e-184 649.8 901 45.2
AL6G27600 Arabidopsis lyrata HOM05D006375 ORTHO05D008188 5.1e-184 649.0 858 45.5
BcaC03g18507 Brassica carinata HOM05D006375 ORTHO05D008188 6.6e-184 648.7 847 45.6
AT5G16630 Arabidopsis thaliana HOM05D006375 ORTHO05D008188 8.6e-184 648.3 855 45.4
Carub.0006s1484 Capsella rubella HOM05D006375 ORTHO05D008188 1.1e-183 647.9 840 46.1
Ah.02g121850 Amaranthus hybridus HOM05D006375 ORTHO05D008188 9.6e-183 644.8 859 45.9
BraA02t05338Z Brassica rapa HOM05D006375 ORTHO05D008188 1.6e-182 644.0 844 46.2
Cpa.g.sc116.55 Carica papaya HOM05D006375 ORTHO05D008188 2.1e-182 643.7 749 49.5
TWI74G0084 Tripterygium wilfordii HOM05D006375 ORTHO05D008188 4.7e-182 642.5 884 43.9
A02p03690 Brassica napus HOM05D006375 ORTHO05D008188 3.1e-181 639.8 844 45.7
CARHR196570 Cardamine hirsuta HOM05D006375 ORTHO05D008188 3.4e-180 636.3 841 44.8
C02p08510 Brassica napus HOM05D006375 ORTHO05D008188 7.6e-180 635.2 871 44.3
Thhalv10012651m.g Eutrema salsugineum HOM05D006375 ORTHO05D008188 6.4e-179 632.1 845 45.6
Aa31LG11G13020 Aethionema arabicum HOM05D006375 ORTHO05D008188 1.4e-178 630.9 882 43.4
Zm00001eb041880 Zea mays HOM05D006375 ORTHO05D008188 9.3e-178 628.2 856 43.7
MBI19_g34823_MAGBIO Magnolia biondii HOM05D006375 ORTHO05D008188 3.5e-177 626.3 605 55.0
Prupe.3G161000 Prunus persica HOM05D006375 ORTHO05D008188 1.3e-176 624.4 866 44.1
CSS0009955 Camellia sinensis var. sinensis HOM05D006375 ORTHO05D008188 5.1e-176 622.5 722 49.9
CAN.G222.25 Capsicum annuum HOM05D006375 ORTHO05D008188 1.3e-174 617.8 860 44.2
BolC2t06767H Brassica oleracea HOM05D006375 ORTHO05D000255 3.6e-174 616.3 893 42.6
Sp6g27540 Schrenkiella parvula HOM05D006375 ORTHO05D008188 4.0e-173 612.8 862 44.0
SEGI_37856 Sequoiadendron giganteum HOM05D006375 ORTHO05D008188 9.3e-170 601.7 933 41.3
Peaxi162Scf00305g00616 Petunia axillaris HOM05D006375 ORTHO05D008188 3.2e-162 576.6 687 48.3
Lsat_1_v5_gn_2_69340 Lactuca sativa HOM05D006375 ORTHO05D008188 5.4e-162 575.9 862 42.3
Eucgr.F02852 Eucalyptus grandis HOM05D006375 ORTHO05D008188 4.6e-161 572.8 581 52.8
Phvul.010G024866 Phaseolus vulgaris HOM05D006375 ORTHO05D008188 1.1e-157 561.6 721 46.7
unitig_899.g14571 Utricularia gibba HOM05D006375 ORTHO05D008188 1.0e-155 555.1 834 43.4
Dinv28205 Davidia involucrata HOM05D006375 ORTHO05D008188 7.6e-148 528.9 715 44.9
SMO139G0070 Selaginella moellendorffii HOM05D006375 ORTHO05D008188 2.3e-144 517.3 835 38.6
SMO157G0011 Selaginella moellendorffii HOM05D006375 ORTHO05D008188 8.2e-142 508.8 845 38.0
Pp3c22_7360 Physcomitrium patens HOM05D006375 ORTHO05D008188 3.0e-136 490.3 930 35.1
SHI25352 Sapria himalayana HOM05D006375 ORTHO05D008188 6.7e-136 489.2 685 44.2
Mapoly0069s0010 Marchantia polymorpha HOM05D006375 ORTHO05D008188 2.2e-134 484.2 962 34.9
AagrBONN_evm.TU.Sc2ySwM_340.97 Anthoceros agrestis HOM05D006375 ORTHO05D008188 2.1e-129 467.6 805 37.6
FAN26G3226 Fragaria x ananassa HOM05D006375 ORTHO05D008188 1.4e-104 385.2 474 46.6
CBR_g3816 Chara braunii HOM05D006375 ORTHO05D008188 1.2e-100 372.1 1062 29.4
Ca_22495_v3 Cicer arietinum L. HOM05D006375 ORTHO05D008188 1.9e-82 311.6 344 49.4
Ca_22493_v3 Cicer arietinum L. HOM05D006375 ORTHO05D008188 6.0e-52 210.3 832 26.1
PRCOL_00001710 Prasinoderma coloniale HOM05D006375 ORTHO05D008188 2.8e-49 201.4 908 23.7
MCO12G035 Micromonas commoda HOM05D006375 ORTHO05D008188 1.5e-39 169.1 427 29.3
Peaxi162Scf00305g00615 Petunia axillaris HOM05D006375 ORTHO05D008188 6.5e-38 163.7 169 52.1
Haze_27154 Corylus avellana HOM05D006375 ORTHO05D008188 4.6e-36 157.5 226 42.0
Nn2g13217 Nelumbo nucifera HOM05D006375 ORTHO05D008188 5.1e-27 127.5 136 51.5
Cre12.g557400 Chlamydomonas reinhardtii HOM05D006375 ORTHO05D008188 4.1e-24 117.9 311 28.6
Cfa025272 Carpinus fangiana HOM05D006375 ORTHO05D008188 1.8e-19 102.4 246 26.4
Cfa024716 Carpinus fangiana HOM05D006375 ORTHO05D008188 3.9e-19 101.3 185 29.7
CAN.G222.26 Capsicum annuum HOM05D006375 ORTHO05D008188 1.4e-16 92.8 123 44.7
FAN26G2035 Fragaria x ananassa HOM05D006375 ORTHO05D008188 1.3e-14 86.3 86 52.3
SHI25356 Sapria himalayana HOM05D006375 ORTHO05D008188 6.7e-11 73.9 86 51.2
COL.COLO4_05996 Corchorus olitorius HOM05D006375 ORTHO05D000012 8.2e-09 67.0 105 38.1


User provided reference genes

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