Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G2680 Ceratophyllum demersum HOM05D006124 ORTHO05D007854 4.4e-253 877.5 448 100.0
MBI18_g17017_MAGBIO Magnolia biondii HOM05D006124 ORTHO05D007854 4.1e-166 588.6 341 83.0
Nn7g36111 Nelumbo nucifera HOM05D006124 ORTHO05D007854 5.0e-164 581.6 339 82.9
GSVIVG01025154001 Vitis vinifera HOM05D006124 ORTHO05D007854 5.0e-164 581.6 358 81.6
CSS0017090 Camellia sinensis var. sinensis HOM05D006124 ORTHO05D007854 1.2e-162 577.0 342 81.0
Dinv30520 Davidia involucrata HOM05D006124 ORTHO05D007854 1.1e-161 573.9 339 81.1
Rhsim08G0043400 Rhododendron simsii HOM05D006124 ORTHO05D007854 2.3e-161 572.8 333 82.9
Hma1.2p1_0002F.1_g001970 Hydrangea macrophylla HOM05D006124 ORTHO05D007854 5.2e-161 571.6 341 80.1
vmacro03179 Vaccinium macrocarpon HOM05D006124 ORTHO05D007854 6.8e-161 571.2 328 82.6
QL01p023235 Quercus lobata HOM05D006124 ORTHO05D007854 2.0e-160 569.7 337 80.4
Actinidia07118 Actinidia chinensis HOM05D006124 ORTHO05D007854 9.8e-160 567.4 328 82.0
Cc01_g01430 Coffea canephora HOM05D006124 ORTHO05D007854 2.2e-159 566.2 337 80.7
Cfa012640 Carpinus fangiana HOM05D006124 ORTHO05D007854 1.1e-158 563.9 337 80.4
DCAR_015555 Daucus carota HOM05D006124 ORTHO05D007854 1.1e-158 563.9 335 80.3
Aqoxy5G00340 Aquilegia oxysepala HOM05D006124 ORTHO05D007854 3.2e-158 562.4 354 77.4
EL10Ac5g12347 Beta vulgaris HOM05D006124 ORTHO05D007854 3.2e-158 562.4 325 82.2
HanXRQChr02g0055911 Helianthus annuus HOM05D006124 ORTHO05D007854 3.2e-158 562.4 331 81.3
COL.COLO4_05187 Corchorus olitorius HOM05D006124 ORTHO05D007854 4.6e-157 558.5 335 80.0
AUR62018404 Chenopodium quinoa HOM05D006124 ORTHO05D007854 6.0e-157 558.1 324 82.1
AUR62021039 Chenopodium quinoa HOM05D006124 ORTHO05D007854 7.8e-157 557.8 324 81.8
Lsat_1_v5_gn_6_46340 Lactuca sativa HOM05D006124 ORTHO05D007854 1.0e-156 557.4 367 76.0
CiPaw.13G108300 Carya illinoinensis HOM05D006124 ORTHO05D007854 1.3e-156 557.0 337 78.6
ClCG01G004970 Citrullus lanatus HOM05D006124 ORTHO05D007854 1.3e-156 557.0 339 77.6
Peaxi162Scf00876g00022 Petunia axillaris HOM05D006124 ORTHO05D007854 1.3e-156 557.0 329 81.8
Eucgr.J00945 Eucalyptus grandis HOM05D006124 ORTHO05D007854 1.7e-156 556.6 343 79.3
Haze_08019 Corylus avellana HOM05D006124 ORTHO05D007854 2.3e-156 556.2 344 78.8
CANSAT54G1697 Cannabis sativa HOM05D006124 ORTHO05D007854 3.9e-156 555.4 339 77.3
Lalb_Chr22g0357551 Lupinus albus HOM05D006124 ORTHO05D007854 3.9e-156 555.4 325 80.3
Duzib150G0641 Durio zibethinus HOM05D006124 ORTHO05D007854 5.1e-156 555.1 329 81.8
Lj1g0025688 Lotus japonicus HOM05D006124 ORTHO05D007854 5.1e-156 555.1 335 77.6
Thecc.09G259100 Theobroma cacao HOM05D006124 ORTHO05D007854 6.6e-156 554.7 328 81.4
Cpa.g.sc139.77 Carica papaya HOM05D006124 ORTHO05D007854 8.6e-156 554.3 330 80.3
Glyma.19G129000 Glycine max HOM05D006124 ORTHO05D007854 1.1e-155 553.9 328 78.7
Oeu035057.1 Olea europaea HOM05D006124 ORTHO05D007854 1.1e-155 553.9 358 75.4
MD03G1112800 Malus domestica HOM05D006124 ORTHO05D007854 1.9e-155 553.1 325 80.3
Nitab4.5_0000214g0090 Nicotiana tabacum HOM05D006124 ORTHO05D007854 1.9e-155 553.1 329 80.2
Prupe.6G097100 Prunus persica HOM05D006124 ORTHO05D007854 1.9e-155 553.1 329 79.9
PSO384G4530 Papaver somniferum HOM05D006124 ORTHO05D007854 2.5e-155 552.7 331 79.2
Glyma.11G073900 Glycine max HOM05D006124 ORTHO05D007854 3.3e-155 552.4 328 78.4
SalBow3G1513 Salvia bowleyana HOM05D006124 ORTHO05D007854 3.3e-155 552.4 371 74.9
PSO541G0641 Papaver somniferum HOM05D006124 ORTHO05D007854 4.3e-155 552.0 341 78.0
MELO3C005421.2 Cucumis melo HOM05D006124 ORTHO05D007854 5.6e-155 551.6 342 76.0
CsaV3_5G005370 Cucumis sativus L. HOM05D006124 ORTHO05D007854 5.6e-155 551.6 342 75.7
Gohir.A09G106200 Gossypium hirsutum HOM05D006124 ORTHO05D007854 5.6e-155 551.6 329 79.3
Gorai.006G120700 Gossypium raimondii HOM05D006124 ORTHO05D007854 5.6e-155 551.6 329 79.3
MSTRG.21138 Avicennia marina HOM05D006124 ORTHO05D007854 9.5e-155 550.8 331 78.5
Ciclev10005033m.g Citrus clementina HOM05D006124 ORTHO05D007854 9.5e-155 550.8 355 74.6
ECA233G1948 Erigeron canadensis HOM05D006124 ORTHO05D007854 9.5e-155 550.8 338 78.4
arahy.Tifrunner.gnm1.ann1.63AZS3 Arachis hypogaea HOM05D006124 ORTHO05D007854 1.2e-154 550.4 328 79.0
Peaxi162Scf00272g00827 Petunia axillaris HOM05D006124 ORTHO05D007854 1.2e-154 550.4 329 80.9
FAN25G1144 Fragaria x ananassa HOM05D006124 ORTHO05D007854 1.6e-154 550.1 337 78.3
Manes.04G024500 Manihot esculenta HOM05D006124 ORTHO05D007854 1.6e-154 550.1 335 78.8
Ciclev10011800m.g Citrus clementina HOM05D006124 ORTHO05D007854 2.1e-154 549.7 330 78.8
Gohir.D09G102900 Gossypium hirsutum HOM05D006124 ORTHO05D007854 2.1e-154 549.7 329 79.0
PSO339G3674 Papaver somniferum HOM05D006124 ORTHO05D007854 2.1e-154 549.7 331 79.2
RcHm_v2.0_Chr5g0060301 Rosa chinensis HOM05D006124 ORTHO05D007854 2.1e-154 549.7 339 77.9
Medtr7g089440 Medicago truncatula HOM05D006124 ORTHO05D007854 2.8e-154 549.3 344 75.9
arahy.Tifrunner.gnm1.ann1.M1WJK6 Arachis hypogaea HOM05D006124 ORTHO05D007854 3.6e-154 548.9 328 78.7
TPR.G16093 Trifolium pratense HOM05D006124 ORTHO05D007854 3.6e-154 548.9 328 79.0
VMungo1383G3228 Vigna mungo HOM05D006124 ORTHO05D007854 3.6e-154 548.9 328 78.0
Ca_08379_v3 Cicer arietinum L. HOM05D006124 ORTHO05D007854 4.7e-154 548.5 342 76.6
Solyc04g054700.3 Solanum lycopersicum HOM05D006124 ORTHO05D007854 4.7e-154 548.5 326 80.1
Atru.chr3.3681 Acer truncatum HOM05D006124 ORTHO05D007854 6.2e-154 548.1 327 79.2
Sed0018571 Sechium edule HOM05D006124 ORTHO05D007854 6.2e-154 548.1 339 76.7
PGR119G0371 Punica granatum HOM05D006124 ORTHO05D007854 8.1e-154 547.7 408 69.1
TWI39G0794 Tripterygium wilfordii HOM05D006124 ORTHO05D007854 1.1e-153 547.4 326 79.8
CAN.G219.5 Capsicum annuum HOM05D006124 ORTHO05D007854 1.4e-153 547.0 329 79.3
FvH4_3g32970 Fragaria vesca HOM05D006124 ORTHO05D007854 1.8e-153 546.6 337 77.7
FAN21G3497 Fragaria x ananassa HOM05D006124 ORTHO05D007854 2.3e-153 546.2 337 78.0
FAN11G0357 Fragaria x ananassa HOM05D006124 ORTHO05D007854 4.0e-153 545.4 337 77.4
Lalb_Chr14g0365721 Lupinus albus HOM05D006124 ORTHO05D007854 5.2e-153 545.0 325 78.2
Migut.D02195 Erythranthe guttata HOM05D006124 ORTHO05D007854 5.8e-152 541.6 363 72.2
THA.LOC104801004 Tarenaya hassleriana HOM05D006124 ORTHO05D007854 9.9e-152 540.8 340 76.8
Nitab4.5_0004386g0010 Nicotiana tabacum HOM05D006124 ORTHO05D007854 8.3e-151 537.7 329 78.7
Os04g0508900 Oryza sativa ssp. japonica HOM05D006124 ORTHO05D007854 1.9e-150 536.6 334 76.6
Zm00001eb077790 Zea mays HOM05D006124 ORTHO05D007854 3.2e-150 535.8 330 78.8
Sabra04G0071700 Salix brachista HOM05D006124 ORTHO05D007854 1.2e-149 533.9 325 79.4
Aa31LG1G19730 Aethionema arabicum HOM05D006124 ORTHO05D007854 6.0e-149 531.6 335 75.8
Potri.004G113700 Populus trichocarpa HOM05D006124 ORTHO05D007854 6.0e-149 531.6 324 79.6
Sp1g03920 Schrenkiella parvula HOM05D006124 ORTHO05D007854 1.5e-147 526.9 356 71.6
Thhalv10007730m.g Eutrema salsugineum HOM05D006124 ORTHO05D007854 2.5e-147 526.2 359 71.6
AL1G14800 Arabidopsis lyrata HOM05D006124 ORTHO05D007854 3.3e-147 525.8 330 74.8
AT1G05055 Arabidopsis thaliana HOM05D006124 ORTHO05D007854 3.3e-147 525.8 330 74.8
BcaB03g13459 Brassica carinata HOM05D006124 ORTHO05D007854 7.3e-147 524.6 354 71.5
C08p01730 Brassica napus HOM05D006124 ORTHO05D007854 7.3e-147 524.6 354 71.5
BolC8t46973H Brassica oleracea HOM05D006124 ORTHO05D007854 7.3e-147 524.6 354 71.5
A08p36590 Brassica napus HOM05D006124 ORTHO05D007854 1.2e-146 523.9 351 71.8
BraA08t35561Z Brassica rapa HOM05D006124 ORTHO05D007854 1.2e-146 523.9 351 71.8
CARHR004500 Cardamine hirsuta HOM05D006124 ORTHO05D007854 4.7e-146 521.9 330 74.5
CiPaw.05G171100 Carya illinoinensis HOM05D006124 ORTHO05D007854 4.7e-146 521.9 324 77.5
SEGI_32950 Sequoiadendron giganteum HOM05D006124 ORTHO05D007854 1.5e-144 516.9 339 71.7
SGA_v2.0_scaffold61G21160 Striga asiatica HOM05D006124 ORTHO05D007854 1.5e-144 516.9 344 72.7
Carub.0001s0430 Capsella rubella HOM05D006124 ORTHO05D007854 4.4e-144 515.4 351 70.7
unitig_21.g20322 Utricularia gibba HOM05D006124 ORTHO05D007854 1.4e-142 510.4 341 71.8
Peaxi162Scf00106g02220 Petunia axillaris HOM05D006124 ORTHO05D007854 4.4e-136 488.8 370 68.4
Mapoly0005s0033 Marchantia polymorpha HOM05D006124 ORTHO05D007854 1.0e-132 477.6 330 68.5
TAR369G0666 Trochodendron aralioides HOM05D006124 ORTHO05D007854 1.3e-130 470.7 260 84.6
Lj1C682G4 Lonicera japonica HOM05D006124 ORTHO05D007854 1.4e-126 457.2 263 82.9
Pp3c24_6530 Physcomitrium patens HOM05D006124 ORTHO05D007854 1.4e-126 457.2 322 65.2
Ah.13g077240 Amaranthus hybridus HOM05D006124 ORTHO05D007854 7.9e-125 451.4 250 83.2
CBR_g21234 Chara braunii HOM05D006124 ORTHO05D007854 1.8e-124 450.3 327 64.5
Sc06g0010480 Simmondsia chinensis HOM05D006124 ORTHO05D007854 4.8e-122 442.2 249 82.7
SMO141G0040 Selaginella moellendorffii HOM05D006124 ORTHO05D007854 8.1e-122 441.4 321 62.9
Sopen04g024450 Solanum pennellii HOM05D006124 ORTHO05D007854 8.1e-122 441.4 250 82.8
Peaxi162Scf00876g00023 Petunia axillaris HOM05D006124 ORTHO05D007854 3.1e-121 439.5 269 79.9
Phvul.001G121400 Phaseolus vulgaris HOM05D006124 ORTHO05D007854 2.9e-119 433.0 243 81.5
ATR0580G285 Amborella trichopoda HOM05D006124 ORTHO05D007854 6.0e-117 425.2 263 76.0
Psat3g079640 Pisum sativum HOM05D006124 ORTHO05D007854 5.1e-116 422.2 255 77.3
MD11G1132000 Malus domestica HOM05D006124 ORTHO05D007854 2.6e-112 409.8 270 71.1
AagrBONN_evm.TU.Sc2ySwM_344.4431 Anthoceros agrestis HOM05D006124 ORTHO05D007854 1.5e-99 367.5 243 65.8
PGSC0003DMG401027913 Solanum tuberosum HOM05D006124 ORTHO05D007854 4.5e-96 355.9 226 76.5
CAN.G1136.1 Capsicum annuum HOM05D006124 ORTHO05D007854 1.2e-93 347.8 220 74.5
Cre03.g179550 Chlamydomonas reinhardtii HOM05D006124 ORTHO05D007854 1.5e-91 340.9 362 48.1
Solyc08g028693.1 Solanum lycopersicum HOM05D006124 ORTHO05D007854 4.4e-83 312.8 183 80.9
MCO11G183 Micromonas commoda HOM05D006124 ORTHO05D007854 7.7e-80 302.0 338 46.7
BolC5t29103H Brassica oleracea HOM05D006124 ORTHO05D007854 8.0e-69 265.4 214 64.5
Haze_26481 Corylus avellana HOM05D006124 ORTHO05D007854 1.0e-68 265.0 326 42.3
PRCOL_00001395 Prasinoderma coloniale HOM05D006124 ORTHO05D007854 2.8e-61 240.4 276 43.5
Cfa026643 Carpinus fangiana HOM05D006124 ORTHO05D007854 7.5e-59 232.3 339 39.5
Lj1A187G25 Lonicera japonica HOM05D006124 ORTHO05D007854 6.8e-52 209.1 123 80.5
HPP92_015146 Vanilla planifolia HOM05D006124 ORTHO05D007854 2.4e-25 120.9 68 75.0
Psat6g235520 Pisum sativum HOM05D006124 ORTHO05D001516 4.3e-22 110.2 74 66.2
Peaxi162Scf00876g00016 Petunia axillaris HOM05D006124 ORTHO05D007854 1.1e-20 105.5 72 70.8
BcaC09g51580 Brassica carinata HOM05D006124 ORTHO05D007854 5.8e-19 99.8 95 55.8
ECA247G2464 Erigeron canadensis HOM05D011992 ORTHO05D008321 5.6e-14 83.2 88 53.4
HPP92_015147 Vanilla planifolia HOM05D006124 ORTHO05D007854 4.8e-13 80.1 59 66.1
ClCG03G002310 Citrullus lanatus HOM05D006124 ORTHO05D150439 4.5e-11 73.6 67 52.2
RcHm_v2.0_Chr5g0060231 Rosa chinensis HOM05D006124 ORTHO05D007854 4.9e-10 70.1 61 57.4
ECA233G1860 Erigeron canadensis HOM05D000013 ORTHO05D000011 5.1e-07 60.1 88 42.0


User provided reference genes

Program Settings