Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G3804 Ceratophyllum demersum HOM05D005626 ORTHO05D007372 8.4e-218 760.4 476 100.0
MBI07_g24765_MAGBIO Magnolia biondii HOM05D005626 ORTHO05D007372 2.5e-137 493.0 479 67.0
Atru.chr12.2245_Atru.chr12.2244 Acer truncatum HOM05D005626 ORTHO05D007372 1.3e-122 444.1 468 62.0
Manes.06G012351 Manihot esculenta HOM05D005626 ORTHO05D007372 1.5e-121 440.7 468 61.1
CANSAT21G0821 Cannabis sativa HOM05D005626 ORTHO05D007372 7.3e-113 411.8 465 56.1
Migut.F00199 Erythranthe guttata HOM05D005626 ORTHO05D007372 7.3e-113 411.8 466 57.1
Cc02_g01370 Coffea canephora HOM05D005626 ORTHO05D007372 1.8e-106 390.6 465 50.5
GSVIVG01038569001 Vitis vinifera HOM05D005626 ORTHO05D007372 1.5e-105 387.5 466 59.0
Oeu010695.1 Olea europaea HOM05D005626 ORTHO05D007372 3.7e-104 382.9 457 57.5
Nitab4.5_0005491g0050 Nicotiana tabacum HOM05D005626 ORTHO05D007372 8.1e-104 381.7 464 55.8
Sopen03g022800 Solanum pennellii HOM05D005626 ORTHO05D007372 1.8e-103 380.6 463 55.5
Solyc03g082990.3 Solanum lycopersicum HOM05D005626 ORTHO05D007372 2.4e-103 380.2 463 55.5
CAN.G481.28 Capsicum annuum HOM05D005626 ORTHO05D007372 4.5e-102 375.9 463 54.2
Cfa016215 Carpinus fangiana HOM05D005626 ORTHO05D007372 4.5e-102 375.9 465 54.4
EL10Ac3g05260 Beta vulgaris HOM05D005626 ORTHO05D007372 5.8e-102 375.6 467 54.6
Eucgr.A01448 Eucalyptus grandis HOM05D005626 ORTHO05D007372 6.4e-101 372.1 466 54.5
Dinv29256 Davidia involucrata HOM05D005626 ORTHO05D007372 2.4e-100 370.2 471 56.5
Peaxi162Scf00740g00226 Petunia axillaris HOM05D005626 ORTHO05D007372 2.1e-99 367.1 467 53.7
Potri.015G010800 Populus trichocarpa HOM05D005626 ORTHO05D007372 7.9e-99 365.2 469 57.6
TAR375G0360 Trochodendron aralioides HOM05D005626 ORTHO05D007372 1.3e-96 357.8 471 55.4
unitig_92.g28249 Utricularia gibba HOM05D005626 ORTHO05D007372 1.3e-96 357.8 468 54.3
Sabra15G0008900 Salix brachista HOM05D005626 ORTHO05D007372 3.7e-96 356.3 471 56.9
Gohir.D09G179900 Gossypium hirsutum HOM05D005626 ORTHO05D007372 2.6e-94 350.1 471 53.1
AUR62006074 Chenopodium quinoa HOM05D005626 ORTHO05D007372 5.8e-94 349.0 461 54.0
Gorai.006G201900 Gossypium raimondii HOM05D005626 ORTHO05D007372 1.3e-93 347.8 503 53.5
MBI07_g43862_MAGBIO Magnolia biondii HOM05D005626 ORTHO05D007372 1.4e-92 344.4 457 46.2
QL09p007984 Quercus lobata HOM05D005626 ORTHO05D007372 1.4e-92 344.4 468 55.6
Actinidia18659 Actinidia chinensis HOM05D005626 ORTHO05D007372 1.9e-92 344.0 469 51.6
Prupe.2G313200 Prunus persica HOM05D005626 ORTHO05D007372 1.9e-92 344.0 471 52.0
CsaV3_5G000430 Cucumis sativus L. HOM05D005626 ORTHO05D007372 3.2e-92 343.2 469 55.9
THA.LOC104799967 Tarenaya hassleriana HOM05D005626 ORTHO05D007372 5.5e-92 342.4 467 50.7
ClCG01G000360 Citrullus lanatus HOM05D005626 ORTHO05D007372 9.3e-92 341.7 471 55.8
arahy.Tifrunner.gnm1.ann1.ULB6CG Arachis hypogaea HOM05D005626 ORTHO05D007372 2.7e-91 340.1 471 51.0
Thecc.03G201200 Theobroma cacao HOM05D005626 ORTHO05D007372 6.7e-90 335.5 471 52.9
PSO063G0511 Papaver somniferum HOM05D005626 ORTHO05D007372 1.9e-89 334.0 416 57.9
Ciclev10020013m.g Citrus clementina HOM05D005626 ORTHO05D007372 1.3e-88 331.3 468 51.1
HPP92_005288 Vanilla planifolia HOM05D005626 ORTHO05D007372 1.3e-88 331.3 392 57.1
MELO3C005892.2 Cucumis melo HOM05D005626 ORTHO05D007372 1.6e-88 330.9 469 55.7
PSO170G4344 Papaver somniferum HOM05D005626 ORTHO05D007372 1.6e-88 330.9 467 55.9
Nn1g00302 Nelumbo nucifera HOM05D005626 ORTHO05D007372 4.8e-88 329.3 470 53.2
Lj8A623T21 Lonicera japonica HOM05D005626 ORTHO05D007372 1.1e-87 328.2 459 55.3
PGR042G1168 Punica granatum HOM05D005626 ORTHO05D007372 1.5e-86 324.3 466 54.3
CSS0044766 Camellia sinensis var. sinensis HOM05D005626 ORTHO05D007372 4.5e-86 322.8 464 51.1
CSS0003989 Camellia sinensis var. sinensis HOM05D005626 ORTHO05D007372 5.9e-86 322.4 530 41.5
arahy.Tifrunner.gnm1.ann1.DCMH6Q Arachis hypogaea HOM05D005626 ORTHO05D007372 7.6e-86 322.0 454 53.1
FAN10G2571 Fragaria x ananassa HOM05D005626 ORTHO05D007372 2.2e-85 320.5 467 52.7
arahy.Tifrunner.gnm1.ann1.1DU7LF Arachis hypogaea HOM05D005626 ORTHO05D007372 6.5e-85 318.9 478 47.5
Manes.06G011400 Manihot esculenta HOM05D005626 ORTHO05D007372 6.5e-85 318.9 385 58.7
SalBow4G1489 Salvia bowleyana HOM05D005626 ORTHO05D007372 5.5e-84 315.8 417 47.0
arahy.Tifrunner.gnm1.ann1.CHU3M4 Arachis hypogaea HOM05D005626 ORTHO05D007372 7.2e-84 315.5 471 51.8
FAN03G2656 Fragaria x ananassa HOM05D005626 ORTHO05D007032 1.2e-83 314.7 482 49.2
AUR62035551 Chenopodium quinoa HOM05D005626 ORTHO05D007372 3.6e-83 313.2 482 42.1
FAN06G4319 Fragaria x ananassa HOM05D005626 ORTHO05D007372 3.6e-83 313.2 467 51.4
FvH4_7g31990 Fragaria vesca HOM05D005626 ORTHO05D007372 2.3e-82 310.5 467 51.2
Aqoxy5G04311 Aquilegia oxysepala HOM05D005626 ORTHO05D007372 3.9e-82 309.7 468 51.9
CiPaw.06G045100 Carya illinoinensis HOM05D005626 ORTHO05D007372 1.1e-81 308.1 468 49.8
Ah.07g205460 Amaranthus hybridus HOM05D005626 ORTHO05D007372 1.9e-81 307.4 506 47.2
TWI39G0896 Tripterygium wilfordii HOM05D005626 ORTHO05D007372 2.5e-81 307.0 466 51.9
Hund11648 Selenicereus undatus HOM05D005626 ORTHO05D007372 9.7e-81 305.1 468 45.9
MD01G1222800 Malus domestica HOM05D005626 ORTHO05D007372 1.3e-80 304.7 471 47.6
Sc25g0000940 Simmondsia chinensis HOM05D005626 ORTHO05D007372 1.3e-80 304.7 424 51.9
TPR.G33639 Trifolium pratense HOM05D005626 ORTHO05D007372 1.1e-79 301.6 465 49.9
Lalb_Chr08g0240121 Lupinus albus HOM05D005626 ORTHO05D007372 3.1e-79 300.1 467 48.6
RcHm_v2.0_Chr1g0381501 Rosa chinensis HOM05D005626 ORTHO05D007372 6.9e-79 298.9 467 50.3
CSS0000100 Camellia sinensis var. sinensis HOM05D005626 ORTHO05D007372 3.4e-78 296.6 483 42.0
Haze_00226 Corylus avellana HOM05D005626 ORTHO05D007372 5.9e-78 295.8 353 57.8
QL09p008055 Quercus lobata HOM05D005626 ORTHO05D007372 5.9e-78 295.8 431 41.1
Hma1.2p1_2307F.1_g319430 Hydrangea macrophylla HOM05D005626 ORTHO05D007372 5.0e-77 292.7 467 49.9
MSTRG.27018 Avicennia marina HOM05D005626 ORTHO05D007372 8.5e-77 292.0 450 47.1
BcaB05g22010 Brassica carinata HOM05D005626 ORTHO05D007372 2.5e-76 290.4 487 37.6
Sed0007830 Sechium edule HOM05D005626 ORTHO05D007372 7.9e-75 285.4 470 50.6
Hma1.2p1_0591F.1_g185250 Hydrangea macrophylla HOM05D005626 ORTHO05D007372 1.0e-74 285.0 467 49.3
DCAR_010593 Daucus carota HOM05D005626 ORTHO05D007372 3.9e-74 283.1 245 60.8
Duzib084G0104 Durio zibethinus HOM05D005626 ORTHO05D007372 6.7e-74 282.3 467 47.5
Lj1g0019302 Lotus japonicus HOM05D005626 ORTHO05D007372 1.3e-72 278.1 472 43.0
AT5G53080 Arabidopsis thaliana HOM05D005626 ORTHO05D007372 9.1e-71 271.9 467 45.8
Carub.0008s1328 Capsella rubella HOM05D005626 ORTHO05D007372 1.0e-69 268.5 467 46.7
Cpa.g.sc3.101 Carica papaya HOM05D005626 ORTHO05D007372 2.2e-69 267.3 471 44.4
Aa31LG3G9390 Aethionema arabicum HOM05D005626 ORTHO05D007372 3.8e-69 266.5 467 45.0
COL.COLO4_16792 Corchorus olitorius HOM05D005626 ORTHO05D007032 1.4e-68 264.6 449 46.8
Thhalv10013148m.g Eutrema salsugineum HOM05D005626 ORTHO05D007372 1.4e-68 264.6 467 46.7
Psat5g076080 Pisum sativum HOM05D005626 ORTHO05D007372 1.9e-68 264.2 468 46.4
A02p11310 Brassica napus HOM05D005626 ORTHO05D007372 7.2e-68 262.3 467 46.9
Lsat_1_v5_gn_9_49841 Lactuca sativa HOM05D005626 ORTHO05D007372 9.4e-68 261.9 470 43.8
BraA02t06193Z Brassica rapa HOM05D005626 ORTHO05D007372 1.6e-67 261.2 467 46.9
AL8G27710 Arabidopsis lyrata HOM05D005626 ORTHO05D007372 2.7e-67 260.4 467 46.0
CARHR266100 Cardamine hirsuta HOM05D005626 ORTHO05D007372 2.7e-67 260.4 467 45.8
Sp6g15250 Schrenkiella parvula HOM05D005626 ORTHO05D007372 7.9e-67 258.8 465 46.2
C02p18690 Brassica napus HOM05D005626 ORTHO05D007372 2.3e-66 257.3 466 45.5
BolC2t08014H Brassica oleracea HOM05D005626 ORTHO05D007372 2.3e-66 257.3 466 45.5
Glyma.04G234300 Glycine max HOM05D005626 ORTHO05D007372 2.3e-66 257.3 467 45.8
BcaC03g14458 Brassica carinata HOM05D005626 ORTHO05D007372 1.1e-65 255.0 463 46.4
ECA232G0910 Erigeron canadensis HOM05D005626 ORTHO05D007372 4.4e-65 253.1 467 45.2
Ca_16720_v3 Cicer arietinum L. HOM05D005626 ORTHO05D007372 2.8e-64 250.4 469 45.4
HanXRQChr15g0485681 Helianthus annuus HOM05D005626 ORTHO05D007372 4.8e-64 249.6 467 47.5
ATR0730G125 Amborella trichopoda HOM05D005626 ORTHO05D007372 1.1e-63 248.4 328 60.1
VMungo1309G2515 Vigna mungo HOM05D005626 ORTHO05D007372 1.8e-63 247.7 412 45.1
Phvul.009G051300 Phaseolus vulgaris HOM05D005626 ORTHO05D007372 7.7e-62 242.3 463 44.1
Gohir.A09G185000 Gossypium hirsutum HOM05D005626 ORTHO05D007372 6.5e-61 239.2 300 59.3
PGSC0003DMG400018528 Solanum tuberosum HOM05D005626 ORTHO05D007372 5.2e-58 229.6 206 65.5
Medtr3g091780 Medicago truncatula HOM05D005626 ORTHO05D007372 3.3e-57 226.9 464 42.7
BcaB05g22007 Brassica carinata HOM05D005626 ORTHO05D007372 5.7e-57 226.1 489 35.2
FAN10G0040 Fragaria x ananassa HOM05D005626 ORTHO05D009683 2.0e-54 217.6 396 46.0
SGA_v2.0_scaffold192G40528 Striga asiatica HOM05D005626 ORTHO05D007032 1.5e-49 201.4 440 39.5
Mapoly0001s0084 Marchantia polymorpha HOM05D005626 ORTHO05D007372 4.4e-49 199.9 456 36.2
Lj1A1021T49 Lonicera japonica HOM05D005626 ORTHO05D007372 1.0e-45 188.7 199 59.3
Mapoly0045s0029 Marchantia polymorpha HOM05D005626 ORTHO05D007372 2.8e-40 170.6 340 42.6
Manes.06G012101 Manihot esculenta HOM05D005626 ORTHO05D007372 4.1e-39 166.8 234 59.4
MBI19_g14786_MAGBIO Magnolia biondii HOM05D005626 ORTHO05D007372 2.0e-33 147.9 123 59.3
MBI19_g14787_MAGBIO Magnolia biondii HOM05D005626 ORTHO05D007372 9.8e-33 145.6 96 72.9
Pp3c5_16230 Physcomitrium patens HOM05D005626 ORTHO05D007372 4.1e-31 140.2 330 30.0
Glyma.06G130267 Glycine max HOM05D005626 ORTHO05D007372 1.2e-30 138.7 109 63.3
Manes.06G011750 Manihot esculenta HOM05D005626 ORTHO05D007372 4.6e-30 136.7 202 55.9
QL09p008133 Quercus lobata HOM05D005626 ORTHO05D007372 2.9e-24 117.5 82 69.5
Glyma.06G130333 Glycine max HOM05D005626 ORTHO05D007372 3.7e-24 117.1 114 48.2
BcaB01g04215 Brassica carinata HOM05D005626 ORTHO05D007372 1.4e-23 115.2 149 43.0
BcaB01g04214 Brassica carinata HOM05D005626 ORTHO05D007372 5.0e-21 106.7 154 44.2
Pp3c16_9300 Physcomitrium patens HOM05D005626 ORTHO05D007372 1.9e-20 104.8 355 24.5
MD07G1293400 Malus domestica HOM05D005626 ORTHO05D007372 7.3e-20 102.8 119 52.9
FAN10G4199 Fragaria x ananassa HOM05D005626 ORTHO05D007372 2.1e-19 101.3 119 59.7
CSS0006573 Camellia sinensis var. sinensis HOM05D005626 ORTHO05D007372 2.0e-17 94.7 85 57.6
AagrBONN_evm.TU.Sc2ySwM_369.443 Anthoceros agrestis HOM05D005626 ORTHO05D007372 9.9e-17 92.4 392 32.7
SEGI_36936 Sequoiadendron giganteum HOM05D005626 ORTHO05D007372 1.3e-16 92.0 189 31.2
Pp3c23_14930 Physcomitrium patens HOM05D005626 ORTHO05D007372 4.1e-15 87.0 137 36.5
Pp3c5_16240 Physcomitrium patens HOM05D005626 ORTHO05D007372 3.5e-14 84.0 311 32.8
Lj1C1019T10 Lonicera japonica HOM05D005626 ORTHO05D007372 1.3e-13 82.0 78 56.4
Pp3c8_12740 Physcomitrium patens HOM05D005626 ORTHO05D007372 9.5e-12 75.9 130 31.5
QL09p008114 Quercus lobata HOM05D005626 ORTHO05D007372 8.1e-11 72.8 52 69.2
Actinidia06140 Actinidia chinensis HOM05D005626 ORTHO05D007372 1.8e-10 71.6 60 60.0
Cfa019813 Carpinus fangiana HOM05D005626 ORTHO05D007372 1.8e-10 71.6 59 61.0
MD07G1293500 Malus domestica HOM05D005626 ORTHO05D007372 1.9e-07 61.6 51 49.0
Lj1A1021T50 Lonicera japonica HOM05D005626 ORTHO05D007372 1.2e-06 58.9 48 62.5


User provided reference genes

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