Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G3060 Ceratophyllum demersum HOM05D003289 ORTHO05D004594 5.2e-262 907.1 447 100.0
TAR636G3131 Trochodendron aralioides HOM05D003289 ORTHO05D004594 1.0e-140 504.2 397 64.5
Nn2g14071 Nelumbo nucifera HOM05D003289 ORTHO05D004594 1.1e-139 500.7 388 64.4
PSO384G0460 Papaver somniferum HOM05D003289 ORTHO05D004594 2.2e-135 486.5 388 60.8
PSO425G0048 Papaver somniferum HOM05D003289 ORTHO05D004594 2.9e-135 486.1 388 61.1
GSVIVG01031365001 Vitis vinifera HOM05D003289 ORTHO05D004594 1.9e-134 483.4 382 62.6
Actinidia07230 Actinidia chinensis HOM05D003289 ORTHO05D004594 1.7e-132 476.9 394 61.7
Ciclev10027662m.g Citrus clementina HOM05D003289 ORTHO05D004594 5.6e-131 471.9 383 61.1
QL01p013239 Quercus lobata HOM05D003289 ORTHO05D004594 2.8e-130 469.5 397 59.9
CSS0049320 Camellia sinensis var. sinensis HOM05D003289 ORTHO05D004594 3.6e-130 469.2 395 61.3
Gohir.A05G082500 Gossypium hirsutum HOM05D003289 ORTHO05D004594 1.1e-129 467.6 384 59.4
Atru.chr3.3336 Acer truncatum HOM05D003289 ORTHO05D004594 1.4e-129 467.2 387 61.2
Gohir.D05G085400 Gossypium hirsutum HOM05D003289 ORTHO05D004594 5.3e-129 465.3 384 59.1
Gorai.009G087200 Gossypium raimondii HOM05D003289 ORTHO05D004594 2.0e-128 463.4 384 58.9
Duzib168G1226 Durio zibethinus HOM05D003289 ORTHO05D004594 5.8e-128 461.8 390 58.7
Ca_19261_v3 Cicer arietinum L. HOM05D003289 ORTHO05D004594 7.6e-128 461.5 385 59.0
Aqoxy2G01337 Aquilegia oxysepala HOM05D003289 ORTHO05D004594 9.9e-128 461.1 399 57.6
Medtr4g054980 Medicago truncatula HOM05D003289 ORTHO05D004594 1.3e-127 460.7 383 59.3
Phvul.011G091900 Phaseolus vulgaris HOM05D003289 ORTHO05D004594 1.3e-127 460.7 381 60.4
Os02g0511901 Oryza sativa ssp. japonica HOM05D003289 ORTHO05D004594 1.7e-127 460.3 384 58.9
Psat7g153200 Pisum sativum HOM05D003289 ORTHO05D004594 1.7e-127 460.3 385 59.2
Thecc.09G288000 Theobroma cacao HOM05D003289 ORTHO05D004594 1.7e-127 460.3 387 58.9
TPR.G15595 Trifolium pratense HOM05D003289 ORTHO05D004594 2.2e-127 459.9 382 59.9
Lj3g0000987 Lotus japonicus HOM05D003289 ORTHO05D004594 3.8e-127 459.1 386 58.8
Potri.004G185700 Populus trichocarpa HOM05D003289 ORTHO05D004594 6.4e-127 458.4 388 58.0
Lj2C988G5 Lonicera japonica HOM05D003289 ORTHO05D004594 8.4e-127 458.0 397 58.7
Sabra04G0125000 Salix brachista HOM05D003289 ORTHO05D004594 1.4e-126 457.2 388 58.0
ATR0820G074 Amborella trichopoda HOM05D003289 ORTHO05D004594 1.9e-126 456.8 394 56.9
Cc01_g09530 Coffea canephora HOM05D003289 ORTHO05D004594 2.4e-126 456.4 387 59.4
AUR62039240 Chenopodium quinoa HOM05D003289 ORTHO05D004594 3.2e-126 456.1 416 56.5
CANSAT54G1671 Cannabis sativa HOM05D003289 ORTHO05D004594 7.1e-126 454.9 389 59.1
COL.COLO4_19937 Corchorus olitorius HOM05D003289 ORTHO05D004594 1.6e-125 453.8 388 59.0
Zm00001eb241860 Zea mays HOM05D003289 ORTHO05D004594 1.6e-125 453.8 382 59.2
THA.LOC104826411 Tarenaya hassleriana HOM05D003289 ORTHO05D004594 2.1e-125 453.4 381 59.1
Lalb_Chr19g0136661 Lupinus albus HOM05D003289 ORTHO05D004594 2.7e-125 453.0 388 58.5
SEGI_26591 Sequoiadendron giganteum HOM05D003289 ORTHO05D004594 7.8e-125 451.4 391 57.5
VMungo1127G1826 Vigna mungo HOM05D003289 ORTHO05D004594 1.3e-124 450.7 381 59.1
Eucgr.B03882 Eucalyptus grandis HOM05D003289 ORTHO05D004594 5.1e-124 448.7 390 57.9
FvH4_3g29570 Fragaria vesca HOM05D003289 ORTHO05D004594 4.3e-123 445.7 390 56.9
HPP92_025278 Vanilla planifolia HOM05D003289 ORTHO05D004594 4.3e-123 445.7 383 58.5
Haze_23425 Corylus avellana HOM05D003289 ORTHO05D004594 7.3e-123 444.9 414 57.2
FAN11G3202 Fragaria x ananassa HOM05D003289 ORTHO05D004594 7.3e-123 444.9 390 57.2
FAN16G3075 Fragaria x ananassa HOM05D003289 ORTHO05D004594 7.3e-123 444.9 390 56.9
Sopen11g026820 Solanum pennellii HOM05D003289 ORTHO05D004594 2.1e-122 443.4 387 56.6
RcHm_v2.0_Chr5g0054631 Rosa chinensis HOM05D003289 ORTHO05D004594 2.8e-122 443.0 391 57.0
Glyma.12G087000 Glycine max HOM05D003289 ORTHO05D004594 3.6e-122 442.6 388 58.0
SalBow3G0618 Salvia bowleyana HOM05D003289 ORTHO05D004594 3.6e-122 442.6 383 60.3
Solyc11g067140.2 Solanum lycopersicum HOM05D003289 ORTHO05D004594 3.6e-122 442.6 387 56.1
CAN.G644.7 Capsicum annuum HOM05D003289 ORTHO05D004594 6.2e-122 441.8 392 56.1
Prupe.6G124200 Prunus persica HOM05D003289 ORTHO05D004594 6.2e-122 441.8 391 55.8
SGA_v2.0_scaffold102G29919 Striga asiatica HOM05D003289 ORTHO05D004594 3.1e-121 439.5 383 56.4
MSTRG.17714 Avicennia marina HOM05D003289 ORTHO05D004594 5.3e-121 438.7 386 57.8
Lsat_1_v5_gn_6_39380 Lactuca sativa HOM05D003289 ORTHO05D004594 1.2e-120 437.6 403 56.1
Peaxi162Scf00544g00919 Petunia axillaris HOM05D003289 ORTHO05D004594 2.6e-120 436.4 385 55.8
Oeu031488.2 Olea europaea HOM05D003289 ORTHO05D004594 3.4e-120 436.0 395 57.0
Migut.N02501 Erythranthe guttata HOM05D003289 ORTHO05D004594 1.7e-119 433.7 396 55.8
PGR102G2277 Punica granatum HOM05D003289 ORTHO05D004594 2.2e-119 433.3 388 56.4
EL10Ac7g15792 Beta vulgaris HOM05D003289 ORTHO05D004594 4.9e-119 432.2 386 56.0
Lsat_1_v5_gn_6_39840 Lactuca sativa HOM05D003289 ORTHO05D004594 4.9e-119 432.2 404 56.4
Nitab4.5_0003532g0050 Nicotiana tabacum HOM05D003289 ORTHO05D004594 6.4e-119 431.8 391 56.0
ClCG02G022050 Citrullus lanatus HOM05D003289 ORTHO05D004594 1.4e-118 430.6 380 57.1
Hund20868 Selenicereus undatus HOM05D003289 ORTHO05D004594 3.2e-118 429.5 386 55.2
MELO3C021434.2 Cucumis melo HOM05D003289 ORTHO05D004594 1.2e-117 427.6 380 56.8
MD11G1160700 Malus domestica HOM05D003289 ORTHO05D004594 2.7e-117 426.4 412 53.2
CsaV3_6G014890 Cucumis sativus L. HOM05D003289 ORTHO05D004594 4.6e-117 425.6 381 56.2
MD03G1139200 Malus domestica HOM05D003289 ORTHO05D004594 1.1e-115 421.0 391 53.5
Sed0008797 Sechium edule HOM05D003289 ORTHO05D004594 2.5e-115 419.9 380 56.3
MBI15_g14875_MAGBIO Magnolia biondii HOM05D003289 ORTHO05D004594 1.1e-113 414.5 350 60.0
arahy.Tifrunner.gnm1.ann1.U78W58 Arachis hypogaea HOM05D003289 ORTHO05D004594 4.0e-113 412.5 384 56.5
Pp3c13_4500 Physcomitrium patens HOM05D003289 ORTHO05D004594 9.0e-113 411.4 400 52.5
Rhsim13G0107600 Rhododendron simsii HOM05D003289 ORTHO05D004594 2.0e-112 410.2 395 55.2
AUR62009793 Chenopodium quinoa HOM05D003289 ORTHO05D004594 9.9e-112 407.9 354 57.9
HanXRQChr05g0145141 Helianthus annuus HOM05D003289 ORTHO05D004594 4.9e-111 405.6 378 54.2
SMO144G0205 Selaginella moellendorffii HOM05D003289 ORTHO05D004594 1.9e-110 403.7 380 55.0
Mapoly0006s0290 Marchantia polymorpha HOM05D003289 ORTHO05D004594 1.6e-109 400.6 389 52.7
arahy.Tifrunner.gnm1.ann1.B2Y78K Arachis hypogaea HOM05D003289 ORTHO05D004594 1.3e-108 397.5 485 46.6
unitig_22.g6642 Utricularia gibba HOM05D003289 ORTHO05D004594 1.8e-108 397.1 380 54.5
vmacro03295 Vaccinium macrocarpon HOM05D003289 ORTHO05D004594 4.0e-105 386.0 394 54.1
ECA233G3796 Erigeron canadensis HOM05D003289 ORTHO05D004594 1.3e-103 380.9 341 57.2
AagrBONN_evm.TU.Sc2ySwM_340.389 Anthoceros agrestis HOM05D003289 ORTHO05D004594 2.9e-103 379.8 412 48.3
SHI18830 Sapria himalayana HOM05D003289 ORTHO05D004594 6.5e-103 378.6 382 51.3
ClCG09G020580 Citrullus lanatus HOM05D003289 ORTHO05D004594 1.4e-102 377.5 377 52.0
DCAR_012181 Daucus carota HOM05D003289 ORTHO05D004594 1.4e-102 377.5 344 57.6
HanXRQChr09g0249481 Helianthus annuus HOM05D003289 ORTHO05D004594 2.5e-102 376.7 404 50.5
SGA_v2.0_scaffold424G51468 Striga asiatica HOM05D003289 ORTHO05D004594 1.2e-101 374.4 383 49.9
arahy.Tifrunner.gnm1.ann1.F25EMM Arachis hypogaea HOM05D003289 ORTHO05D004594 1.6e-101 374.0 388 52.1
CBR_g8396 Chara braunii HOM05D003289 ORTHO05D004594 1.9e-99 367.1 427 45.7
Aa31LG2G19310 Aethionema arabicum HOM05D003289 ORTHO05D004594 5.7e-99 365.5 382 51.0
CAN.G1177.9 Capsicum annuum HOM05D003289 ORTHO05D004594 1.8e-97 360.5 348 51.4
AL1G18660 Arabidopsis lyrata HOM05D003289 ORTHO05D004594 2.5e-91 340.1 388 46.9
Thhalv10006524m.g Eutrema salsugineum HOM05D003289 ORTHO05D004594 7.4e-91 338.6 388 46.9
AT1G08260 Arabidopsis thaliana HOM05D003289 ORTHO05D004594 1.3e-90 337.8 388 47.2
A06p05280 Brassica napus HOM05D003289 ORTHO05D004594 2.2e-90 337.0 382 47.1
AL4G20810 Arabidopsis lyrata HOM05D003289 ORTHO05D004594 2.8e-90 336.7 382 47.4
C05p06350 Brassica napus HOM05D003289 ORTHO05D004594 3.7e-90 336.3 388 46.4
AL4G20650 Arabidopsis lyrata HOM05D003289 ORTHO05D004594 6.3e-90 335.5 386 45.9
CARHR008100 Cardamine hirsuta HOM05D003289 ORTHO05D004594 6.3e-90 335.5 389 47.0
Carub.0001s0761 Capsella rubella HOM05D003289 ORTHO05D004594 4.1e-89 332.8 388 47.2
BolC5t29391H Brassica oleracea HOM05D003289 ORTHO05D004594 1.7e-87 327.4 402 45.0
Sp1g06890 Schrenkiella parvula HOM05D003289 ORTHO05D004594 2.2e-87 327.0 386 45.9
BraA06t23736Z Brassica rapa HOM05D003289 ORTHO05D004594 5.0e-87 325.9 396 45.2
Manes.04G006100 Manihot esculenta HOM05D003289 ORTHO05D004594 9.4e-86 321.6 389 45.8
AT2G27120 Arabidopsis thaliana HOM05D003289 ORTHO05D004594 2.1e-85 320.5 382 45.0
MELO3C033806.2 Cucumis melo HOM05D003289 ORTHO05D004594 4.5e-72 276.2 328 44.2
CiPaw.13G138800 Carya illinoinensis HOM05D003289 ORTHO05D004594 2.7e-69 266.9 220 60.5
Cpa.g.sc32.131 Carica papaya HOM05D003289 ORTHO05D004594 5.5e-62 242.7 248 52.4
Nitab4.5_0004240g0020 Nicotiana tabacum HOM05D003289 ORTHO05D004594 5.5e-62 242.7 253 51.8
BcaB07g34067 Brassica carinata HOM05D003289 ORTHO05D004594 1.5e-59 234.6 307 43.3
MCO02G508 Micromonas commoda HOM05D003289 ORTHO05D004594 2.7e-56 223.8 459 32.2
Cre03.g179961 Chlamydomonas reinhardtii HOM05D003289 ORTHO05D004594 1.8e-52 211.1 400 33.2
PRCOL_00004747 Prasinoderma coloniale HOM05D003289 ORTHO05D004594 5.0e-47 193.0 398 30.2
BcaB03g13343 Brassica carinata HOM05D003289 ORTHO05D004594 3.0e-39 167.2 126 60.3
Rhsim05G0032400 Rhododendron simsii HOM05D003289 ORTHO05D004594 3.9e-39 166.8 222 47.3
Cfa025881 Carpinus fangiana HOM05D003289 ORTHO05D004594 4.6e-32 143.3 379 26.4
Sc21g0007220 Simmondsia chinensis HOM05D003289 ORTHO05D004594 4.6e-32 143.3 134 57.5
BcaC07g41675 Brassica carinata HOM05D003289 ORTHO05D026451 1.0e-31 142.1 215 41.4
CiPaw.13G138900 Carya illinoinensis HOM05D003289 ORTHO05D004594 2.6e-27 127.5 75 84.0
CARHR055750 Cardamine hirsuta HOM05D003289 ORTHO05D004594 2.2e-26 124.4 112 57.1
C08p47080 Brassica napus HOM05D003555 ORTHO05D004542 5.1e-23 113.2 111 51.4
BolC8t52247H Brassica oleracea HOM05D003555 ORTHO05D004542 1.1e-20 105.5 102 49.0
BraA09t41708Z Brassica rapa HOM05D003555 ORTHO05D004542 1.8e-20 104.8 82 54.9
DCAR_017672 Daucus carota HOM05D003289 ORTHO05D004594 1.1e-17 95.5 57 78.9
QL02p000117 Quercus lobata HOM05D003289 ORTHO05D004594 4.3e-14 83.6 53 79.2
Aa31LG1G180 Aethionema arabicum HOM05D003289 ORTHO05D004594 2.4e-09 67.8 80 46.2
Aa31LG1G190 Aethionema arabicum HOM05D003289 ORTHO05D026451 5.4e-09 66.6 95 44.2
SEGI_20214 Sequoiadendron giganteum HOM05D003289 ORTHO05D000003 2.7e-08 64.3 93 38.7
CARHR055740 Cardamine hirsuta HOM05D003289 ORTHO05D026451 3.9e-07 60.5 96 38.5
SEGI_12002 Sequoiadendron giganteum HOM05D003289 ORTHO05D004594 8.7e-07 59.3 75 40.0
CDE06G0304 Ceratophyllum demersum HOM05D001078 ORTHO05D000927 7.3e-06 56.2 25 92.0


User provided reference genes

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