Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G2105 Ceratophyllum demersum HOM05D005142 ORTHO05D006519 2.5e-223 778.5 398 100.0
CDE02G0581 Ceratophyllum demersum HOM05D005142 ORTHO05D006519 1.2e-124 450.7 479 60.3
MBI04_g22605_MAGBIO Magnolia biondii HOM05D005142 ORTHO05D006519 3.2e-37 160.2 177 52.5
GSVIVG01027570001 Vitis vinifera HOM05D005142 ORTHO05D006519 4.2e-37 159.8 190 49.5
QL08p051359 Quercus lobata HOM05D005142 ORTHO05D006519 5.5e-37 159.5 177 50.8
QL93p0336_0055 Quercus lobata HOM05D005142 ORTHO05D006519 5.5e-37 159.5 177 50.8
TAR629G0531 Trochodendron aralioides HOM05D005142 ORTHO05D006519 5.5e-37 159.5 164 54.3
Dinv43736 Davidia involucrata HOM05D005142 ORTHO05D006519 1.2e-36 158.3 167 52.7
COL.COLO4_31207 Corchorus olitorius HOM05D005142 ORTHO05D006519 1.6e-36 157.9 174 54.0
Thecc.01G372200 Theobroma cacao HOM05D005142 ORTHO05D006519 1.6e-36 157.9 180 51.1
CANSAT56G4462 Cannabis sativa HOM05D005142 ORTHO05D006519 2.1e-36 157.5 167 50.9
Sc02g0002360 Simmondsia chinensis HOM05D005142 ORTHO05D006519 2.7e-36 157.1 167 51.5
Aqoxy7G00511 Aquilegia oxysepala HOM05D005142 ORTHO05D006519 3.6e-36 156.8 164 51.8
Atru.chr5.361 Acer truncatum HOM05D005142 ORTHO05D006519 4.6e-36 156.4 167 52.1
Manes.05G042700 Manihot esculenta HOM05D005142 ORTHO05D006519 6.1e-36 156.0 178 48.9
Dinv32401 Davidia involucrata HOM05D005142 ORTHO05D006519 7.9e-36 155.6 183 49.2
CiPaw.02G165000 Carya illinoinensis HOM05D005142 ORTHO05D006519 1.4e-35 154.8 167 50.9
Actinidia31444 Actinidia chinensis HOM05D005142 ORTHO05D006519 2.3e-35 154.1 167 53.3
EL10Ac1g00917 Beta vulgaris HOM05D005142 ORTHO05D006519 3.0e-35 153.7 166 52.4
Gohir.A11G083300 Gossypium hirsutum HOM05D005142 ORTHO05D006519 3.0e-35 153.7 189 50.3
Ciclev10023615m.g Citrus clementina HOM05D005142 ORTHO05D006519 3.9e-35 153.3 194 46.9
Gorai.007G093300 Gossypium raimondii HOM05D005142 ORTHO05D006519 5.1e-35 152.9 189 50.3
AUR62004260 Chenopodium quinoa HOM05D005142 ORTHO05D006519 6.7e-35 152.5 168 50.6
Haze_16720 Corylus avellana HOM05D005142 ORTHO05D006519 8.8e-35 152.1 175 49.7
Actinidia09572 Actinidia chinensis HOM05D005142 ORTHO05D006519 1.5e-34 151.4 170 52.9
Gohir.D12G105800 Gossypium hirsutum HOM05D005142 ORTHO05D006519 2.5e-34 150.6 181 50.8
Gorai.008G115100 Gossypium raimondii HOM05D005142 ORTHO05D006519 3.3e-34 150.2 181 50.8
Lsat_1_v5_gn_3_135321 Lactuca sativa HOM05D005142 ORTHO05D006519 3.3e-34 150.2 172 50.6
Cfa001828 Carpinus fangiana HOM05D005142 ORTHO05D006519 4.3e-34 149.8 175 49.7
CSS0026616 Camellia sinensis var. sinensis HOM05D005142 ORTHO05D006519 5.7e-34 149.4 167 50.9
Duzib138G0662 Durio zibethinus HOM05D005142 ORTHO05D006519 5.7e-34 149.4 180 50.6
CSS0024486 Camellia sinensis var. sinensis HOM05D005142 ORTHO05D006519 7.4e-34 149.1 167 50.9
Gohir.D11G087400 Gossypium hirsutum HOM05D005142 ORTHO05D006519 7.4e-34 149.1 189 49.2
Gohir.D11G087460 Gossypium hirsutum HOM05D005142 ORTHO05D006519 7.4e-34 149.1 189 49.2
VMungo0331G0422 Vigna mungo HOM05D005142 ORTHO05D006519 7.4e-34 149.1 167 49.1
Ca_20180_v3 Cicer arietinum L. HOM05D005142 ORTHO05D006519 1.3e-33 148.3 172 50.0
Ca_20181_v3 Cicer arietinum L. HOM05D005142 ORTHO05D006519 1.3e-33 148.3 172 50.0
Hma1.2p1_0033F.1_g020810 Hydrangea macrophylla HOM05D005142 ORTHO05D006519 1.3e-33 148.3 166 51.2
Nn6g34331 Nelumbo nucifera HOM05D005142 ORTHO05D006519 2.2e-33 147.5 169 47.3
Nitab4.5_0008042g0040 Nicotiana tabacum HOM05D005142 ORTHO05D006519 3.7e-33 146.7 167 49.7
TPR.G15434 Trifolium pratense HOM05D005142 ORTHO05D006519 3.7e-33 146.7 169 49.1
MD02G1198200 Malus domestica HOM05D005142 ORTHO05D006519 4.8e-33 146.4 185 45.4
Psat4g150880 Pisum sativum HOM05D005142 ORTHO05D006519 4.8e-33 146.4 163 50.3
HanXRQChr03g0093651 Helianthus annuus HOM05D005142 ORTHO05D006519 6.3e-33 146.0 172 48.3
Cpa.g.sc18.161 Carica papaya HOM05D005142 ORTHO05D006519 8.2e-33 145.6 172 49.4
Hund27339 Selenicereus undatus HOM05D005142 ORTHO05D006519 8.2e-33 145.6 172 48.3
TWI14G0649 Tripterygium wilfordii HOM05D005142 ORTHO05D006519 8.2e-33 145.6 177 49.7
CiPaw.01G259000 Carya illinoinensis HOM05D005142 ORTHO05D006519 1.1e-32 145.2 180 46.7
Gohir.A12G102600 Gossypium hirsutum HOM05D005142 ORTHO05D006519 1.1e-32 145.2 181 49.7
Nitab4.5_0002436g0100 Nicotiana tabacum HOM05D005142 ORTHO05D006519 2.4e-32 144.1 167 49.7
Peaxi162Scf00988g00323 Petunia axillaris HOM05D005142 ORTHO05D006519 2.4e-32 144.1 167 49.7
Glyma.03G020100 Glycine max HOM05D005142 ORTHO05D006519 3.1e-32 143.7 167 49.7
PGSC0003DMG400000138 Solanum tuberosum HOM05D005142 ORTHO05D006519 3.1e-32 143.7 189 44.4
Rhsim07G0023700 Rhododendron simsii HOM05D005142 ORTHO05D006519 4.1e-32 143.3 165 48.5
Sabra14G0052300 Salix brachista HOM05D005142 ORTHO05D006519 4.1e-32 143.3 174 47.1
Aa31LG1G27100 Aethionema arabicum HOM05D005142 ORTHO05D006519 5.3e-32 142.9 177 45.8
Phvul.010G086700 Phaseolus vulgaris HOM05D005142 ORTHO05D006519 5.3e-32 142.9 167 50.3
PGR031G2766 Punica granatum HOM05D005142 ORTHO05D006519 6.9e-32 142.5 173 46.8
TWI23G0741 Tripterygium wilfordii HOM05D005142 ORTHO05D006519 9.1e-32 142.1 172 48.3
HPP92_014573 Vanilla planifolia HOM05D005142 ORTHO05D006519 9.1e-32 142.1 199 46.2
ECA240G0324 Erigeron canadensis HOM05D005142 ORTHO05D006519 1.2e-31 141.7 173 47.4
Solyc01g094000.3 Solanum lycopersicum HOM05D005142 ORTHO05D006519 1.2e-31 141.7 167 48.5
Carub.0004s2826 Capsella rubella HOM05D005142 ORTHO05D006519 1.5e-31 141.4 189 43.9
Glyma.07G082200 Glycine max HOM05D005142 ORTHO05D006519 1.5e-31 141.4 167 49.1
Oeu008624.1 Olea europaea HOM05D005142 ORTHO05D006519 1.5e-31 141.4 159 49.1
vmacro13362 Vaccinium macrocarpon HOM05D005142 ORTHO05D006519 1.5e-31 141.4 144 54.2
Medtr8g033420 Medicago truncatula HOM05D005142 ORTHO05D006519 2.0e-31 141.0 136 55.9
Lj3g0017003 Lotus japonicus HOM05D005142 ORTHO05D006519 3.4e-31 140.2 138 56.5
Potri.002G151000 Populus trichocarpa HOM05D005142 ORTHO05D006519 3.4e-31 140.2 179 46.4
Potri.014G073300 Populus trichocarpa HOM05D005142 ORTHO05D006519 3.4e-31 140.2 122 58.2
Migut.B01666 Erythranthe guttata HOM05D005142 ORTHO05D006519 7.7e-31 139.0 186 45.7
RcHm_v2.0_Chr1g0351451 Rosa chinensis HOM05D005142 ORTHO05D006519 7.7e-31 139.0 177 46.3
Sopen01g037820 Solanum pennellii HOM05D005142 ORTHO05D006519 7.7e-31 139.0 195 44.1
Eucgr.D02430 Eucalyptus grandis HOM05D005142 ORTHO05D006519 1.3e-30 138.3 190 45.3
Lalb_Chr07g0189491 Lupinus albus HOM05D005142 ORTHO05D006519 1.7e-30 137.9 177 46.9
THA.LOC104802001 Tarenaya hassleriana HOM05D005142 ORTHO05D006519 2.2e-30 137.5 173 45.7
MSTRG.20775 Avicennia marina HOM05D005142 ORTHO05D006519 3.8e-30 136.7 175 44.6
AT2G45620 Arabidopsis thaliana HOM05D005142 ORTHO05D006519 5.0e-30 136.3 179 44.1
ClCG06G000240 Citrullus lanatus HOM05D005142 ORTHO05D006519 5.0e-30 136.3 172 46.5
Cc00_g19600 Coffea canephora HOM05D005142 ORTHO05D006519 8.5e-30 135.6 180 46.7
CsaV3_6G006030 Cucumis sativus L. HOM05D005142 ORTHO05D006519 1.4e-29 134.8 172 45.9
SGA_v2.0_scaffold153G37048 Striga asiatica HOM05D005142 ORTHO05D006519 1.4e-29 134.8 143 51.0
FAN06G0597 Fragaria x ananassa HOM05D005142 ORTHO05D006519 1.9e-29 134.4 358 33.0
Sabra02G0119300 Salix brachista HOM05D005142 ORTHO05D006519 1.9e-29 134.4 360 33.9
THA.LOC104827620 Tarenaya hassleriana HOM05D005142 ORTHO05D006519 1.9e-29 134.4 171 45.6
FAN10G1433 Fragaria x ananassa HOM05D005142 ORTHO05D006519 2.5e-29 134.0 177 45.2
FAN10G3320 Fragaria x ananassa HOM05D005142 ORTHO05D006519 2.5e-29 134.0 177 45.2
Sp4g27670 Schrenkiella parvula HOM05D005142 ORTHO05D006519 4.2e-29 133.3 183 44.3
MELO3C022514.2 Cucumis melo HOM05D005142 ORTHO05D006519 5.5e-29 132.9 161 48.4
Thhalv10001324m.g Eutrema salsugineum HOM05D005142 ORTHO05D006519 5.5e-29 132.9 174 46.6
Ah.05g175530 Amaranthus hybridus HOM05D005142 ORTHO05D006519 7.2e-29 132.5 173 43.9
BolC4t28673H Brassica oleracea HOM05D005142 ORTHO05D006519 7.2e-29 132.5 140 50.7
Zm00001eb224220 Zea mays HOM05D005142 ORTHO05D006519 7.2e-29 132.5 166 45.8
AL4G44790 Arabidopsis lyrata HOM05D005142 ORTHO05D006519 9.4e-29 132.1 174 44.3
A04p33930 Brassica napus HOM05D005142 ORTHO05D006519 9.4e-29 132.1 115 56.5
BraA04t18854Z Brassica rapa HOM05D005142 ORTHO05D006519 9.4e-29 132.1 115 56.5
FAN06G0957 Fragaria x ananassa HOM05D005142 ORTHO05D006519 9.4e-29 132.1 358 32.7
DCAR_008569 Daucus carota HOM05D005142 ORTHO05D006519 2.1e-28 131.0 175 46.3
FAN01G1647 Fragaria x ananassa HOM05D005142 ORTHO05D006519 2.1e-28 131.0 362 32.0
BcaC02g07079 Brassica carinata HOM05D005142 ORTHO05D006519 2.7e-28 130.6 138 51.4
C04p71740 Brassica napus HOM05D005142 ORTHO05D006519 2.7e-28 130.6 138 51.4
CARHR140840 Cardamine hirsuta HOM05D005142 ORTHO05D006519 2.7e-28 130.6 182 44.0
FAN03G1702 Fragaria x ananassa HOM05D005142 ORTHO05D006519 2.7e-28 130.6 363 32.5
FvH4_7g12540 Fragaria vesca HOM05D005142 ORTHO05D006519 3.6e-28 130.2 358 32.4
SGA_v2.0_scaffold95G28881 Striga asiatica HOM05D005142 ORTHO05D006519 3.6e-28 130.2 143 51.7
PSO478G0855 Papaver somniferum HOM05D005142 ORTHO05D006519 4.7e-28 129.8 187 40.6
BcaB06g29434 Brassica carinata HOM05D005142 ORTHO05D006519 6.1e-28 129.4 140 49.3
Lalb_Chr12g0208461 Lupinus albus HOM05D005142 ORTHO05D006519 6.1e-28 129.4 177 44.1
SalBow7G2728 Salvia bowleyana HOM05D005142 ORTHO05D006519 7.9e-28 129.0 172 45.9
Os10g0188300 Oryza sativa ssp. japonica HOM05D005142 ORTHO05D006519 1.0e-27 128.6 141 49.6
PSO782G2935 Papaver somniferum HOM05D005142 ORTHO05D006519 2.3e-27 127.5 187 40.1
unitig_0.g1293 Utricularia gibba HOM05D005142 ORTHO05D006519 1.3e-25 121.7 168 42.3
Gorai.010G161200 Gossypium raimondii HOM05D005142 ORTHO05D006519 2.8e-25 120.6 109 59.6
Sed0025531 Sechium edule HOM05D005142 ORTHO05D006519 4.8e-25 119.8 173 43.4
HPP92_014586 Vanilla planifolia HOM05D005142 ORTHO05D006519 1.6e-23 114.8 180 46.1
SEGI_20485 Sequoiadendron giganteum HOM05D005142 ORTHO05D006519 2.6e-23 114.0 150 40.0
VMungo0331G1088 Vigna mungo HOM05D005142 ORTHO05D006519 2.6e-23 114.0 129 49.6
Mapoly0079s0057 Marchantia polymorpha HOM05D005142 ORTHO05D006519 2.2e-22 110.9 113 45.1
Os02g0122100 Oryza sativa ssp. japonica HOM05D005142 ORTHO05D006519 2.5e-21 107.5 110 50.9
EL10Ac8g19930 Beta vulgaris HOM05D005142 ORTHO05D006519 3.6e-20 103.6 68 73.5
Zm00001eb230480 Zea mays HOM05D005142 ORTHO05D006519 8.8e-19 99.0 103 45.6
Migut.N01409 Erythranthe guttata HOM05D005142 ORTHO05D006519 3.3e-18 97.1 104 45.2
AagrBONN_evm.TU.Sc2ySwM_117.1828 Anthoceros agrestis HOM05D005142 ORTHO05D006519 1.7e-17 94.7 184 32.1
ATR0661G093 Amborella trichopoda HOM05D005142 ORTHO05D006519 7.0e-16 89.4 121 43.8
SMO144G0107 Selaginella moellendorffii HOM05D005142 ORTHO05D006519 1.2e-15 88.6 115 35.7
Pp3c2_23720 Physcomitrium patens HOM05D005142 ORTHO05D006519 3.2e-13 80.5 198 27.3
SMO226G0009 Selaginella moellendorffii HOM05D013304 ORTHO05D375547 2.1e-12 77.8 131 32.8
SMO226G0017 Selaginella moellendorffii HOM05D013304 ORTHO05D377335 2.7e-07 60.8 99 30.3


User provided reference genes

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