Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G1840 Ceratophyllum demersum HOM05D001724 ORTHO05D007284 3.4e-175 618.2 312 100.0
Dinv10341 Davidia involucrata HOM05D001724 ORTHO05D007284 5.3e-104 381.7 239 74.5
Rhsim06G0230500 Rhododendron simsii HOM05D001724 ORTHO05D007284 2.0e-103 379.8 238 73.9
vmacro11596 Vaccinium macrocarpon HOM05D001724 ORTHO05D007284 2.6e-103 379.4 238 73.5
Eucgr.F03687 Eucalyptus grandis HOM05D001724 ORTHO05D007284 7.7e-103 377.9 238 72.7
Aa31LG8G390 Aethionema arabicum HOM05D001724 ORTHO05D007284 1.0e-102 377.5 240 73.8
CSS0036592 Camellia sinensis var. sinensis HOM05D001724 ORTHO05D007284 5.5e-101 371.7 235 74.0
Cpa.g.sc12.118 Carica papaya HOM05D001724 ORTHO05D007284 5.5e-101 371.7 239 72.8
THA.LOC104815694 Tarenaya hassleriana HOM05D001724 ORTHO05D007284 5.5e-101 371.7 280 65.0
Cc05_g15000 Coffea canephora HOM05D001724 ORTHO05D007284 9.4e-101 370.9 235 74.0
ECA236G1337 Erigeron canadensis HOM05D001724 ORTHO05D007284 1.2e-100 370.5 239 72.8
Lj8C179G13 Lonicera japonica HOM05D001724 ORTHO05D007284 1.6e-100 370.2 238 72.7
Carub.0003s1253 Capsella rubella HOM05D001724 ORTHO05D007284 2.7e-100 369.4 240 72.1
TAR629G2623 Trochodendron aralioides HOM05D001724 ORTHO05D007284 3.6e-100 369.0 306 61.4
Aqoxy4G02217 Aquilegia oxysepala HOM05D001724 ORTHO05D007284 4.7e-100 368.6 242 71.1
Duzib268G0190 Durio zibethinus HOM05D001724 ORTHO05D007284 4.7e-100 368.6 236 72.5
HanXRQChr15g0492631 Helianthus annuus HOM05D001724 ORTHO05D007284 6.1e-100 368.2 264 66.3
Peaxi162Scf00006g00319 Petunia axillaris HOM05D001724 ORTHO05D007284 6.1e-100 368.2 239 71.1
Cfa020185 Carpinus fangiana HOM05D001724 ORTHO05D007284 8.0e-100 367.9 238 71.4
Gohir.D01G062200 Gossypium hirsutum HOM05D001724 ORTHO05D007284 8.0e-100 367.9 235 73.2
Gorai.002G100800 Gossypium raimondii HOM05D001724 ORTHO05D007284 8.0e-100 367.9 235 73.2
Gohir.A01G092000 Gossypium hirsutum HOM05D001724 ORTHO05D007284 1.0e-99 367.5 235 72.8
Ciclev10010260m.g Citrus clementina HOM05D001724 ORTHO05D007284 1.4e-99 367.1 239 71.1
A01p40360 Brassica napus HOM05D001724 ORTHO05D007284 2.3e-99 366.3 239 71.5
BraA01t04071Z Brassica rapa HOM05D001724 ORTHO05D007284 2.3e-99 366.3 239 71.5
Thhalv10020504m.g Eutrema salsugineum HOM05D001724 ORTHO05D007284 3.0e-99 365.9 240 71.7
Potri.001G368500 Populus trichocarpa HOM05D001724 ORTHO05D007284 3.0e-99 365.9 252 68.3
Sp3g11360 Schrenkiella parvula HOM05D001724 ORTHO05D007284 3.0e-99 365.9 261 67.4
C01p51890 Brassica napus HOM05D001724 ORTHO05D007284 5.2e-99 365.2 239 71.1
BolC1t05137H Brassica oleracea HOM05D001724 ORTHO05D007284 5.2e-99 365.2 239 71.1
Migut.M01648 Erythranthe guttata HOM05D001724 ORTHO05D007284 5.2e-99 365.2 235 72.3
Oeu049406.1 Olea europaea HOM05D001724 ORTHO05D007284 5.2e-99 365.2 236 71.6
Thecc.07G012400 Theobroma cacao HOM05D001724 ORTHO05D007284 6.7e-99 364.8 238 71.4
AT3G13180 Arabidopsis thaliana HOM05D001724 ORTHO05D007284 8.8e-99 364.4 239 70.7
Lsat_1_v5_gn_7_114320 Lactuca sativa HOM05D001724 ORTHO05D007284 8.8e-99 364.4 239 72.4
GSVIVG01014695001 Vitis vinifera HOM05D001724 ORTHO05D007284 8.8e-99 364.4 238 71.0
Ca_06399_v3 Cicer arietinum L. HOM05D001724 ORTHO05D007284 1.2e-98 364.0 276 65.6
Manes.15G059300 Manihot esculenta HOM05D001724 ORTHO05D007284 1.2e-98 364.0 239 70.3
TWI56G0926 Tripterygium wilfordii HOM05D001724 ORTHO05D007284 1.5e-98 363.6 239 71.1
BcaB04g21001 Brassica carinata HOM05D001724 ORTHO05D007284 2.0e-98 363.2 239 71.1
Actinidia30393 Actinidia chinensis HOM05D001724 ORTHO05D007284 2.6e-98 362.8 259 67.2
CANSAT11G0717 Cannabis sativa HOM05D001724 ORTHO05D007284 4.4e-98 362.1 302 62.3
Glyma.02G301000 Glycine max HOM05D001724 ORTHO05D007284 4.4e-98 362.1 277 66.4
PGR031G2084 Punica granatum HOM05D001724 ORTHO05D007284 4.4e-98 362.1 236 70.3
QL08p003952 Quercus lobata HOM05D001724 ORTHO05D007284 4.4e-98 362.1 238 69.7
Sc03g0011450 Simmondsia chinensis HOM05D001724 ORTHO05D007284 1.3e-97 360.5 248 67.7
PSO675G5997 Papaver somniferum HOM05D001724 ORTHO05D007284 2.2e-97 359.8 307 59.6
CiPaw.12G138600 Carya illinoinensis HOM05D001724 ORTHO05D007284 3.7e-97 359.0 238 69.3
Sopen12g007630 Solanum pennellii HOM05D001724 ORTHO05D007284 6.3e-97 358.2 239 69.5
LjContig00081g0019548 Lotus japonicus HOM05D001724 ORTHO05D007284 1.4e-96 357.1 266 66.2
PSO541G6316 Papaver somniferum HOM05D001724 ORTHO05D007284 1.4e-96 357.1 307 59.3
Solyc12g015710.2 Solanum lycopersicum HOM05D001724 ORTHO05D007284 1.4e-96 357.1 239 69.5
AL3G24930 Arabidopsis lyrata HOM05D001724 ORTHO05D007284 1.8e-96 356.7 242 69.4
Psat2g007080 Pisum sativum HOM05D001724 ORTHO05D007284 1.8e-96 356.7 261 67.4
SalBow8G2422 Salvia bowleyana HOM05D001724 ORTHO05D007284 2.4e-96 356.3 260 67.3
arahy.Tifrunner.gnm1.ann1.AFR4D1 Arachis hypogaea HOM05D001724 ORTHO05D007284 3.1e-96 355.9 241 71.4
MSTRG.15797 Avicennia marina HOM05D001724 ORTHO05D007284 3.1e-96 355.9 237 69.6
COL.COLO4_09842 Corchorus olitorius HOM05D001724 ORTHO05D007284 3.1e-96 355.9 236 70.3
Lalb_Chr10g0107431 Lupinus albus HOM05D001724 ORTHO05D007284 3.1e-96 355.9 235 71.1
Medtr5g096020 Medicago truncatula HOM05D001724 ORTHO05D007284 3.1e-96 355.9 233 73.0
PGSC0003DMG402029795 Solanum tuberosum HOM05D001724 ORTHO05D007284 7.0e-96 354.8 239 69.0
VMungo0647G0703 Vigna mungo HOM05D001724 ORTHO05D007284 7.0e-96 354.8 233 72.1
Prupe.6G024300 Prunus persica HOM05D001724 ORTHO05D007284 1.6e-95 353.6 238 69.3
Haze_09831 Corylus avellana HOM05D001724 ORTHO05D007284 3.5e-95 352.4 266 63.5
MD03G1027000 Malus domestica HOM05D001724 ORTHO05D007284 3.5e-95 352.4 236 69.1
Sabra16G0241600 Salix brachista HOM05D001724 ORTHO05D007284 7.7e-95 351.3 234 69.2
Hma1.2p1_2829F.1_g329190 Hydrangea macrophylla HOM05D001724 ORTHO05D007284 1.0e-94 350.9 239 70.7
Phvul.008G279400 Phaseolus vulgaris HOM05D001724 ORTHO05D007284 1.0e-94 350.9 235 71.1
Hund01886 Selenicereus undatus HOM05D001724 ORTHO05D007284 1.0e-94 350.9 239 67.8
SGA_v2.0_scaffold168G38565 Striga asiatica HOM05D001724 ORTHO05D007284 2.2e-94 349.7 241 68.9
TPR.G8601 Trifolium pratense HOM05D001724 ORTHO05D007284 5.0e-94 348.6 276 65.6
RcHm_v2.0_Chr5g0077011 Rosa chinensis HOM05D001724 ORTHO05D007284 7.2e-93 344.7 226 70.8
FvH4_3g42960 Fragaria vesca HOM05D001724 ORTHO05D007284 1.2e-92 344.0 225 71.1
Nitab4.5_0000163g0170 Nicotiana tabacum HOM05D001724 ORTHO05D007284 1.2e-92 344.0 224 71.9
HPP92_018204 Vanilla planifolia HOM05D001724 ORTHO05D007284 1.2e-92 344.0 268 63.1
arahy.Tifrunner.gnm1.ann1.HGG2PG Arachis hypogaea HOM05D001724 ORTHO05D007284 1.6e-92 343.6 253 66.8
FAN11G2991 Fragaria x ananassa HOM05D001724 ORTHO05D007284 1.6e-92 343.6 222 72.1
unitig_746.g26709 Utricularia gibba HOM05D001724 ORTHO05D007284 1.6e-92 343.6 239 69.5
Ah.04g166610 Amaranthus hybridus HOM05D001724 ORTHO05D007284 6.1e-92 341.7 298 57.4
FAN21G0812 Fragaria x ananassa HOM05D001724 ORTHO05D007284 6.1e-92 341.7 222 71.6
FAN25G0452 Fragaria x ananassa HOM05D001724 ORTHO05D007284 6.1e-92 341.7 225 71.1
Os09g0477900 Oryza sativa ssp. japonica HOM05D001724 ORTHO05D007284 7.5e-90 334.7 265 61.5
Zm00001eb101440 Zea mays HOM05D001724 ORTHO05D007284 4.8e-89 332.0 234 66.2
EL10Ac4g07557 Beta vulgaris HOM05D001724 ORTHO05D007284 3.1e-88 329.3 333 52.6
CAN.G325.2 Capsicum annuum HOM05D001724 ORTHO05D007284 5.4e-88 328.6 224 67.9
ATR0751G043 Amborella trichopoda HOM05D001724 ORTHO05D007284 7.0e-88 328.2 239 67.8
Atru.BG.138.p Acer truncatum HOM05D001724 ORTHO05D007284 1.2e-87 327.4 248 63.7
Atru.chr2.2823 Acer truncatum HOM05D001724 ORTHO05D007284 3.8e-86 322.4 280 57.5
Nitab4.5_0010137g0010 Nicotiana tabacum HOM05D001724 ORTHO05D007284 9.5e-85 317.8 240 63.3
FAN16G2293 Fragaria x ananassa HOM05D001724 ORTHO05D007284 1.3e-81 307.4 260 58.5
AUR62017112 Chenopodium quinoa HOM05D001724 ORTHO05D007284 9.8e-74 281.2 225 61.8
Pp3c27_2290 Physcomitrium patens HOM05D001724 ORTHO05D007284 3.2e-72 276.2 232 60.3
DCAR_022608 Daucus carota HOM05D001724 ORTHO05D007284 9.5e-69 264.6 322 46.6
AagrBONN_evm.TU.Sc2ySwM_344.5083 Anthoceros agrestis HOM05D001724 ORTHO05D007284 6.8e-67 258.5 238 53.8
Mapoly0080s0050 Marchantia polymorpha HOM05D001724 ORTHO05D007284 1.9e-64 250.4 240 54.2
AUR62036465 Chenopodium quinoa HOM05D001724 ORTHO05D007284 9.2e-64 248.1 290 49.7
SMO133G0033 Selaginella moellendorffii HOM05D001724 ORTHO05D007284 4.3e-61 239.2 225 51.6
SEGI_07558 Sequoiadendron giganteum HOM05D001724 ORTHO05D007284 1.6e-52 210.7 168 61.3
CBR_g12604 Chara braunii HOM05D001724 ORTHO05D007284 5.8e-50 202.2 227 47.1
FvH4_3g43140 Fragaria vesca HOM05D001724 ORTHO05D007284 5.6e-37 159.1 208 44.2
Sc03g0011370 Simmondsia chinensis HOM05D001724 ORTHO05D007284 2.2e-33 147.1 268 34.7
FvH4_3g43160 Fragaria vesca HOM05D001724 ORTHO05D007284 1.3e-30 137.9 128 56.2
CARHR087770 Cardamine hirsuta HOM05D001724 ORTHO05D007284 3.4e-26 123.2 86 62.8
Cre50.g761447 Chlamydomonas reinhardtii HOM05D001724 ORTHO05D007284 1.0e-22 111.7 234 30.8
Medtr5g095140 Medicago truncatula HOM05D001724 ORTHO05D007284 2.2e-17 94.0 97 51.5
FvH4_3g42580 Fragaria vesca HOM05D000002 ORTHO05D000001 5.1e-14 82.8 67 59.7
SEGI_00859 Sequoiadendron giganteum HOM05D001724 ORTHO05D007284 1.3e-12 78.2 72 55.6
Pp3s46_10 Physcomitrium patens HOM05D001724 ORTHO05D007284 3.7e-12 76.6 174 29.3
Rhsim03G0025600 Rhododendron simsii HOM05D001724 ORTHO05D021162 6.3e-12 75.9 84 51.2
SEGI_36284 Sequoiadendron giganteum HOM05D001724 ORTHO05D007284 2.4e-11 73.9 60 60.0
FvH4_3g43190 Fragaria vesca HOM05D001724 ORTHO05D007284 3.1e-11 73.6 54 55.6
Rhsim03G0026500 Rhododendron simsii HOM05D001724 ORTHO05D007284 6.9e-11 72.4 93 47.3
SEGI_06610 Sequoiadendron giganteum HOM05D001724 ORTHO05D007284 6.5e-09 65.9 62 54.8
Oeu049377.1 Olea europaea HOM05D001724 ORTHO05D007284 1.6e-07 61.2 77 39.0


User provided reference genes

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