Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE01G0132 Ceratophyllum demersum HOM05D004944 ORTHO05D005989 0.0e+00 1283.5 645 100.0
TAR636G1724 Trochodendron aralioides HOM05D004944 ORTHO05D005989 1.0e-173 614.4 652 53.7
Hma1.2p1_0184F.1_g081120 Hydrangea macrophylla HOM05D004944 ORTHO05D005989 1.5e-172 610.5 653 53.1
Dinv32057 Davidia involucrata HOM05D004944 ORTHO05D005989 6.8e-170 601.7 650 51.7
Nn7g36468 Nelumbo nucifera HOM05D004944 ORTHO05D005989 6.3e-168 595.1 630 52.9
Actinidia06272 Actinidia chinensis HOM05D004944 ORTHO05D005989 3.1e-167 592.8 650 51.5
QL04p013327 Quercus lobata HOM05D004944 ORTHO05D005989 1.0e-162 577.8 635 50.1
Atru.chr11.2502 Acer truncatum HOM05D004944 ORTHO05D005989 2.3e-162 576.6 649 50.8
GSVIVG01000850001 Vitis vinifera HOM05D004944 ORTHO05D005989 6.8e-162 575.1 653 51.3
Aqoxy1G00293 Aquilegia oxysepala HOM05D004944 ORTHO05D005989 1.5e-161 573.9 656 49.5
Sed0005559 Sechium edule HOM05D004944 ORTHO05D005989 1.7e-160 570.5 620 51.1
TWI15G1108 Tripterygium wilfordii HOM05D004944 ORTHO05D005989 2.2e-160 570.1 649 49.9
Medtr3g022850 Medicago truncatula HOM05D004944 ORTHO05D005989 8.3e-160 568.2 639 51.2
CiPaw.13G010200 Carya illinoinensis HOM05D004944 ORTHO05D005989 1.1e-159 567.8 635 52.4
PGR031G0610 Punica granatum HOM05D004944 ORTHO05D005989 4.1e-159 565.8 622 51.3
Glyma.11G150100 Glycine max HOM05D004944 ORTHO05D005989 1.2e-158 564.3 616 51.8
Ciclev10030882m.g Citrus clementina HOM05D004944 ORTHO05D005989 1.3e-157 560.8 652 49.5
Haze_03113 Corylus avellana HOM05D004944 ORTHO05D005989 1.3e-157 560.8 656 48.5
MD02G1296200 Malus domestica HOM05D004944 ORTHO05D005989 1.1e-156 557.8 649 49.3
MELO3C012446.2 Cucumis melo HOM05D004944 ORTHO05D005989 5.6e-156 555.4 617 50.4
CANSAT80G2771 Cannabis sativa HOM05D004944 ORTHO05D005989 2.3e-154 550.1 646 48.0
VMungo1080G1012 Vigna mungo HOM05D004944 ORTHO05D005989 2.3e-154 550.1 630 51.4
Lj3g0016020 Lotus japonicus HOM05D004944 ORTHO05D005989 6.8e-154 548.5 642 50.3
Cc02_g29470 Coffea canephora HOM05D004944 ORTHO05D005989 8.9e-154 548.1 673 48.6
Potri.003G202300 Populus trichocarpa HOM05D004944 ORTHO05D005989 8.3e-152 541.6 649 48.8
Duzib128G1953 Durio zibethinus HOM05D004944 ORTHO05D005989 1.1e-151 541.2 626 50.0
HanXRQChr05g0145061 Helianthus annuus HOM05D004944 ORTHO05D005989 4.1e-151 539.3 625 50.4
Gorai.013G015500 Gossypium raimondii HOM05D004944 ORTHO05D005989 7.0e-151 538.5 623 49.8
Sopen01g030310 Solanum pennellii HOM05D004944 ORTHO05D005989 9.2e-151 538.1 651 48.1
Lsat_1_v5_gn_9_47141 Lactuca sativa HOM05D004944 ORTHO05D005989 1.6e-150 537.3 612 50.7
SalBow2G1212 Salvia bowleyana HOM05D004944 ORTHO05D005989 1.6e-150 537.3 654 46.6
Prupe.2G028500 Prunus persica HOM05D004944 ORTHO05D005989 3.5e-150 536.2 649 49.3
MBI17_g24522_MAGBIO Magnolia biondii HOM05D004944 ORTHO05D005989 6.0e-150 535.4 598 53.5
Eucgr.G03259 Eucalyptus grandis HOM05D004944 ORTHO05D005989 7.8e-150 535.0 636 48.6
PSO782G0837 Papaver somniferum HOM05D004944 ORTHO05D005989 7.8e-150 535.0 625 48.3
Thecc.10G005400 Theobroma cacao HOM05D004944 ORTHO05D005989 1.3e-149 534.3 632 49.4
RcHm_v2.0_Chr1g0319541 Rosa chinensis HOM05D004944 ORTHO05D005989 3.0e-149 533.1 647 48.8
SGA_v2.0_scaffold5G02935 Striga asiatica HOM05D004944 ORTHO05D005989 5.0e-149 532.3 639 46.8
Sabra03G0149500 Salix brachista HOM05D004944 ORTHO05D005989 1.1e-148 531.2 690 45.8
Migut.N01817 Erythranthe guttata HOM05D004944 ORTHO05D005989 1.9e-148 530.4 676 44.2
Gohir.D13G014300 Gossypium hirsutum HOM05D004944 ORTHO05D005989 2.5e-148 530.0 623 49.3
FAN03G3505 Fragaria x ananassa HOM05D004944 ORTHO05D005989 7.3e-148 528.5 664 46.8
HPP92_001459 Vanilla planifolia HOM05D004944 ORTHO05D005989 1.6e-147 527.3 611 50.6
FAN06G2455 Fragaria x ananassa HOM05D004944 ORTHO05D005989 2.1e-147 526.9 649 47.5
arahy.Tifrunner.gnm1.ann1.L5CKR4 Arachis hypogaea HOM05D004944 ORTHO05D005989 3.6e-147 526.2 632 49.2
FvH4_7g02220 Fragaria vesca HOM05D004944 ORTHO05D005989 3.6e-147 526.2 649 47.3
AL7G21230 Arabidopsis lyrata HOM05D004944 ORTHO05D005989 2.3e-146 523.5 648 47.1
Carub.0007s0968 Capsella rubella HOM05D004944 ORTHO05D005989 8.9e-146 521.5 646 47.7
AT4G30870 Arabidopsis thaliana HOM05D004944 ORTHO05D005989 2.0e-145 520.4 640 48.1
THA.LOC104819120 Tarenaya hassleriana HOM05D004944 ORTHO05D005989 2.0e-145 520.4 653 47.3
arahy.Tifrunner.gnm1.ann1.YV81B1 Arachis hypogaea HOM05D004944 ORTHO05D005989 7.5e-145 518.5 659 47.0
BraA09t38244Z Brassica rapa HOM05D004944 ORTHO05D005989 7.5e-145 518.5 621 48.6
A09p26720 Brassica napus HOM05D004944 ORTHO05D005989 1.3e-144 517.7 618 49.2
PSO339G0509 Papaver somniferum HOM05D004944 ORTHO05D005989 2.2e-144 516.9 607 48.8
CAN.G410.46 Capsicum annuum HOM05D004944 ORTHO05D005989 3.7e-144 516.2 657 46.7
Cfa010847 Carpinus fangiana HOM05D004944 ORTHO05D005989 3.7e-144 516.2 628 47.5
BcaB01g01761 Brassica carinata HOM05D004944 ORTHO05D005989 1.9e-143 513.8 622 48.4
CARHR238770 Cardamine hirsuta HOM05D004944 ORTHO05D005989 3.2e-143 513.1 644 47.7
PSO384G2132 Papaver somniferum HOM05D004944 ORTHO05D005989 5.4e-143 512.3 607 48.4
FAN01G0470 Fragaria x ananassa HOM05D004944 ORTHO05D005989 7.1e-143 511.9 695 44.6
Sp6g04870 Schrenkiella parvula HOM05D004944 ORTHO05D005989 2.1e-142 510.4 645 47.9
BcaC04g21249 Brassica carinata HOM05D004944 ORTHO05D005989 2.7e-142 510.0 623 48.2
C09p33850 Brassica napus HOM05D004944 ORTHO05D005989 2.7e-142 510.0 623 48.2
BolC9t56223H Brassica oleracea HOM05D004944 ORTHO05D005989 2.7e-142 510.0 623 48.2
Thhalv10024629m.g Eutrema salsugineum HOM05D004944 ORTHO05D005989 6.0e-142 508.8 646 48.0
TPR.G18800 Trifolium pratense HOM05D004944 ORTHO05D005989 2.3e-141 506.9 639 47.6
ClCG05G020810 Citrullus lanatus HOM05D004944 ORTHO05D005989 3.9e-141 506.1 651 45.6
COL.COLO4_25841 Corchorus olitorius HOM05D004944 ORTHO05D005989 8.6e-141 505.0 618 48.4
SEGI_11905 Sequoiadendron giganteum HOM05D004944 ORTHO05D005989 1.1e-140 504.6 633 46.9
Rhsim07G0062200 Rhododendron simsii HOM05D004944 ORTHO05D005989 3.6e-139 499.6 808 41.2
Aa31LG2G19510 Aethionema arabicum HOM05D004944 ORTHO05D005989 1.8e-138 497.3 646 45.2
Lalb_Chr04g0263921 Lupinus albus HOM05D004944 ORTHO05D005989 2.4e-138 496.9 561 50.6
PSO135G0630 Papaver somniferum HOM05D004944 ORTHO05D005989 3.0e-133 479.9 606 45.9
Nitab4.5_0006307g0060 Nicotiana tabacum HOM05D004944 ORTHO05D005989 1.1e-132 478.0 549 50.6
Carub.0007s3598 Capsella rubella HOM05D004944 ORTHO05D005989 1.2e-131 474.6 605 46.6
Hund15708 Selenicereus undatus HOM05D004944 ORTHO05D005989 2.1e-131 473.8 601 46.6
ECA232G0518 Erigeron canadensis HOM05D004944 ORTHO05D005989 6.2e-131 472.2 554 49.3
DCAR_009210 Daucus carota HOM05D004944 ORTHO05D005989 1.8e-130 470.7 615 46.5
AUR62026814 Chenopodium quinoa HOM05D004944 ORTHO05D005989 3.1e-130 469.9 633 45.7
Cpa.g.sc197.13 Carica papaya HOM05D004944 ORTHO05D005989 5.2e-130 469.2 610 47.5
EL10Ac2g02867 Beta vulgaris HOM05D004944 ORTHO05D005989 1.3e-128 464.5 601 45.6
MD07G1077800 Malus domestica HOM05D004944 ORTHO05D005989 3.2e-127 459.9 523 50.1
Thhalv10024809m.g Eutrema salsugineum HOM05D004944 ORTHO05D005989 5.4e-127 459.1 608 46.5
AUR62037239 Chenopodium quinoa HOM05D004944 ORTHO05D005989 2.1e-126 457.2 603 43.9
Cfa010848 Carpinus fangiana HOM05D004944 ORTHO05D005989 7.8e-126 455.3 586 45.9
Nitab4.5_0000316g0180 Nicotiana tabacum HOM05D004944 ORTHO05D005989 4.3e-124 449.5 532 50.6
Manes.04G164000 Manihot esculenta HOM05D004944 ORTHO05D005989 2.4e-119 433.7 528 50.0
SMO337G0105 Selaginella moellendorffii HOM05D004944 ORTHO05D005989 2.5e-116 423.7 644 40.2
RcHm_v2.0_Chr3g0488831 Rosa chinensis HOM05D004944 ORTHO05D005989 9.6e-116 421.8 518 48.5
Mapoly0005s0161 Marchantia polymorpha HOM05D004944 ORTHO05D005989 3.2e-111 406.8 619 40.4
Phvul.005G033000 Phaseolus vulgaris HOM05D004944 ORTHO05D005989 4.2e-111 406.4 614 42.0
AagrBONN_evm.TU.Sc2ySwM_228.3522 Anthoceros agrestis HOM05D004944 ORTHO05D005989 4.3e-108 396.4 611 39.8
Pp3c16_12330 Physcomitrium patens HOM05D004944 ORTHO05D005989 1.8e-106 391.0 636 40.3
Os01g0948100 Oryza sativa ssp. japonica HOM05D004944 ORTHO05D005989 5.3e-106 389.4 541 44.0
CsaV3_5G036480 Cucumis sativus L. HOM05D004944 ORTHO05D005989 1.7e-104 384.4 475 46.3
Prupe.7G020900 Prunus persica HOM05D004944 ORTHO05D005989 1.6e-102 377.9 520 45.2
AT5G39770 Arabidopsis thaliana HOM05D004944 ORTHO05D005989 1.6e-99 367.9 572 43.2
Gohir.A13G013200 Gossypium hirsutum HOM05D004944 ORTHO05D005989 2.4e-98 364.0 480 46.0
Solyc01g068340.3 Solanum lycopersicum HOM05D004944 ORTHO05D005989 6.5e-96 355.9 510 44.1
Psat5g213680 Pisum sativum HOM05D004944 ORTHO05D005989 3.4e-81 307.0 460 41.5
Zm00001eb141330 Zea mays HOM05D004944 ORTHO05D005989 8.0e-78 295.8 482 41.9
MBI17_g33308_MAGBIO Magnolia biondii HOM05D004944 ORTHO05D005989 2.6e-76 290.8 238 60.9
CBR_g44528 Chara braunii HOM05D004944 ORTHO05D005989 1.5e-68 265.0 881 27.7
vmacro13722 Vaccinium macrocarpon HOM05D004944 ORTHO05D005989 2.6e-68 264.2 225 60.0
Sc10g0004240 Simmondsia chinensis HOM05D004944 ORTHO05D005989 3.7e-67 260.4 196 64.3
Zm00001eb141350 Zea mays HOM05D004944 ORTHO05D005989 2.4e-66 257.7 249 54.6
Peaxi162Scf00309g00015 Petunia axillaris HOM05D004944 ORTHO05D005989 1.0e-64 252.3 223 57.4
unitig_744.g24021 Utricularia gibba HOM05D004944 ORTHO05D005989 1.2e-62 245.4 724 30.2
Sc10g0004230 Simmondsia chinensis HOM05D004944 ORTHO05D005989 1.0e-61 242.3 462 35.5
FAN10G4268 Fragaria x ananassa HOM05D004944 ORTHO05D005989 2.8e-59 234.2 224 56.2
vmacro13724 Vaccinium macrocarpon HOM05D004944 ORTHO05D005989 2.9e-48 197.6 146 68.5
ATR0721G036 Amborella trichopoda HOM05D004944 ORTHO05D005989 3.0e-45 187.6 145 64.1
Solyc01g068350.3 Solanum lycopersicum HOM05D004944 ORTHO05D005989 7.5e-44 183.0 142 61.3
CSS0031841 Camellia sinensis var. sinensis HOM05D004944 ORTHO05D005989 1.2e-41 175.6 164 57.3
Peaxi162Scf00309g00016 Petunia axillaris HOM05D004944 ORTHO05D005989 1.7e-40 171.8 135 62.2
ATR0721G017 Amborella trichopoda HOM05D004944 ORTHO05D005989 1.9e-39 168.3 347 34.3
Lj9A645G78 Lonicera japonica HOM05D004944 ORTHO05D005989 1.9e-39 168.3 301 38.9
BcaNung04417 Brassica carinata HOM05D000343 ORTHO05D003187 1.4e-37 162.2 200 46.5
Ca_04546_v3 Cicer arietinum L. HOM05D004944 ORTHO05D005989 1.4e-37 162.2 319 37.9
FAN01G1245 Fragaria x ananassa HOM05D004944 ORTHO05D005989 3.2e-34 151.0 145 55.2
AUR62002442 Chenopodium quinoa HOM05D004944 ORTHO05D005989 7.0e-34 149.8 139 53.2
vmacro13723 Vaccinium macrocarpon HOM05D004944 ORTHO05D005989 1.5e-31 142.1 107 63.6
PRCOL_00004679 Prasinoderma coloniale HOM05D004944 ORTHO05D005989 4.3e-31 140.6 235 35.3
CSS0047173 Camellia sinensis var. sinensis HOM05D004944 ORTHO05D005989 2.1e-30 138.3 118 58.5
Lj9C645T11 Lonicera japonica HOM05D004944 ORTHO05D005989 2.8e-30 137.9 102 62.7
Lj9A645G77 Lonicera japonica HOM05D004944 ORTHO05D005989 1.1e-29 136.0 122 55.7
Sp5g22360 Schrenkiella parvula HOM05D004944 ORTHO05D005989 1.1e-29 136.0 134 54.5
HPP92_001442 Vanilla planifolia HOM05D004944 ORTHO05D005989 5.8e-28 130.2 115 57.4
MCO01G407 Micromonas commoda HOM05D004944 ORTHO05D005989 3.7e-27 127.5 614 25.7
Prupe.2G032400 Prunus persica HOM05D004944 ORTHO05D005989 1.6e-25 122.1 148 47.3
Haze_26725 Corylus avellana HOM05D004944 ORTHO05D005989 7.8e-25 119.8 297 29.3
SHI03969 Sapria himalayana HOM05D004944 ORTHO05D005989 8.6e-24 116.3 106 57.5
CSS0009317 Camellia sinensis var. sinensis HOM05D004944 ORTHO05D005989 2.0e-20 105.1 82 59.8
Cre12.g555050 Chlamydomonas reinhardtii HOM05D004944 ORTHO05D005989 3.2e-18 97.8 189 34.4
CSS0024385 Camellia sinensis var. sinensis HOM05D004944 ORTHO05D005989 5.4e-18 97.1 91 53.8
Lj9A645G79 Lonicera japonica HOM05D004944 ORTHO05D005989 2.7e-17 94.7 75 60.0
Peaxi162Scf00309g00011 Petunia axillaris HOM05D004944 ORTHO05D005989 7.3e-15 86.7 53 77.4
RcHm_v2.0_Chr4g0391951 Rosa chinensis HOM05D004944 ORTHO05D005989 4.7e-14 84.0 97 43.3
SHI03976 Sapria himalayana HOM05D004944 ORTHO05D005989 4.7e-14 84.0 56 66.1
Prupe.2G099800 Prunus persica HOM05D004944 ORTHO05D005989 8.1e-14 83.2 251 27.9
Psat5g213600 Pisum sativum HOM05D004944 ORTHO05D005989 4.4e-12 77.4 146 36.3
Oeu006103.1 Olea europaea HOM05D004944 ORTHO05D005989 1.4e-10 72.4 121 38.0
SHI03965 Sapria himalayana HOM05D004944 ORTHO05D005989 3.3e-07 61.2 64 46.9
Lalb_Chr04g0263911 Lupinus albus HOM05D004944 ORTHO05D005989 2.8e-06 58.2 61 44.3


User provided reference genes

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