Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g57132 Chara braunii HOM05D000251 ORTHO05D007889 0.0e+00 2337.0 1239 100.0
AagrBONN_evm.TU.Sc2ySwM_344.5190 Anthoceros agrestis HOM05D000251 ORTHO05D007889 1.6e-107 395.6 1003 32.4
QL10p022316 Quercus lobata HOM05D000251 ORTHO05D007889 7.8e-99 366.7 1005 31.7
Pp3c6_280 Physcomitrium patens HOM05D000251 ORTHO05D007889 6.6e-98 363.6 1064 31.3
PGR044G2008 Punica granatum HOM05D000251 ORTHO05D007889 1.9e-97 362.1 1012 31.4
Aqoxy3G00409 Aquilegia oxysepala HOM05D000251 ORTHO05D007889 9.5e-97 359.8 1007 32.3
Rhsim08G0149100 Rhododendron simsii HOM05D000251 ORTHO05D007889 3.1e-95 354.8 1032 31.9
MD14G1219700 Malus domestica HOM05D000251 ORTHO05D007889 2.0e-94 352.1 1034 31.8
Lj4g0022759 Lotus japonicus HOM05D000251 ORTHO05D007889 2.6e-94 351.7 1008 31.2
Dinv36870 Davidia involucrata HOM05D000251 ORTHO05D007889 4.4e-94 350.9 1005 31.6
Prupe.5G214300 Prunus persica HOM05D000251 ORTHO05D007889 9.9e-94 349.7 1012 31.6
Carub.0006s2087 Capsella rubella HOM05D000251 ORTHO05D007889 1.3e-93 349.4 1034 30.5
Lj9C433G11 Lonicera japonica HOM05D000251 ORTHO05D007889 1.7e-93 349.0 1022 31.7
Cc04_g07720 Coffea canephora HOM05D000251 ORTHO05D007889 6.4e-93 347.1 1013 31.3
DCAR_015126 Daucus carota HOM05D000251 ORTHO05D007889 1.9e-92 345.5 1023 30.5
Nn4g23656 Nelumbo nucifera HOM05D000251 ORTHO05D007889 3.2e-92 344.7 1161 29.5
Thecc.03G114900 Theobroma cacao HOM05D000251 ORTHO05D007889 3.2e-92 344.7 1012 31.3
TAR622G0769 Trochodendron aralioides HOM05D000251 ORTHO05D007889 4.1e-92 344.4 1014 31.4
CiPaw.15G123200 Carya illinoinensis HOM05D000251 ORTHO05D007889 5.4e-92 344.0 1159 29.8
COL.COLO4_32187 Corchorus olitorius HOM05D000251 ORTHO05D007889 7.1e-92 343.6 1082 29.9
VMungo1215G2774 Vigna mungo HOM05D000251 ORTHO05D007889 2.7e-91 341.7 1076 31.6
Peaxi162Scf00017g03036 Petunia axillaris HOM05D000251 ORTHO05D007889 3.5e-91 341.3 1037 31.1
Duzib205G0552 Durio zibethinus HOM05D000251 ORTHO05D007889 4.6e-91 340.9 1009 30.2
arahy.Tifrunner.gnm1.ann1.ESZ5GR Arachis hypogaea HOM05D000251 ORTHO05D007889 1.0e-90 339.7 1011 31.0
CANSAT80G2803 Cannabis sativa HOM05D000251 ORTHO05D007889 1.0e-90 339.7 1014 31.9
Ca_02522_v3 Cicer arietinum L. HOM05D000251 ORTHO05D007889 1.0e-90 339.7 1040 31.2
MD06G1209200 Malus domestica HOM05D000251 ORTHO05D007889 1.3e-90 339.3 1030 31.9
Sed0011411 Sechium edule HOM05D000251 ORTHO05D007889 2.3e-90 338.6 1018 30.8
Solyc03g114410.3 Solanum lycopersicum HOM05D000251 ORTHO05D007889 3.0e-90 338.2 1098 30.3
Ciclev10018692m.g Citrus clementina HOM05D000251 ORTHO05D007889 5.1e-90 337.4 1012 31.3
CAN.G781.3 Capsicum annuum HOM05D000251 ORTHO05D007889 6.6e-90 337.0 1083 29.8
PSO478G4362 Papaver somniferum HOM05D000251 ORTHO05D007889 6.6e-90 337.0 1049 30.7
FAN18G2230 Fragaria x ananassa HOM05D000251 ORTHO05D007889 8.6e-90 336.7 1019 30.9
AL6G34270 Arabidopsis lyrata HOM05D000251 ORTHO05D007889 1.5e-89 335.9 999 30.9
Nitab4.5_0000646g0050 Nicotiana tabacum HOM05D000251 ORTHO05D007889 1.5e-89 335.9 1019 30.4
ATR0723G093 Amborella trichopoda HOM05D000251 ORTHO05D007889 1.9e-89 335.5 1008 30.6
EL10Ac5g11229 Beta vulgaris HOM05D000251 ORTHO05D007889 1.9e-89 335.5 1007 30.3
CSS0040641 Camellia sinensis var. sinensis HOM05D000251 ORTHO05D007889 2.5e-89 335.1 1010 30.9
CsaV3_1G003490 Cucumis sativus L. HOM05D000251 ORTHO05D007889 5.6e-89 334.0 1023 30.3
Psat4g045640 Pisum sativum HOM05D000251 ORTHO05D007889 5.6e-89 334.0 1012 30.9
Hund02531 Selenicereus undatus HOM05D000251 ORTHO05D007889 5.6e-89 334.0 1023 30.2
THA.LOC104819385 Tarenaya hassleriana HOM05D000251 ORTHO05D007889 1.2e-88 332.8 1005 31.7
Cfa019845 Carpinus fangiana HOM05D000251 ORTHO05D007889 1.6e-88 332.4 1047 31.2
Lalb_Chr12g0197521 Lupinus albus HOM05D000251 ORTHO05D007889 1.6e-88 332.4 1015 30.9
Sopen03g033510 Solanum pennellii HOM05D000251 ORTHO05D007889 2.1e-88 332.0 1098 30.1
arahy.Tifrunner.gnm1.ann1.MAJ7P0 Arachis hypogaea HOM05D000251 ORTHO05D007889 3.6e-88 331.3 1087 30.5
RcHm_v2.0_Chr7g0184311 Rosa chinensis HOM05D000251 ORTHO05D007889 3.6e-88 331.3 1027 31.5
Migut.G01282 Erythranthe guttata HOM05D000251 ORTHO05D007889 8.1e-88 330.1 1006 30.8
Glyma.05G015200 Glycine max HOM05D000251 ORTHO05D007889 8.1e-88 330.1 1011 31.7
PSO017G5760 Papaver somniferum HOM05D000251 ORTHO05D007889 8.1e-88 330.1 1000 31.1
Gorai.003G106300 Gossypium raimondii HOM05D000251 ORTHO05D007889 1.1e-87 329.7 1013 31.3
AT5G23080 Arabidopsis thaliana HOM05D000251 ORTHO05D007889 1.4e-87 329.3 995 31.2
FvH4_5g12911 Fragaria vesca HOM05D000251 ORTHO05D007889 1.4e-87 329.3 1077 30.0
Atru.chr9.705 Acer truncatum HOM05D000251 ORTHO05D007889 1.8e-87 328.9 1007 31.2
FAN13G2548 Fragaria x ananassa HOM05D000251 ORTHO05D000414 1.8e-87 328.9 1019 30.6
Gohir.D03G100900 Gossypium hirsutum HOM05D000251 ORTHO05D007889 1.8e-87 328.9 1018 31.1
Sp2g24040 Schrenkiella parvula HOM05D000251 ORTHO05D007889 3.1e-87 328.2 1045 30.8
Actinidia31039 Actinidia chinensis HOM05D000251 ORTHO05D007889 4.0e-87 327.8 1001 31.7
FAN18G3790 Fragaria x ananassa HOM05D000251 ORTHO05D007889 6.9e-87 327.0 1004 31.0
Nitab4.5_0004342g0020 Nicotiana tabacum HOM05D000251 ORTHO05D007889 6.9e-87 327.0 1122 30.2
ClCG06G015150 Citrullus lanatus HOM05D000251 ORTHO05D007889 8.9e-87 326.6 1096 30.8
Potri.012G058100 Populus trichocarpa HOM05D000251 ORTHO05D007889 8.9e-87 326.6 1060 30.8
A03p46430 Brassica napus HOM05D000251 ORTHO05D007889 4.4e-86 324.3 1000 30.8
BraA03t13769Z Brassica rapa HOM05D000251 ORTHO05D007889 5.8e-86 323.9 1051 30.4
Medtr4g112420 Medicago truncatula HOM05D000251 ORTHO05D007889 5.8e-86 323.9 1019 30.3
Thhalv10003608m.g Eutrema salsugineum HOM05D000251 ORTHO05D007889 9.9e-86 323.2 1054 30.6
Aa31LG11G2570 Aethionema arabicum HOM05D000251 ORTHO05D007889 1.3e-85 322.8 1047 30.7
Gohir.A03G074400 Gossypium hirsutum HOM05D000251 ORTHO05D007889 1.3e-85 322.8 1008 30.4
TWI81G0067 Tripterygium wilfordii HOM05D000251 ORTHO05D007889 1.3e-85 322.8 1108 29.6
SGA_v2.0_scaffold283G46981 Striga asiatica HOM05D000251 ORTHO05D007889 2.9e-85 321.6 1009 30.6
Glyma.17G123700 Glycine max HOM05D000251 ORTHO05D007889 4.9e-85 320.9 1006 31.0
C07p44450 Brassica napus HOM05D000251 ORTHO05D007889 6.4e-85 320.5 1055 30.2
BolC7t44966H Brassica oleracea HOM05D000251 ORTHO05D007889 8.4e-85 320.1 1055 30.2
Eucgr.K02644 Eucalyptus grandis HOM05D000251 ORTHO05D007889 1.4e-84 319.3 1013 30.5
GSVIVG01008206001 Vitis vinifera HOM05D000251 ORTHO05D007889 1.4e-84 319.3 1006 30.6
CDE08G0099 Ceratophyllum demersum HOM05D000251 ORTHO05D007889 2.4e-84 318.5 1002 29.2
AUR62032169 Chenopodium quinoa HOM05D000251 ORTHO05D007889 3.2e-84 318.2 1005 28.7
C09p07920 Brassica napus HOM05D000251 ORTHO05D007889 5.4e-84 317.4 1002 30.5
AUR62036928 Chenopodium quinoa HOM05D000251 ORTHO05D007889 5.4e-84 317.4 1012 29.4
Sabra12G0041800 Salix brachista HOM05D000251 ORTHO05D007889 9.3e-84 316.6 1098 30.4
BcaC04g23479 Brassica carinata HOM05D000251 ORTHO05D007889 2.7e-83 315.1 996 30.4
BolC9t53705H Brassica oleracea HOM05D000251 ORTHO05D007889 2.7e-83 315.1 996 30.4
Os06g0489200 Oryza sativa ssp. japonica HOM05D000251 ORTHO05D007889 3.5e-83 314.7 1034 28.9
HanXRQChr05g0157761 Helianthus annuus HOM05D000251 ORTHO05D007889 6.0e-83 313.9 1012 29.8
Manes.05G117300 Manihot esculenta HOM05D000251 ORTHO05D007889 6.0e-83 313.9 847 31.5
ECA246G2449 Erigeron canadensis HOM05D000251 ORTHO05D007889 7.8e-83 313.5 1026 29.5
A09p07070 Brassica napus HOM05D000251 ORTHO05D007889 2.3e-82 312.0 1007 30.5
BraA09t36355Z Brassica rapa HOM05D000251 ORTHO05D007889 2.3e-82 312.0 1002 30.8
Lsat_1_v5_gn_5_24161 Lactuca sativa HOM05D000251 ORTHO05D007889 5.1e-82 310.8 1075 29.7
Sc10g0009620 Simmondsia chinensis HOM05D000251 ORTHO05D007889 4.3e-81 307.8 843 31.4
Rhsim08G0139200 Rhododendron simsii HOM05D000251 ORTHO05D007889 9.6e-81 306.6 851 31.3
TPR.G2793 Trifolium pratense HOM05D000251 ORTHO05D007889 1.3e-80 306.2 1037 29.9
SMO358G0348 Selaginella moellendorffii HOM05D000251 ORTHO05D007889 4.8e-80 304.3 1033 30.2
vmacro17646 Vaccinium macrocarpon HOM05D000251 ORTHO05D007889 3.1e-79 301.6 1095 29.9
MELO3C017274.2 Cucumis melo HOM05D000251 ORTHO05D007889 2.6e-78 298.5 1044 29.3
Cpa.g.sc13.78 Carica papaya HOM05D000251 ORTHO05D007889 1.1e-76 293.1 858 30.8
BcaB04g19889 Brassica carinata HOM05D000251 ORTHO05D007889 2.4e-76 292.0 1003 29.4
Mapoly0043s0012 Marchantia polymorpha HOM05D000251 ORTHO05D007889 4.2e-76 291.2 1042 29.6
SalBow2G1753 Salvia bowleyana HOM05D000251 ORTHO05D007889 2.1e-75 288.9 1089 28.9
unitig_736.g22471 Utricularia gibba HOM05D000251 ORTHO05D007889 6.7e-74 283.9 1012 28.9
Haze_18572 Corylus avellana HOM05D000251 ORTHO05D007889 6.4e-69 267.3 1003 29.6
Ah.02g114420 Amaranthus hybridus HOM05D000251 ORTHO05D007889 1.3e-64 253.1 935 28.7
Phvul.003G179400 Phaseolus vulgaris HOM05D000251 ORTHO05D007889 3.8e-61 241.5 942 29.0
SEGI_18733 Sequoiadendron giganteum HOM05D000251 ORTHO05D007889 1.3e-50 206.5 544 29.4
Hma1.2p1_0595F.1_g186100 Hydrangea macrophylla HOM05D000251 ORTHO05D007889 2.5e-44 185.7 161 56.5
Nn039s41709 Nelumbo nucifera HOM05D000251 ORTHO05D007889 5.7e-41 174.5 537 29.6
HPP92_003115 Vanilla planifolia HOM05D000251 ORTHO05D007889 4.5e-38 164.9 716 27.5
CARHR190450 Cardamine hirsuta HOM05D000251 ORTHO05D007889 5.9e-38 164.5 625 29.6
MCO14G468 Micromonas commoda HOM05D000251 ORTHO05D007889 2.2e-37 162.5 837 26.5
Cre13.g568700 Chlamydomonas reinhardtii HOM05D000251 ORTHO05D007889 5.7e-33 147.9 149 52.3
Zm00001eb382170 Zea mays HOM05D000251 ORTHO05D007889 8.5e-29 134.0 501 27.7
Hma1.2p1_0595F.1_g186110 Hydrangea macrophylla HOM05D000251 ORTHO05D007889 3.3e-25 122.1 351 29.6
Ah.02g114430 Amaranthus hybridus HOM05D000169 ORTHO05D000542 6.5e-21 107.8 77 64.9
Cfa026338 Carpinus fangiana HOM05D000251 ORTHO05D007889 5.5e-20 104.8 145 44.8
SHI18972 Sapria himalayana HOM05D000251 ORTHO05D007889 1.2e-19 103.6 76 60.5
CiPaw.15G123400 Carya illinoinensis HOM05D000251 ORTHO05D007889 2.5e-12 79.3 60 58.3
GSVIVG01008210001 Vitis vinifera HOM05D000251 ORTHO05D007889 1.0e-10 73.9 73 50.7
Actinidia16061 Actinidia chinensis HOM05D000251 ORTHO05D007889 4.4e-09 68.6 180 31.1
PRCOL_00003511 Prasinoderma coloniale HOM05D005511 ORTHO05D006616 1.8e-07 63.2 141 34.0
CANSAT25G2351 Cannabis sativa HOM05D005511 ORTHO05D006616 3.5e-06 58.9 96 35.4
BcaC06g33188 Brassica carinata HOM05D000251 ORTHO05D007889 7.8e-06 57.8 88 44.3


User provided reference genes

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