Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g48179 Chara braunii HOM05D008561 ORTHO05D014181 8.0e-270 933.3 525 100.0
CBR_g19068 Chara braunii HOM05D008561 ORTHO05D014181 1.3e-102 377.9 316 66.8
CBR_g49962 Chara braunii HOM05D008561 ORTHO05D014181 4.2e-93 346.3 354 62.4
CBR_g37124 Chara braunii HOM05D008561 ORTHO05D014181 6.7e-91 339.0 279 72.0
CBR_g53721 Chara braunii HOM05D008561 ORTHO05D014181 1.2e-84 318.2 348 59.2
CBR_g46289 Chara braunii HOM05D008561 ORTHO05D014181 2.7e-84 317.0 361 58.2
CBR_g74686 Chara braunii HOM05D008561 ORTHO05D014181 4.6e-84 316.2 300 59.3
CBR_g24259 Chara braunii HOM05D008561 ORTHO05D014181 9.0e-80 302.0 334 59.0
CBR_g31177 Chara braunii HOM05D008561 ORTHO05D014181 5.7e-74 282.7 365 54.8
CBR_g82 Chara braunii HOM05D008561 ORTHO05D014181 9.7e-66 255.4 319 56.1
CBR_g4087 Chara braunii HOM05D008561 ORTHO05D014181 4.8e-65 253.1 357 49.6
CBR_g4619 Chara braunii HOM05D008561 ORTHO05D014181 6.5e-62 242.7 250 60.4
CBR_g17140 Chara braunii HOM05D008561 ORTHO05D014181 1.0e-59 235.3 337 49.0
CBR_g34663 Chara braunii HOM05D008561 ORTHO05D014181 6.7e-59 232.6 243 57.2
CBR_g52137 Chara braunii HOM05D008561 ORTHO05D014181 3.1e-56 223.8 290 53.1
AagrBONN_evm.TU.Sc2ySwM_228.5146 Anthoceros agrestis HOM05D001354 ORTHO05D007486 7.0e-56 222.6 178 71.3
Pp3c8_7200 Physcomitrium patens HOM05D001354 ORTHO05D007486 7.2e-53 212.6 184 64.1
Mapoly0005s0040 Marchantia polymorpha HOM05D001354 ORTHO05D007486 1.0e-51 208.8 178 64.0
MELO3C024550.2 Cucumis melo HOM05D001354 ORTHO05D007486 3.5e-47 193.7 185 58.4
Thecc.05G090900 Theobroma cacao HOM05D001354 ORTHO05D007486 3.5e-47 193.7 186 58.6
CAN.G397.64 Capsicum annuum HOM05D001354 ORTHO05D007486 4.5e-47 193.4 186 60.2
SMO356G0244 Selaginella moellendorffii HOM05D001354 ORTHO05D007486 5.9e-47 193.0 182 59.9
CsaV3_6G040720 Cucumis sativus L. HOM05D001354 ORTHO05D007486 1.0e-46 192.2 185 58.4
AUR62006196 Chenopodium quinoa HOM05D001354 ORTHO05D007486 2.2e-46 191.0 182 59.3
Cc06_g05970 Coffea canephora HOM05D001354 ORTHO05D007486 2.2e-46 191.0 186 57.5
Manes.08G026300 Manihot esculenta HOM05D001354 ORTHO05D007486 2.2e-46 191.0 186 56.5
Hund19917 Selenicereus undatus HOM05D001354 ORTHO05D007486 2.2e-46 191.0 188 58.0
GSVIVG01033862001 Vitis vinifera HOM05D001354 ORTHO05D007486 2.2e-46 191.0 187 59.9
Cpa.g.sc5.5 Carica papaya HOM05D001354 ORTHO05D007486 2.9e-46 190.7 186 57.5
Ciclev10011285m.g Citrus clementina HOM05D001354 ORTHO05D007486 2.9e-46 190.7 182 58.8
Gohir.D04G098700 Gossypium hirsutum HOM05D001354 ORTHO05D007486 2.9e-46 190.7 186 57.0
Duzib128G1904 Durio zibethinus HOM05D001354 ORTHO05D007486 3.8e-46 190.3 186 57.5
Gohir.A04G061900 Gossypium hirsutum HOM05D001354 ORTHO05D007486 3.8e-46 190.3 186 57.0
Gorai.009G401100 Gossypium raimondii HOM05D001354 ORTHO05D007486 3.8e-46 190.3 186 57.0
TWI74G0096 Tripterygium wilfordii HOM05D001354 ORTHO05D007486 3.8e-46 190.3 186 59.1
TAR369G1154 Trochodendron aralioides HOM05D001354 ORTHO05D007486 3.8e-46 190.3 186 58.1
ECA247G1665 Erigeron canadensis HOM05D001354 ORTHO05D007486 5.0e-46 189.9 185 57.3
HanXRQChr08g0229841 Helianthus annuus HOM05D001354 ORTHO05D007486 5.0e-46 189.9 185 57.3
TAR623G0908 Trochodendron aralioides HOM05D001354 ORTHO05D007486 6.5e-46 189.5 187 57.2
arahy.Tifrunner.gnm1.ann1.6W7F9R Arachis hypogaea HOM05D001354 ORTHO05D007486 8.5e-46 189.1 181 59.1
AUR62037024 Chenopodium quinoa HOM05D001354 ORTHO05D007486 8.5e-46 189.1 182 58.8
Potri.016G078600 Populus trichocarpa HOM05D001354 ORTHO05D007486 8.5e-46 189.1 187 58.8
Dinv31698 Davidia involucrata HOM05D001354 ORTHO05D007486 1.1e-45 188.7 186 57.5
CiPaw.10G010900 Carya illinoinensis HOM05D001354 ORTHO05D007486 1.5e-45 188.3 186 57.5
Nitab4.5_0000692g0200 Nicotiana tabacum HOM05D001354 ORTHO05D007486 1.5e-45 188.3 186 58.6
Oeu017685.1 Olea europaea HOM05D001354 ORTHO05D007486 1.5e-45 188.3 185 56.8
QL07p038630 Quercus lobata HOM05D001354 ORTHO05D007486 2.5e-45 187.6 185 58.4
Prupe.7G104500 Prunus persica HOM05D001354 ORTHO05D007486 3.2e-45 187.2 185 56.2
Atru.chr8.1482 Acer truncatum HOM05D001354 ORTHO05D007486 4.2e-45 186.8 179 58.7
Aqoxy4G02758 Aquilegia oxysepala HOM05D001354 ORTHO05D007486 4.2e-45 186.8 187 59.4
MD12G1027100 Malus domestica HOM05D001354 ORTHO05D007486 4.2e-45 186.8 185 57.8
Solyc09g009940.3 Solanum lycopersicum HOM05D001354 ORTHO05D007486 4.2e-45 186.8 186 57.5
Sopen09g004690 Solanum pennellii HOM05D001354 ORTHO05D007486 4.2e-45 186.8 186 57.5
SGA_v2.0_scaffold35G14056 Striga asiatica HOM05D001354 ORTHO05D007486 4.2e-45 186.8 185 56.2
MSTRG.26635 Avicennia marina HOM05D001354 ORTHO05D007486 5.5e-45 186.4 187 56.7
EL10Ac7g16902 Beta vulgaris HOM05D001354 ORTHO05D007486 5.5e-45 186.4 182 57.7
C09p72990 Brassica napus HOM05D001354 ORTHO05D007486 5.5e-45 186.4 184 57.6
CDE04G0653 Ceratophyllum demersum HOM05D001354 ORTHO05D007486 5.5e-45 186.4 184 57.1
ClCG04G010090 Citrullus lanatus HOM05D001354 ORTHO05D007486 5.5e-45 186.4 183 56.8
Thhalv10013128m.g Eutrema salsugineum HOM05D001354 ORTHO05D007486 5.5e-45 186.4 187 57.8
Cfa009072 Carpinus fangiana HOM05D001354 ORTHO05D007486 7.2e-45 186.0 186 56.5
THA.LOC104826945 Tarenaya hassleriana HOM05D001354 ORTHO05D007486 7.2e-45 186.0 186 57.5
ATR0776G078 Amborella trichopoda HOM05D001354 ORTHO05D007486 9.4e-45 185.7 187 57.8
Ca_09014_v3 Cicer arietinum L. HOM05D001354 ORTHO05D007486 9.4e-45 185.7 185 57.3
DCAR_020740 Daucus carota HOM05D001354 ORTHO05D007486 9.4e-45 185.7 178 59.6
MD14G1027200 Malus domestica HOM05D001354 ORTHO05D007486 9.4e-45 185.7 185 57.3
BcaC06g32097 Brassica carinata HOM05D001354 ORTHO05D007486 1.2e-44 185.3 182 57.1
A10p32190 Brassica napus HOM05D001354 ORTHO05D007486 1.2e-44 185.3 184 57.1
BraA10t45262Z Brassica rapa HOM05D001354 ORTHO05D007486 1.2e-44 185.3 184 57.1
Sed0006925 Sechium edule HOM05D001354 ORTHO05D007486 1.6e-44 184.9 178 57.9
CSS0014332 Camellia sinensis var. sinensis HOM05D001354 ORTHO05D007486 2.1e-44 184.5 161 62.1
CDE07G0063 Ceratophyllum demersum HOM05D001354 ORTHO05D007486 2.1e-44 184.5 184 56.5
Sp6g38800 Schrenkiella parvula HOM05D001354 ORTHO05D007486 2.1e-44 184.5 187 57.2
Sed0016317 Sechium edule HOM05D001354 ORTHO05D007486 2.1e-44 184.5 185 55.1
PGSC0003DMG400008871 Solanum tuberosum HOM05D001354 ORTHO05D007486 2.1e-44 184.5 186 57.0
Lj1g0015071 Lotus japonicus HOM05D001354 ORTHO05D007486 2.7e-44 184.1 179 57.0
Medtr7g104890 Medicago truncatula HOM05D001354 ORTHO05D007486 2.7e-44 184.1 181 56.4
Ah.15g090690 Amaranthus hybridus HOM05D001354 ORTHO05D007486 4.7e-44 183.3 184 58.2
Carub.0006s0289 Capsella rubella HOM05D001354 ORTHO05D007486 4.7e-44 183.3 184 57.6
Potri.006G211500 Populus trichocarpa HOM05D001354 ORTHO05D007486 6.1e-44 183.0 243 48.6
CiPaw.09G015300 Carya illinoinensis HOM05D001354 ORTHO05D007486 8.0e-44 182.6 186 55.4
PGR004G0555 Punica granatum HOM05D001354 ORTHO05D007486 8.0e-44 182.6 242 46.7
AL6G13540 Arabidopsis lyrata HOM05D001354 ORTHO05D007486 1.0e-43 182.2 184 57.1
AT5G03940 Arabidopsis thaliana HOM05D001354 ORTHO05D007486 1.0e-43 182.2 184 57.1
Migut.L01789 Erythranthe guttata HOM05D001354 ORTHO05D007486 1.0e-43 182.2 181 55.8
CARHR209330 Cardamine hirsuta HOM05D001354 ORTHO05D007486 1.8e-43 181.4 186 55.9
Duzib093G0955 Durio zibethinus HOM05D001354 ORTHO05D007486 2.3e-43 181.0 186 55.9
PSO384G2091 Papaver somniferum HOM05D001354 ORTHO05D007486 2.3e-43 181.0 186 56.5
Sabra06G0163100 Salix brachista HOM05D001354 ORTHO05D007486 2.3e-43 181.0 240 48.3
Glyma.19G194985 Glycine max HOM05D001354 ORTHO05D007486 3.0e-43 180.6 186 55.4
Sc02g0003670 Simmondsia chinensis HOM05D001354 ORTHO05D007486 3.0e-43 180.6 159 61.6
CANSAT64G2635 Cannabis sativa HOM05D001354 ORTHO05D007486 5.2e-43 179.9 186 54.8
PSO339G0273 Papaver somniferum HOM05D001354 ORTHO05D007486 5.2e-43 179.9 186 57.5
Glyma.03G196900 Glycine max HOM05D001354 ORTHO05D007486 6.8e-43 179.5 186 55.4
Phvul.001G191200 Phaseolus vulgaris HOM05D001354 ORTHO05D007486 8.8e-43 179.1 186 55.4
Lj1g0026731 Lotus japonicus HOM05D001354 ORTHO05D007486 1.2e-42 178.7 209 50.7
Peaxi162Scf00404g00116 Petunia axillaris HOM05D001354 ORTHO05D007486 1.2e-42 178.7 186 55.4
Lsat_1_v5_gn_9_20661 Lactuca sativa HOM05D001354 ORTHO05D007486 1.5e-42 178.3 185 55.7
VMungo1383G1548 Vigna mungo HOM05D001354 ORTHO05D007486 2.0e-42 177.9 186 55.4
Eucgr.A02656 Eucalyptus grandis HOM05D001354 ORTHO05D007486 2.6e-42 177.6 244 47.1
Lj2A139G33 Lonicera japonica HOM05D001354 ORTHO05D007486 2.6e-42 177.6 186 53.8
MBI11_g26443_MAGBIO Magnolia biondii HOM05D001354 ORTHO05D007486 3.4e-42 177.2 184 56.5
RcHm_v2.0_Chr3g0474211 Rosa chinensis HOM05D001354 ORTHO05D007486 3.4e-42 177.2 186 55.9
Lalb_Chr20g0111661 Lupinus albus HOM05D001354 ORTHO05D007486 4.4e-42 176.8 182 54.4
MSTRG.10373 Avicennia marina HOM05D001354 ORTHO05D007486 5.7e-42 176.4 241 45.6
FAN02G4160 Fragaria x ananassa HOM05D001354 ORTHO05D007486 5.7e-42 176.4 186 55.9
FvH4_6g19110 Fragaria vesca HOM05D001354 ORTHO05D007486 7.5e-42 176.0 186 55.9
arahy.Tifrunner.gnm1.ann1.KBFV5H Arachis hypogaea HOM05D001354 ORTHO05D007486 9.8e-42 175.6 141 64.5
BolC9t60034H Brassica oleracea HOM05D001354 ORTHO05D007486 1.7e-41 174.9 195 53.3
FAN05G2413 Fragaria x ananassa HOM05D001354 ORTHO05D007486 1.7e-41 174.9 186 55.4
Lalb_Chr25g0288291 Lupinus albus HOM05D001354 ORTHO05D007486 1.7e-41 174.9 157 58.6
HPP92_009892 Vanilla planifolia HOM05D001354 ORTHO05D007486 1.7e-41 174.9 186 54.8
Haze_12107 Corylus avellana HOM05D001354 ORTHO05D007486 3.7e-41 173.7 152 60.5
Sabra16G0082900 Salix brachista HOM05D001354 ORTHO05D007486 3.7e-41 173.7 152 60.5
COL.COLO4_29709 Corchorus olitorius HOM05D001354 ORTHO05D007486 6.3e-41 172.9 161 58.4
Rhsim04G0132400 Rhododendron simsii HOM05D001354 ORTHO05D007486 1.1e-40 172.2 155 60.0
BcaB05g21794 Brassica carinata HOM05D001354 ORTHO05D007486 3.1e-40 170.6 186 52.7
C02p01620 Brassica napus HOM05D001354 ORTHO05D007486 3.1e-40 170.6 186 52.7
BolC2t06127H Brassica oleracea HOM05D001354 ORTHO05D007486 3.1e-40 170.6 186 52.7
TPR.G23362 Trifolium pratense HOM05D001354 ORTHO05D007486 3.1e-40 170.6 157 58.6
BcaC03g12975 Brassica carinata HOM05D001354 ORTHO05D007486 4.1e-40 170.2 186 52.7
BraA02t04793Z Brassica rapa HOM05D001354 ORTHO05D007486 4.1e-40 170.2 186 52.7
FAN14G3045 Fragaria x ananassa HOM05D001354 ORTHO05D007486 7.0e-40 169.5 195 53.3
SEGI_32484 Sequoiadendron giganteum HOM05D001354 ORTHO05D007486 2.7e-39 167.5 150 60.0
Lj3A996T80 Lonicera japonica HOM05D001354 ORTHO05D007486 1.0e-38 165.6 149 61.1
Zm00001eb406840 Zea mays HOM05D001354 ORTHO05D007486 1.0e-38 165.6 163 55.2
Actinidia07924 Actinidia chinensis HOM05D001354 ORTHO05D007486 3.8e-38 163.7 157 57.3
Sc02g0000320 Simmondsia chinensis HOM05D001354 ORTHO05D007486 1.1e-37 162.2 336 37.8
CBR_g3973 Chara braunii HOM05D008561 ORTHO05D013064 9.5e-37 159.1 276 44.6
Os11g0153600 Oryza sativa ssp. japonica HOM05D001354 ORTHO05D007486 2.1e-36 157.9 164 55.5
Zm00001eb197120 Zea mays HOM05D001354 ORTHO05D007486 2.3e-35 154.5 162 54.3
Os11g0153700 Oryza sativa ssp. japonica HOM05D001354 ORTHO05D007486 4.0e-35 153.7 161 53.4
Aa31LG1G21360 Aethionema arabicum HOM05D001354 ORTHO05D007486 2.0e-34 151.4 126 63.5
CBR_g20009 Chara braunii HOM05D008561 ORTHO05D013064 7.8e-31 139.4 369 35.8
CBR_g58076 Chara braunii HOM05D008561 ORTHO05D013064 7.8e-31 139.4 376 36.7
CBR_g26021 Chara braunii HOM05D008561 ORTHO05D013064 1.0e-30 139.0 334 33.5
CBR_g40776 Chara braunii HOM05D000019 ORTHO05D000002 4.7e-28 130.2 318 34.3
CBR_g48306 Chara braunii HOM05D008561 ORTHO05D013064 6.1e-28 129.8 283 35.0
unitig_578.g16364 Utricularia gibba HOM05D001354 ORTHO05D007486 6.1e-28 129.8 109 61.5
CBR_g48035 Chara braunii HOM05D008561 ORTHO05D013064 3.0e-27 127.5 323 32.8
CBR_g38363 Chara braunii HOM05D008561 ORTHO05D013064 3.2e-24 117.5 369 33.9
CBR_g38245 Chara braunii HOM05D008561 ORTHO05D137066 4.6e-23 113.6 332 32.5
CBR_g3635 Chara braunii HOM05D008561 ORTHO05D013064 1.0e-22 112.5 227 38.3
CBR_g12356 Chara braunii HOM05D008561 ORTHO05D136432 1.3e-22 112.1 350 34.9
CBR_g49137 Chara braunii HOM05D008561 ORTHO05D013064 2.5e-21 107.8 289 32.9
CBR_g30546 Chara braunii HOM05D008561 ORTHO05D135260 9.5e-21 105.9 114 65.8
CBR_g49273 Chara braunii HOM05D008561 ORTHO05D013064 1.6e-20 105.1 299 33.4
Cre11.g479750 Chlamydomonas reinhardtii HOM05D001354 ORTHO05D007486 4.7e-20 103.6 175 36.6
CBR_g45946 Chara braunii HOM05D008561 ORTHO05D137058 2.3e-19 101.3 197 44.2
CBR_g29773 Chara braunii HOM05D008561 ORTHO05D137162 2.6e-18 97.8 306 31.4
CBR_g8342 Chara braunii HOM05D008561 ORTHO05D132783 7.5e-18 96.3 237 34.6
vmacro08868 Vaccinium macrocarpon HOM05D001354 ORTHO05D007486 9.8e-18 95.9 93 58.1
FAN14G3297 Fragaria x ananassa HOM05D001354 ORTHO05D027597 1.7e-17 95.1 117 50.4
Psat3g032320 Pisum sativum HOM05D001354 ORTHO05D007486 4.9e-17 93.6 74 64.9
CBR_g12075 Chara braunii HOM05D008561 ORTHO05D013064 6.4e-17 93.2 235 31.9
CBR_g49827 Chara braunii HOM05D000019 ORTHO05D000002 8.3e-17 92.8 109 57.8
CBR_g30088 Chara braunii HOM05D008561 ORTHO05D136641 3.2e-16 90.9 115 63.5
CBR_g41072 Chara braunii HOM05D008561 ORTHO05D013064 1.6e-15 88.6 225 38.7
CBR_g51965 Chara braunii HOM05D008561 ORTHO05D013064 1.6e-15 88.6 211 34.1
BcaB05g25316 Brassica carinata HOM05D001354 ORTHO05D027597 2.7e-15 87.8 77 55.8
CBR_g55411 Chara braunii HOM05D008561 ORTHO05D013064 7.8e-15 86.3 210 34.8
CBR_g49562 Chara braunii HOM05D008561 ORTHO05D135266 1.7e-14 85.1 119 50.4
MCO01G192 Micromonas commoda HOM05D001354 ORTHO05D007486 1.1e-13 82.4 131 38.2
CBR_g52134 Chara braunii HOM05D008561 ORTHO05D013064 1.5e-13 82.0 209 33.5
CBR_g41520 Chara braunii HOM05D000019 ORTHO05D000002 9.5e-13 79.3 230 34.8
SEGI_33404 Sequoiadendron giganteum HOM05D001354 ORTHO05D027597 1.1e-11 75.9 71 59.2
CBR_g89 Chara braunii HOM05D008561 ORTHO05D013064 2.0e-10 71.6 192 29.2
CBR_g31910 Chara braunii HOM05D008264 ORTHO05D135517 2.2e-09 68.2 348 26.7
CBR_g51642 Chara braunii HOM05D008561 ORTHO05D131702 1.9e-08 65.1 106 41.5
CBR_g828 Chara braunii HOM05D008264 ORTHO05D003137 3.5e-07 60.8 370 25.7
CBR_g32091 Chara braunii HOM05D008561 ORTHO05D134880 6.0e-07 60.1 196 35.2
BcaB05g21818 Brassica carinata HOM05D001354 ORTHO05D096150 2.3e-06 58.2 185 28.6
CBR_g31902 Chara braunii HOM05D009703 ORTHO05D011988 3.0e-06 57.8 386 28.8
CBR_g63079 Chara braunii HOM05D004472 ORTHO05D007169 3.0e-06 57.8 375 26.1
CBR_g37455 Chara braunii HOM05D000019 ORTHO05D000002 5.1e-06 57.0 403 22.6
CBR_g20313 Chara braunii HOM05D009703 ORTHO05D011988 6.6e-06 56.6 346 24.6
CBR_g4726 Chara braunii HOM05D008264 ORTHO05D000048 6.6e-06 56.6 335 23.9
Migut.H01871 Erythranthe guttata HOM05D001354 ORTHO05D002582 6.6e-06 56.6 145 31.7


User provided reference genes

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