Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g39720 Chara braunii HOM05D001849 ORTHO05D004689 0.0e+00 2506.9 1418 100.0
AagrBONN_evm.TU.Sc2ySwM_362.2383 Anthoceros agrestis HOM05D001849 ORTHO05D004689 1.2e-166 592.0 1082 36.8
Pp3c8_15880 Physcomitrium patens HOM05D001849 ORTHO05D004689 1.5e-166 591.7 1091 37.6
Mapoly0024s0112 Marchantia polymorpha HOM05D001849 ORTHO05D004689 3.8e-165 587.0 1087 36.4
Gohir.A09G079900 Gossypium hirsutum HOM05D001849 ORTHO05D004689 5.3e-151 540.0 1074 35.1
MBI13_g01700_MAGBIO Magnolia biondii HOM05D001849 ORTHO05D004689 5.3e-151 540.0 1083 35.1
vmacro15054 Vaccinium macrocarpon HOM05D001849 ORTHO05D004689 1.7e-149 535.0 1079 35.0
COL.COLO4_30797 Corchorus olitorius HOM05D001849 ORTHO05D004689 1.1e-148 532.3 1082 34.9
Duzib235G0671 Durio zibethinus HOM05D001849 ORTHO05D004689 7.2e-148 529.6 1073 34.9
PSO724G1390 Papaver somniferum HOM05D001849 ORTHO05D004689 1.2e-147 528.9 1100 34.5
Thecc.06G124800 Theobroma cacao HOM05D001849 ORTHO05D004689 2.1e-147 528.1 1069 34.7
TWI59G1440 Tripterygium wilfordii HOM05D001849 ORTHO05D004689 2.1e-147 528.1 1079 35.3
Medtr8g022010 Medicago truncatula HOM05D001849 ORTHO05D004689 2.7e-147 527.7 1079 34.7
Thhalv10019957m.g Eutrema salsugineum HOM05D001849 ORTHO05D004689 1.4e-146 525.4 1067 34.9
PSO386G0179 Papaver somniferum HOM05D001849 ORTHO05D004689 2.3e-146 524.6 1104 34.7
Manes.11G016400 Manihot esculenta HOM05D001849 ORTHO05D004689 5.2e-146 523.5 1075 34.5
THA.LOC104822664 Tarenaya hassleriana HOM05D001849 ORTHO05D004689 5.2e-146 523.5 1069 34.1
Duzib192G0006 Durio zibethinus HOM05D001849 ORTHO05D004689 6.7e-146 523.1 1074 34.9
Sopen12g023890 Solanum pennellii HOM05D001849 ORTHO05D004689 6.7e-146 523.1 1086 34.4
AL3G26350 Arabidopsis lyrata HOM05D001849 ORTHO05D004689 8.8e-146 522.7 1069 34.4
Carub.0003s1373 Capsella rubella HOM05D001849 ORTHO05D004689 3.3e-145 520.8 1069 34.2
A05p35330 Brassica napus HOM05D001849 ORTHO05D004689 4.4e-145 520.4 1068 34.7
Potri.001G165900 Populus trichocarpa HOM05D001849 ORTHO05D004689 7.4e-145 519.6 1076 34.8
Solyc12g049410.3 Solanum lycopersicum HOM05D001849 ORTHO05D004689 7.4e-145 519.6 1088 34.4
Sp3g12380 Schrenkiella parvula HOM05D001849 ORTHO05D004689 1.3e-144 518.8 1067 34.9
AT3G14120 Arabidopsis thaliana HOM05D001849 ORTHO05D004689 1.7e-144 518.5 1069 34.2
Gohir.D09G079550 Gossypium hirsutum HOM05D001849 ORTHO05D004689 4.8e-144 516.9 1099 34.1
EL10Ac7g16444 Beta vulgaris HOM05D001849 ORTHO05D004689 4.1e-143 513.8 1089 35.2
Gorai.006G094800 Gossypium raimondii HOM05D001849 ORTHO05D004689 4.1e-143 513.8 1094 33.8
PGR119G1999 Punica granatum HOM05D001849 ORTHO05D004689 4.1e-143 513.8 1085 34.2
FvH4_6g35170 Fragaria vesca HOM05D001849 ORTHO05D004689 5.3e-143 513.5 1072 34.4
BolC1t05000H Brassica oleracea HOM05D001849 ORTHO05D004689 7.0e-143 513.1 1080 33.9
C01p50480 Brassica napus HOM05D001849 ORTHO05D004689 9.1e-143 512.7 1076 33.9
FAN05G2930 Fragaria x ananassa HOM05D001849 ORTHO05D004689 1.2e-142 512.3 1070 34.6
Aa31LG8G1350 Aethionema arabicum HOM05D001849 ORTHO05D004689 1.6e-142 511.9 1069 33.8
Prupe.3G037400 Prunus persica HOM05D001849 ORTHO05D004689 1.6e-142 511.9 1082 34.0
ATR0681G401 Amborella trichopoda HOM05D001849 ORTHO05D004689 2.0e-142 511.5 1072 35.2
Aqoxy7G04006 Aquilegia oxysepala HOM05D001849 ORTHO05D004689 2.6e-142 511.1 1089 33.9
BcaC05g29121 Brassica carinata HOM05D001849 ORTHO05D004689 3.5e-142 510.8 1068 34.3
TPR.G29992 Trifolium pratense HOM05D001849 ORTHO05D004689 5.9e-142 510.0 1082 34.0
C05p53520 Brassica napus HOM05D001849 ORTHO05D004689 7.7e-142 509.6 1068 34.3
CiPaw.01G216000 Carya illinoinensis HOM05D001849 ORTHO05D004689 2.2e-141 508.1 1075 34.5
RcHm_v2.0_Chr2g0146431 Rosa chinensis HOM05D001849 ORTHO05D004689 2.2e-141 508.1 1073 33.9
BolC5t34029H Brassica oleracea HOM05D001849 ORTHO05D004689 3.8e-141 507.3 1068 34.3
ECA232G2821 Erigeron canadensis HOM05D001849 ORTHO05D004689 5.0e-141 506.9 1092 33.7
MD09G1178100 Malus domestica HOM05D001849 ORTHO05D004689 6.5e-141 506.5 1079 34.6
Zm00001eb165950 Zea mays HOM05D001849 ORTHO05D004689 1.9e-140 505.0 1080 33.9
Psat4g166880 Pisum sativum HOM05D001849 ORTHO05D004689 2.5e-140 504.6 1118 33.5
Ciclev10027090m.g Citrus clementina HOM05D001849 ORTHO05D004689 5.5e-140 503.4 1080 34.3
SGA_v2.0_scaffold4G02078 Striga asiatica HOM05D001849 ORTHO05D004689 3.6e-139 500.7 1073 33.9
QL05p003662 Quercus lobata HOM05D001849 ORTHO05D004689 6.1e-139 500.0 1087 33.8
VMungo0331G1611 Vigna mungo HOM05D001849 ORTHO05D004689 1.8e-138 498.4 1098 33.4
BraA05t22343Z Brassica rapa HOM05D001849 ORTHO05D004689 2.3e-138 498.0 1106 33.5
Glyma.07G042000 Glycine max HOM05D001849 ORTHO05D004689 3.0e-138 497.7 1093 33.4
SMO304G0023 Selaginella moellendorffii HOM05D001849 ORTHO05D004689 4.0e-138 497.3 1067 33.7
DCAR_026423 Daucus carota HOM05D001849 ORTHO05D004689 5.2e-138 496.9 1072 33.6
arahy.Tifrunner.gnm1.ann1.RMM65D Arachis hypogaea HOM05D001849 ORTHO05D004689 1.5e-137 495.4 1040 34.3
Sabra01G0127400 Salix brachista HOM05D001849 ORTHO05D004689 2.6e-137 494.6 1081 34.2
CANSAT56G0878 Cannabis sativa HOM05D001849 ORTHO05D004689 4.4e-137 493.8 1074 34.0
arahy.Tifrunner.gnm1.ann1.1RN2YG Arachis hypogaea HOM05D001849 ORTHO05D004689 5.7e-137 493.4 1040 34.3
Lj3g0004011 Lotus japonicus HOM05D001849 ORTHO05D004689 9.7e-137 492.7 1131 32.8
FAN14G1459 Fragaria x ananassa HOM05D001849 ORTHO05D004689 1.7e-136 491.9 1053 34.2
FAN02G0489 Fragaria x ananassa HOM05D001849 ORTHO05D004689 2.2e-136 491.5 1126 32.9
AUR62001443 Chenopodium quinoa HOM05D001849 ORTHO05D004689 3.7e-136 490.7 1074 34.8
CSS0036951 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 4.8e-136 490.3 1077 33.8
Cfa003503 Carpinus fangiana HOM05D001849 ORTHO05D004689 4.8e-136 490.3 1085 33.6
Phvul.010G127100 Phaseolus vulgaris HOM05D001849 ORTHO05D004689 1.8e-135 488.4 1085 33.4
HanXRQChr09g0277131 Helianthus annuus HOM05D001849 ORTHO05D004689 7.0e-135 486.5 1091 32.9
Lsat_1_v5_gn_4_91381 Lactuca sativa HOM05D001849 ORTHO05D004689 1.6e-134 485.3 1075 32.9
FAN09G4066 Fragaria x ananassa HOM05D001849 ORTHO05D004689 2.0e-134 485.0 1072 33.5
MD17G1148600 Malus domestica HOM05D001849 ORTHO05D004689 5.9e-134 483.4 1085 34.0
AUR62009922 Chenopodium quinoa HOM05D001849 ORTHO05D004689 1.7e-133 481.9 1128 33.1
CsaV3_7G034250 Cucumis sativus L. HOM05D001849 ORTHO05D004689 1.1e-132 479.2 1063 33.4
Sed0016273 Sechium edule HOM05D001849 ORTHO05D004689 1.9e-132 478.4 1071 33.1
Peaxi162Scf00177g00518 Petunia axillaris HOM05D001849 ORTHO05D004689 2.5e-132 478.0 1104 32.3
GSVIVG01016717001 Vitis vinifera HOM05D001849 ORTHO05D004689 4.2e-132 477.2 992 34.7
Rhsim08G0241300 Rhododendron simsii HOM05D001849 ORTHO05D004689 1.2e-131 475.7 1076 33.9
Hund18672 Selenicereus undatus HOM05D001849 ORTHO05D004689 6.1e-131 473.4 1023 34.9
ClCG09G001140 Citrullus lanatus HOM05D001849 ORTHO05D004689 1.4e-130 472.2 1130 32.3
Cc04_g01040 Coffea canephora HOM05D001849 ORTHO05D004689 3.0e-130 471.1 999 34.7
Atru.chr2.1505 Acer truncatum HOM05D001849 ORTHO05D004689 1.1e-127 462.6 1002 34.1
TAR626G0833 Trochodendron aralioides HOM05D001849 ORTHO05D004689 1.8e-127 461.8 972 34.6
HPP92_022009 Vanilla planifolia HOM05D001849 ORTHO05D004689 1.2e-126 459.1 994 33.7
Eucgr.K02038 Eucalyptus grandis HOM05D001849 ORTHO05D004689 2.9e-125 454.5 1010 33.8
CSS0020628 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 1.9e-124 451.8 1085 32.7
CAN.G1243.9 Capsicum annuum HOM05D001849 ORTHO05D004689 3.0e-122 444.5 990 33.7
Lj9C535G6 Lonicera japonica HOM05D001849 ORTHO05D004689 6.8e-122 443.4 1061 32.5
SalBow7G1889 Salvia bowleyana HOM05D001849 ORTHO05D004689 8.9e-122 443.0 1194 30.5
Lalb_Chr10g0101321 Lupinus albus HOM05D001849 ORTHO05D004689 1.2e-118 432.6 992 32.5
CDE06G0404 Ceratophyllum demersum HOM05D001849 ORTHO05D004689 1.1e-116 426.0 1064 32.4
Migut.D00924 Erythranthe guttata HOM05D001849 ORTHO05D004689 9.5e-116 422.9 925 33.5
A01p39550 Brassica napus HOM05D001849 ORTHO05D004689 3.6e-115 421.0 1036 30.7
MELO3C024334.2 Cucumis melo HOM05D001849 ORTHO05D004689 4.7e-115 420.6 1159 30.3
CDE07G1134 Ceratophyllum demersum HOM05D001849 ORTHO05D004689 8.0e-115 419.9 988 33.1
Dinv20408 Davidia involucrata HOM05D001849 ORTHO05D004689 1.4e-114 419.1 948 33.3
Nitab4.5_0000189g0010 Nicotiana tabacum HOM05D001849 ORTHO05D004689 7.5e-113 413.3 941 33.4
Actinidia32206 Actinidia chinensis HOM05D001849 ORTHO05D004689 1.6e-110 405.6 1081 31.4
unitig_578.g16691 Utricularia gibba HOM05D001849 ORTHO05D004689 4.7e-107 394.0 1047 29.5
Haze_16076 Corylus avellana HOM05D001849 ORTHO05D004689 6.8e-106 390.2 1167 29.6
Oeu008524.4 Olea europaea HOM05D001849 ORTHO05D004689 4.3e-100 370.9 1195 29.3
CSS0050059 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 1.6e-99 369.0 982 30.9
CSS0003623 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 2.0e-97 362.1 1006 30.6
Hma1.2p1_0229F.1_g096770 Hydrangea macrophylla HOM05D001849 ORTHO05D004689 4.7e-91 340.9 828 33.2
Hma1.2p1_0229F.1_g096760 Hydrangea macrophylla HOM05D001849 ORTHO05D004689 2.5e-84 318.5 674 34.0
SHI25232 Sapria himalayana HOM05D001849 ORTHO05D004689 1.3e-75 289.7 825 29.7
Ca_23411_v3 Cicer arietinum L. HOM05D001849 ORTHO05D004689 1.1e-68 266.5 647 32.5
Nitab4.5_0004322g0010 Nicotiana tabacum HOM05D001849 ORTHO05D004689 3.1e-66 258.5 656 31.4
CARHR088980 Cardamine hirsuta HOM05D001849 ORTHO05D004689 4.0e-58 231.5 557 32.3
BraA01t03995Z Brassica rapa HOM05D001849 ORTHO05D004689 1.0e-53 216.9 595 30.6
FAN05G4033 Fragaria x ananassa HOM05D001849 ORTHO05D004689 1.5e-52 213.0 291 43.0
Os11g0643700 Oryza sativa ssp. japonica HOM05D001849 ORTHO05D004689 3.7e-51 208.4 536 30.6
SEGI_21815 Sequoiadendron giganteum HOM05D001849 ORTHO05D004689 6.3e-43 181.0 413 34.1
Ca_23412_v3 Cicer arietinum L. HOM05D001849 ORTHO05D004689 2.0e-41 176.0 455 31.9
Cpa.g.sc169.27 Carica papaya HOM05D001849 ORTHO05D004689 5.1e-37 161.4 334 35.9
MCO04G165 Micromonas commoda HOM05D001849 ORTHO05D004689 1.3e-35 156.8 697 25.4
Cre10.g425675 Chlamydomonas reinhardtii HOM05D001849 ORTHO05D004689 7.4e-28 131.0 366 27.9
Cpa.g.sc169.30 Carica papaya HOM05D001849 ORTHO05D004689 1.7e-24 119.8 131 50.4
HPP92_021920 Vanilla planifolia HOM05D001849 ORTHO05D004689 7.5e-20 104.4 149 43.0
SEGI_09459 Sequoiadendron giganteum HOM05D001849 ORTHO05D004689 3.7e-19 102.1 137 39.4
Glyma.16G010300 Glycine max HOM05D001849 ORTHO05D004689 4.8e-19 101.7 157 39.5
QL11p014752 Quercus lobata HOM05D001849 ORTHO05D004689 3.1e-18 99.0 136 43.4
Cpa.g.sc169.31 Carica papaya HOM05D001849 ORTHO05D004689 2.0e-17 96.3 81 56.8
PRCOL_00005073 Prasinoderma coloniale HOM05D001849 ORTHO05D004689 2.7e-17 95.9 577 24.4
SEGI_30532 Sequoiadendron giganteum HOM05D001849 ORTHO05D004689 3.8e-16 92.0 101 52.5
Cpa.g.sc169.28 Carica papaya HOM05D001849 ORTHO05D004689 7.2e-15 87.8 180 33.9
CSS0033574 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 2.0e-12 79.7 174 35.1
MBI18_g40032_MAGBIO Magnolia biondii HOM05D000132 ORTHO05D000058 2.6e-12 79.3 74 47.3
CAN.G1243.8 Capsicum annuum HOM05D001849 ORTHO05D004689 3.1e-10 72.4 84 41.7
CSS0020573 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 5.0e-08 65.1 202 26.7
Cc04_g01050 Coffea canephora HOM05D001849 ORTHO05D004689 8.6e-08 64.3 72 40.3
CSS0047517 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 2.5e-07 62.8 184 29.3
Lalb_Chr10g0101331 Lupinus albus HOM05D001849 ORTHO05D004689 4.2e-07 62.0 85 40.0
GSVIVG01016718001 Vitis vinifera HOM05D001849 ORTHO05D004689 7.2e-07 61.2 72 41.7
MBI03_g16538_MAGBIO Magnolia biondii HOM05D001849 ORTHO05D004689 1.6e-06 60.1 76 42.1


User provided reference genes

Program Settings