Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g3761 Chara braunii HOM05D002121 ORTHO05D008891 0.0e+00 1283.9 742 100.0
Pp3c15_7530 Physcomitrium patens HOM05D002121 ORTHO05D008891 9.7e-15 86.7 191 33.0
SMO367G0241 Selaginella moellendorffii HOM05D002121 ORTHO05D008891 3.7e-14 84.7 193 30.1
AagrBONN_evm.TU.Sc2ySwM_228.2791 Anthoceros agrestis HOM05D002121 ORTHO05D008891 3.1e-13 81.6 178 34.3
Mapoly0066s0098 Marchantia polymorpha HOM05D002121 ORTHO05D008891 6.9e-13 80.5 194 27.8
Manes.02G166400 Manihot esculenta HOM05D002121 ORTHO05D008891 2.0e-12 79.0 192 29.2
VMungo1309G2347 Vigna mungo HOM05D002121 ORTHO05D008891 3.4e-12 78.2 191 32.5
SEGI_00220 Sequoiadendron giganteum HOM05D002121 ORTHO05D008891 4.5e-12 77.8 232 28.0
SEGI_39313 Sequoiadendron giganteum HOM05D002121 ORTHO05D008891 4.5e-12 77.8 232 28.0
TWI32G0996 Tripterygium wilfordii HOM05D002121 ORTHO05D008891 5.9e-12 77.4 192 29.7
TAR376G0507 Trochodendron aralioides HOM05D002121 ORTHO05D008891 5.9e-12 77.4 206 30.1
Hma1.2p1_0612F.1_g188790 Hydrangea macrophylla HOM05D002121 ORTHO05D008891 1.0e-11 76.6 192 30.2
MBI06_g44498_MAGBIO Magnolia biondii HOM05D002121 ORTHO05D008891 1.3e-11 76.3 198 28.8
Phvul.009G127600 Phaseolus vulgaris HOM05D002121 ORTHO05D008891 1.3e-11 76.3 192 30.7
Ciclev10001657m.g Citrus clementina HOM05D002121 ORTHO05D008891 1.7e-11 75.9 203 29.6
DCAR_002302 Daucus carota HOM05D002121 ORTHO05D008891 2.2e-11 75.5 192 29.7
AUR62002267 Chenopodium quinoa HOM05D002121 ORTHO05D008891 3.8e-11 74.7 194 31.4
DCAR_014379 Daucus carota HOM05D001700 ORTHO05D002131 3.8e-11 74.7 192 29.2
Cc10_g12290 Coffea canephora HOM05D002121 ORTHO05D008891 5.0e-11 74.3 191 29.3
Gorai.009G248000 Gossypium raimondii HOM05D002121 ORTHO05D008891 6.5e-11 73.9 191 30.4
Nn1g08892 Nelumbo nucifera HOM05D002121 ORTHO05D008891 6.5e-11 73.9 194 30.4
Potri.005G180700 Populus trichocarpa HOM05D002121 ORTHO05D008891 6.5e-11 73.9 192 29.2
HPP92_011391 Vanilla planifolia HOM05D002121 ORTHO05D008891 6.5e-11 73.9 195 30.8
FAN20G0023 Fragaria x ananassa HOM05D002121 ORTHO05D008891 8.5e-11 73.6 192 31.8
Gohir.D05G239200 Gossypium hirsutum HOM05D002121 ORTHO05D008891 8.5e-11 73.6 191 30.4
Prupe.1G492700 Prunus persica HOM05D002121 ORTHO05D008891 8.5e-11 73.6 192 29.7
FvH4_2g27490 Fragaria vesca HOM05D002121 ORTHO05D008891 1.4e-10 72.8 192 30.2
FAN15G1848 Fragaria x ananassa HOM05D002121 ORTHO05D008891 1.4e-10 72.8 192 30.2
FAN24G0685 Fragaria x ananassa HOM05D002121 ORTHO05D008891 1.4e-10 72.8 192 30.2
FAN27G1590 Fragaria x ananassa HOM05D002121 ORTHO05D008891 1.4e-10 72.8 192 29.7
Glyma.06G115500 Glycine max HOM05D002121 ORTHO05D008891 1.4e-10 72.8 192 30.2
CANSAT25G1674 Cannabis sativa HOM05D002121 ORTHO05D008891 1.9e-10 72.4 192 29.2
Dinv27282 Davidia involucrata HOM05D002121 ORTHO05D008891 1.9e-10 72.4 192 31.2
Psat5g086080 Pisum sativum HOM05D002121 ORTHO05D008891 1.9e-10 72.4 192 29.7
Duzib093G0305 Durio zibethinus HOM05D002121 ORTHO05D008891 2.5e-10 72.0 193 30.6
Medtr3g088510 Medicago truncatula HOM05D002121 ORTHO05D008891 3.2e-10 71.6 191 28.8
SGA_v2.0_scaffold52G18936 Striga asiatica HOM05D002121 ORTHO05D008891 4.2e-10 71.2 194 27.8
Thecc.08G129600 Theobroma cacao HOM05D002121 ORTHO05D008891 4.2e-10 71.2 193 30.6
Cre01.g063632 Chlamydomonas reinhardtii HOM05D002121 ORTHO05D008891 5.5e-10 70.9 68 51.5
Gohir.A05G237100 Gossypium hirsutum HOM05D002121 ORTHO05D008891 5.5e-10 70.9 191 30.4
Actinidia03419 Actinidia chinensis HOM05D002121 ORTHO05D008891 7.2e-10 70.5 192 30.7
MSTRG.25368 Avicennia marina HOM05D002121 ORTHO05D008891 7.2e-10 70.5 192 28.1
Cpa.g.sc64.123 Carica papaya HOM05D002121 ORTHO05D008891 7.2e-10 70.5 203 31.5
RcHm_v2.0_Chr6g0296321 Rosa chinensis HOM05D002121 ORTHO05D008891 7.2e-10 70.5 191 29.3
Solyc11g018510.2 Solanum lycopersicum HOM05D002121 ORTHO05D008891 7.2e-10 70.5 195 30.3
Aqoxy6G00263 Aquilegia oxysepala HOM05D002121 ORTHO05D008891 9.4e-10 70.1 194 27.3
Ca_16577_v3 Cicer arietinum L. HOM05D002121 ORTHO05D008891 9.4e-10 70.1 192 28.1
COL.COLO4_37918 Corchorus olitorius HOM05D002121 ORTHO05D008891 9.4e-10 70.1 191 29.8
Lalb_Chr23g0271121 Lupinus albus HOM05D002121 ORTHO05D008891 1.2e-09 69.7 207 27.5
MBI06_g04552_MAGBIO Magnolia biondii HOM05D002121 ORTHO05D008891 1.6e-09 69.3 194 28.4
PGSC0003DMG400009246 Solanum tuberosum HOM05D002121 ORTHO05D008891 1.6e-09 69.3 195 30.3
arahy.Tifrunner.gnm1.ann1.VL2KU3 Arachis hypogaea HOM05D002121 ORTHO05D008891 2.1e-09 68.9 191 29.3
A06p17800 Brassica napus HOM05D002121 ORTHO05D004000 2.7e-09 68.6 195 28.7
BraA06t24872Z Brassica rapa HOM05D002121 ORTHO05D008891 2.7e-09 68.6 195 28.7
CsaV3_6G034200 Cucumis sativus L. HOM05D002121 ORTHO05D008891 3.6e-09 68.2 192 29.2
Sed0022381 Sechium edule HOM05D002121 ORTHO05D008891 3.6e-09 68.2 192 28.1
Atru.chr13.1527 Acer truncatum HOM05D002121 ORTHO05D008891 4.6e-09 67.8 213 27.2
ATR0709G083 Amborella trichopoda HOM05D002121 ORTHO05D008891 4.6e-09 67.8 195 27.7
C05p20690 Brassica napus HOM05D002121 ORTHO05D004000 4.6e-09 67.8 197 29.4
BolC5t30768H Brassica oleracea HOM05D002121 ORTHO05D004000 4.6e-09 67.8 197 29.4
CARHR022070 Cardamine hirsuta HOM05D002121 ORTHO05D008891 4.6e-09 67.8 195 29.7
Eucgr.F03811 Eucalyptus grandis HOM05D002121 ORTHO05D008891 4.6e-09 67.8 192 29.7
Peaxi162Scf00310g00513 Petunia axillaris HOM05D002121 ORTHO05D008891 4.6e-09 67.8 193 30.1
arahy.Tifrunner.gnm1.ann1.IC0JL2 Arachis hypogaea HOM05D002121 ORTHO05D008891 6.1e-09 67.4 192 29.2
CAN.G1391.3 Capsicum annuum HOM05D002121 ORTHO05D008891 6.1e-09 67.4 196 29.6
Migut.C01114 Erythranthe guttata HOM05D002121 ORTHO05D008891 6.1e-09 67.4 191 28.8
Nitab4.5_0000111g0140 Nicotiana tabacum HOM05D002121 ORTHO05D008891 6.1e-09 67.4 192 29.2
CiPaw.15G034100 Carya illinoinensis HOM05D002121 ORTHO05D008891 7.9e-09 67.0 191 27.7
MELO3C010637.2 Cucumis melo HOM05D002121 ORTHO05D008891 7.9e-09 67.0 192 29.2
Sopen11g009470 Solanum pennellii HOM05D002121 ORTHO05D008891 7.9e-09 67.0 195 29.7
Aa31LG7G5680 Aethionema arabicum HOM05D002121 ORTHO05D008891 1.0e-08 66.6 195 30.3
AUR62015427 Chenopodium quinoa HOM05D002121 ORTHO05D008891 1.0e-08 66.6 59 54.2
QL09p033741 Quercus lobata HOM05D002121 ORTHO05D008891 1.0e-08 66.6 192 28.6
Hund17311 Selenicereus undatus HOM05D002121 ORTHO05D008891 1.0e-08 66.6 193 28.5
Haze_17516 Corylus avellana HOM05D002121 ORTHO05D008891 1.4e-08 66.2 192 31.2
Thhalv10008051m.g Eutrema salsugineum HOM05D002121 ORTHO05D008891 1.4e-08 66.2 195 29.2
Ah.05g171490 Amaranthus hybridus HOM05D002121 ORTHO05D008891 2.3e-08 65.5 192 30.2
HanXRQChr05g0148721 Helianthus annuus HOM05D002121 ORTHO05D008891 2.3e-08 65.5 192 29.2
vmacro00852 Vaccinium macrocarpon HOM05D002121 ORTHO05D008891 2.3e-08 65.5 68 50.0
EL10Ac1g00004 Beta vulgaris HOM05D002121 ORTHO05D008891 3.0e-08 65.1 191 26.7
CSS0024419 Camellia sinensis var. sinensis HOM05D002121 ORTHO05D008891 3.9e-08 64.7 46 60.9
Lj1g0016880 Lotus japonicus HOM05D002121 ORTHO05D008891 3.9e-08 64.7 192 28.1
PSO170G0582 Papaver somniferum HOM05D002121 ORTHO05D008891 3.9e-08 64.7 196 30.1
AT1G21710 Arabidopsis thaliana HOM05D002121 ORTHO05D008891 5.1e-08 64.3 195 29.2
BcaB03g12775 Brassica carinata HOM05D002121 ORTHO05D008891 5.1e-08 64.3 52 55.8
BcaB07g32168 Brassica carinata HOM05D002121 ORTHO05D008891 5.1e-08 64.3 52 55.8
CDE08G1413 Ceratophyllum demersum HOM05D002121 ORTHO05D008891 5.1e-08 64.3 204 24.5
MCO08G296 Micromonas commoda HOM05D002121 ORTHO05D008891 5.1e-08 64.3 191 29.8
Rhsim11G0070100 Rhododendron simsii HOM05D002121 ORTHO05D008891 5.1e-08 64.3 71 47.9
THA.LOC104800213 Tarenaya hassleriana HOM05D002121 ORTHO05D008891 5.1e-08 64.3 195 30.3
Carub.0001s2115 Capsella rubella HOM05D002121 ORTHO05D008891 8.8e-08 63.5 195 29.2
AL1G34880 Arabidopsis lyrata HOM05D002121 ORTHO05D008891 2.5e-07 62.0 191 28.8
ClCG08G005910 Citrullus lanatus HOM05D002121 ORTHO05D008891 2.5e-07 62.0 192 27.6
Lsat_1_v5_gn_6_97640 Lactuca sativa HOM05D002121 ORTHO05D008891 3.3e-07 61.6 188 29.3
BcaC05g26090 Brassica carinata HOM05D002121 ORTHO05D008891 4.3e-07 61.2 195 28.7
CAN.G1347.2 Capsicum annuum HOM05D002121 ORTHO05D008891 5.7e-07 60.8 50 60.0
Sp1g19270 Schrenkiella parvula HOM05D002121 ORTHO05D008891 9.7e-07 60.1 197 27.4
unitig_699.g19768 Utricularia gibba HOM05D002121 ORTHO05D003088 9.7e-07 60.1 66 43.9
Lj7A344T50 Lonicera japonica HOM05D002121 ORTHO05D008891 1.7e-06 59.3 63 42.9


User provided reference genes

Program Settings