Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g31024 Chara braunii HOM05D005564 ORTHO05D006872 0.0e+00 1139.8 666 100.0
AagrBONN_evm.TU.Sc2ySwM_228.2399 Anthoceros agrestis HOM05D005564 ORTHO05D006872 6.1e-41 173.3 278 36.7
SEGI_35477 Sequoiadendron giganteum HOM05D005564 ORTHO05D006872 2.0e-36 158.3 230 42.2
SMO145G0164 Selaginella moellendorffii HOM05D005564 ORTHO05D006872 3.5e-36 157.5 278 36.3
vmacro19959 Vaccinium macrocarpon HOM05D005564 ORTHO05D006872 6.0e-36 156.8 300 36.7
FvH4_7g26720 Fragaria vesca HOM05D005564 ORTHO05D006872 3.0e-35 154.5 301 35.2
PGSC0003DMG400008328 Solanum tuberosum HOM05D005564 ORTHO05D006872 8.6e-35 152.9 284 33.8
ATR0188G007 Amborella trichopoda HOM05D005564 ORTHO05D006872 2.5e-34 151.4 233 38.6
GSVIVG01024470001 Vitis vinifera HOM05D005564 ORTHO05D006872 2.5e-34 151.4 301 34.2
CDE02G1506 Ceratophyllum demersum HOM05D005564 ORTHO05D006872 4.3e-34 150.6 282 35.1
FAN06G0976 Fragaria x ananassa HOM05D005564 ORTHO05D006872 4.3e-34 150.6 254 37.4
FAN03G1301 Fragaria x ananassa HOM05D005564 ORTHO05D006872 5.6e-34 150.2 254 37.0
Nitab4.5_0003973g0040 Nicotiana tabacum HOM05D005564 ORTHO05D006872 5.6e-34 150.2 301 32.6
HanXRQChr08g0221891 Helianthus annuus HOM05D005564 ORTHO05D006872 7.3e-34 149.8 306 33.7
MD07G1241800 Malus domestica HOM05D005564 ORTHO05D006872 9.5e-34 149.4 301 33.6
MD07G1243700 Malus domestica HOM05D005564 ORTHO05D006872 1.2e-33 149.1 296 34.1
CANSAT56G0249 Cannabis sativa HOM05D005564 ORTHO05D006872 1.6e-33 148.7 285 35.1
Gohir.A13G032000 Gossypium hirsutum HOM05D005564 ORTHO05D006872 1.6e-33 148.7 304 34.2
HanXRQChr08g0223121 Helianthus annuus HOM05D005564 ORTHO05D006872 2.1e-33 148.3 306 32.7
Sabra15G0133100 Salix brachista HOM05D005564 ORTHO05D006872 2.8e-33 147.9 301 35.5
TAR636G1392 Trochodendron aralioides HOM05D005564 ORTHO05D008130 2.8e-33 147.9 257 35.4
Duzib084G1177 Durio zibethinus HOM05D005564 ORTHO05D006872 3.6e-33 147.5 304 33.9
CAN.G309.23 Capsicum annuum HOM05D005564 ORTHO05D006872 4.7e-33 147.1 284 34.9
TAR629G2772 Trochodendron aralioides HOM05D005564 ORTHO05D006872 6.2e-33 146.7 300 34.0
Manes.06G130000 Manihot esculenta HOM05D005564 ORTHO05D006872 1.4e-32 145.6 310 33.2
Atru.chr6.1979 Acer truncatum HOM05D005564 ORTHO05D006872 1.8e-32 145.2 296 32.8
Atru.chr6.2007 Acer truncatum HOM05D005564 ORTHO05D006872 1.8e-32 145.2 296 32.8
Gorai.001G052100 Gossypium raimondii HOM05D005564 ORTHO05D006872 1.8e-32 145.2 304 33.6
ECA233G5472 Erigeron canadensis HOM05D005564 ORTHO05D006872 2.3e-32 144.8 254 35.8
Gohir.D07G048900 Gossypium hirsutum HOM05D005564 ORTHO05D006872 2.3e-32 144.8 304 33.6
Solyc03g093880.3 Solanum lycopersicum HOM05D005564 ORTHO05D006872 2.3e-32 144.8 274 34.3
Hma1.2p1_1014F.1_g247960 Hydrangea macrophylla HOM05D005564 ORTHO05D006872 3.1e-32 144.4 274 35.0
Hma1.2p1_1305F.1_g274526 Hydrangea macrophylla HOM05D005564 ORTHO05D006872 3.1e-32 144.4 274 35.0
Sopen03g024760 Solanum pennellii HOM05D005564 ORTHO05D006872 4.0e-32 144.1 296 32.4
Nn6g33765 Nelumbo nucifera HOM05D005564 ORTHO05D006872 5.2e-32 143.7 295 34.2
Potri.015G111628 Populus trichocarpa HOM05D005564 ORTHO05D006872 5.2e-32 143.7 301 33.6
BcaB08g35471 Brassica carinata HOM05D005564 ORTHO05D006872 6.8e-32 143.3 301 34.6
ClCG01G004820 Citrullus lanatus HOM05D005564 ORTHO05D006872 8.9e-32 142.9 299 33.8
Gorai.005G129900 Gossypium raimondii HOM05D005564 ORTHO05D006872 8.9e-32 142.9 304 33.2
Thecc.03G145600 Theobroma cacao HOM05D005564 ORTHO05D006872 8.9e-32 142.9 304 33.6
QL09p027441 Quercus lobata HOM05D005564 ORTHO05D006872 1.2e-31 142.5 296 33.8
Prupe.2G270700 Prunus persica HOM05D005564 ORTHO05D006872 1.5e-31 142.1 301 34.2
TWI39G1038 Tripterygium wilfordii HOM05D005564 ORTHO05D006872 2.0e-31 141.7 302 33.8
Dinv34536 Davidia involucrata HOM05D005564 ORTHO05D006872 2.6e-31 141.4 254 36.2
Oeu030874.1 Olea europaea HOM05D005564 ORTHO05D006872 3.4e-31 141.0 298 33.2
Gorai.007G289400 Gossypium raimondii HOM05D005564 ORTHO05D006872 4.4e-31 140.6 304 32.9
Zm00001eb249040 Zea mays HOM05D005564 ORTHO05D006872 4.4e-31 140.6 300 32.0
CiPaw.07G183300 Carya illinoinensis HOM05D005564 ORTHO05D006872 9.8e-31 139.4 289 33.6
Ciclev10032148m.g Citrus clementina HOM05D005564 ORTHO05D006872 9.8e-31 139.4 222 36.5
Sp6g13380 Schrenkiella parvula HOM05D005564 ORTHO05D006872 9.8e-31 139.4 305 33.8
DCAR_020165 Daucus carota HOM05D005564 ORTHO05D006872 1.7e-30 138.7 303 32.7
A10p07960 Brassica napus HOM05D005564 ORTHO05D006872 2.2e-30 138.3 305 33.8
COL.COLO4_37310 Corchorus olitorius HOM05D005564 ORTHO05D006872 2.2e-30 138.3 254 35.8
Sed0010204 Sechium edule HOM05D005564 ORTHO05D006872 2.2e-30 138.3 278 33.8
Aa31LG3G7670 Aethionema arabicum HOM05D005564 ORTHO05D006872 2.9e-30 137.9 304 32.2
MSTRG.27230 Avicennia marina HOM05D005564 ORTHO05D006872 2.9e-30 137.9 302 32.5
VMungo1383G3643 Vigna mungo HOM05D005564 ORTHO05D006872 2.9e-30 137.9 274 33.6
C09p39850 Brassica napus HOM05D005564 ORTHO05D006872 3.7e-30 137.5 305 33.1
BcaC04g20726 Brassica carinata HOM05D005564 ORTHO05D006872 4.9e-30 137.1 305 33.1
BolC9t56884H Brassica oleracea HOM05D005564 ORTHO05D006872 4.9e-30 137.1 305 33.1
Carub.0008s1121 Capsella rubella HOM05D005564 ORTHO05D006872 4.9e-30 137.1 304 32.9
CsaV3_5G005020 Cucumis sativus L. HOM05D005564 ORTHO05D006872 4.9e-30 137.1 301 33.2
Eucgr.A02932 Eucalyptus grandis HOM05D005564 ORTHO05D006872 4.9e-30 137.1 300 32.3
Medtr0053s0020 Medicago truncatula HOM05D005564 ORTHO05D006872 4.9e-30 137.1 296 32.8
BraSC35t46004Z Brassica rapa HOM05D005564 ORTHO05D006872 6.4e-30 136.7 305 33.4
Peaxi162Scf00073g01727 Petunia axillaris HOM05D005564 ORTHO05D006872 6.4e-30 136.7 300 32.0
THA.LOC104825050 Tarenaya hassleriana HOM05D005564 ORTHO05D006872 6.4e-30 136.7 304 31.9
CSS0008072 Camellia sinensis var. sinensis HOM05D005564 ORTHO05D006872 8.3e-30 136.3 301 34.6
ClCG09G010750 Citrullus lanatus HOM05D005564 ORTHO05D006872 8.3e-30 136.3 252 34.9
Phvul.005G030000 Phaseolus vulgaris HOM05D005564 ORTHO05D006872 8.3e-30 136.3 276 33.7
AT5G51170 Arabidopsis thaliana HOM05D005564 ORTHO05D006872 1.1e-29 136.0 305 32.8
AL8G25430 Arabidopsis lyrata HOM05D005564 ORTHO05D006872 1.4e-29 135.6 304 33.2
SalBow3G4594 Salvia bowleyana HOM05D005564 ORTHO05D006872 1.4e-29 135.6 306 33.3
Cfa013601 Carpinus fangiana HOM05D005564 ORTHO05D006872 3.2e-29 134.4 284 34.2
Thhalv10014247m.g Eutrema salsugineum HOM05D005564 ORTHO05D006872 4.1e-29 134.0 305 31.8
Lalb_Chr19g0127411 Lupinus albus HOM05D005564 ORTHO05D006872 4.1e-29 134.0 300 31.3
MD01G1175500 Malus domestica HOM05D005564 ORTHO05D006872 4.1e-29 134.0 284 31.3
Phvul.008G143300 Phaseolus vulgaris HOM05D005564 ORTHO05D006872 4.1e-29 134.0 301 30.6
arahy.Tifrunner.gnm1.ann1.2T0BFY Arachis hypogaea HOM05D005564 ORTHO05D006872 5.4e-29 133.7 300 30.7
SGA_v2.0_scaffold60G20845 Striga asiatica HOM05D005564 ORTHO05D006872 5.4e-29 133.7 251 35.5
PGR042G2925 Punica granatum HOM05D005564 ORTHO05D006872 7.0e-29 133.3 262 34.0
TPR.G39148 Trifolium pratense HOM05D005564 ORTHO05D006872 7.0e-29 133.3 301 31.6
CARHR256880 Cardamine hirsuta HOM05D005564 ORTHO05D006872 1.2e-28 132.5 305 32.5
Pp3c13_1340 Physcomitrium patens HOM05D005564 ORTHO05D006872 1.2e-28 132.5 227 37.0
Cc00_g13030 Coffea canephora HOM05D005564 ORTHO05D006872 1.6e-28 132.1 275 33.8
EL10Ac7g17720 Beta vulgaris HOM05D005564 ORTHO05D006872 3.5e-28 131.0 318 31.8
Ca_27086_v3 Cicer arietinum L. HOM05D005564 ORTHO05D006872 3.5e-28 131.0 254 33.1
Haze_22223 Corylus avellana HOM05D005564 ORTHO05D006872 3.5e-28 131.0 237 36.7
Lj8A49G34 Lonicera japonica HOM05D005564 ORTHO05D006872 3.5e-28 131.0 274 32.8
Migut.F00541 Erythranthe guttata HOM05D005564 ORTHO05D006872 4.6e-28 130.6 277 33.2
Hund18321 Selenicereus undatus HOM05D005564 ORTHO05D006872 4.6e-28 130.6 226 35.4
Cpa.g.sc13.231 Carica papaya HOM05D005564 ORTHO05D006872 6.0e-28 130.2 231 35.5
Glyma.01G079300 Glycine max HOM05D005564 ORTHO05D006872 1.0e-27 129.4 274 32.5
Ah.08g213710 Amaranthus hybridus HOM05D005564 ORTHO05D006872 3.0e-27 127.9 277 32.1
CSS0031726 Camellia sinensis var. sinensis HOM05D005564 ORTHO05D006872 3.9e-27 127.5 275 33.8
Gorai.013G121700 Gossypium raimondii HOM05D005564 ORTHO05D006872 6.6e-27 126.7 254 34.3
VMungo1080G0069 Vigna mungo HOM05D005564 ORTHO05D006872 1.5e-26 125.6 281 34.2
Gohir.A07G044400 Gossypium hirsutum HOM05D005564 ORTHO05D006872 1.9e-26 125.2 285 33.7
PSO017G2767 Papaver somniferum HOM05D005564 ORTHO05D006872 2.5e-26 124.8 232 34.5
PSO063G5398 Papaver somniferum HOM05D005564 ORTHO05D006872 2.5e-26 124.8 300 29.3
Os02g0651000 Oryza sativa ssp. japonica HOM05D005564 ORTHO05D006872 5.6e-26 123.6 158 39.9
MD07G1244900 Malus domestica HOM05D005564 ORTHO05D006872 1.2e-25 122.5 158 42.4
Lj1g0017373 Lotus japonicus HOM05D005564 ORTHO05D006872 1.6e-25 122.1 227 33.5
SHI14145 Sapria himalayana HOM05D005564 ORTHO05D000001 1.1e-24 119.4 269 32.7
unitig_21.g20780 Utricularia gibba HOM05D005564 ORTHO05D006872 3.1e-24 117.9 222 35.1
FAN10G0633 Fragaria x ananassa HOM05D005564 ORTHO05D006872 8.9e-24 116.3 230 33.9
AUR62008825 Chenopodium quinoa HOM05D005564 ORTHO05D006872 1.5e-23 115.5 158 40.5
FAN01G2799 Fragaria x ananassa HOM05D005564 ORTHO05D006872 2.0e-23 115.2 285 28.8
Rhsim03G0157100 Rhododendron simsii HOM05D005564 ORTHO05D006872 7.5e-23 113.2 167 40.1
AUR62025416 Chenopodium quinoa HOM05D005564 ORTHO05D006872 9.9e-23 112.8 158 39.9
RcHm_v2.0_Chr1g0373311 Rosa chinensis HOM05D005564 ORTHO05D006872 1.7e-22 112.1 230 33.5
PSO782G4004 Papaver somniferum HOM05D005564 ORTHO05D006872 2.9e-22 111.3 300 29.0
MELO3C005454.2 Cucumis melo HOM05D005564 ORTHO05D006872 5.4e-21 107.1 230 32.2
MD07G1243300 Malus domestica HOM05D005564 ORTHO05D006872 2.1e-17 95.1 221 31.7
MD07G1245400 Malus domestica HOM05D005564 ORTHO05D006872 1.4e-16 92.4 96 49.0
CAN.G1016.1 Capsicum annuum HOM05D005564 ORTHO05D006872 2.4e-16 91.7 126 37.3
Hma1.2p1_1014F.1_g247920 Hydrangea macrophylla HOM05D005564 ORTHO05D006872 4.0e-16 90.9 111 45.0
Nitab4.5_0000103g0380 Nicotiana tabacum HOM05D005564 ORTHO05D006872 1.5e-15 89.0 201 30.8
Medtr0092s0090 Medicago truncatula HOM05D005564 ORTHO05D006872 4.4e-15 87.4 203 30.5
CANSAT78G0945 Cannabis sativa HOM05D005564 ORTHO05D006872 9.9e-15 86.3 108 39.8
Cre01.g041900 Chlamydomonas reinhardtii HOM05D005564 ORTHO05D006872 1.3e-14 85.9 237 26.2
Nn6g32633 Nelumbo nucifera HOM05D005564 ORTHO05D006872 1.7e-14 85.5 196 32.1
Aqoxy3G02663 Aquilegia oxysepala HOM05D005564 ORTHO05D006872 4.9e-14 84.0 141 34.0
Sc19g0002740 Simmondsia chinensis HOM05D005564 ORTHO05D006872 1.4e-13 82.4 187 31.0
Lsat_1_v5_gn_8_13861 Lactuca sativa HOM05D000071 ORTHO05D006872 2.4e-13 81.6 125 33.6
Dinv34539 Davidia involucrata HOM05D005564 ORTHO05D006872 7.1e-13 80.1 71 52.1
Gorai.006G046400 Gossypium raimondii HOM05D005564 ORTHO05D006872 2.7e-12 78.2 87 44.8
MCO11G677 Micromonas commoda HOM05D005564 ORTHO05D006872 4.6e-12 77.4 259 28.6
arahy.Tifrunner.gnm1.ann1.R6MN5Z Arachis hypogaea HOM05D005564 ORTHO05D006872 7.8e-12 76.6 139 32.4
Prupe.4G133000 Prunus persica HOM05D005564 ORTHO05D006872 7.8e-12 76.6 110 38.2
CDE11G0070 Ceratophyllum demersum HOM05D005564 ORTHO05D006872 2.5e-10 71.6 78 41.0
Mapoly0036s0004 Marchantia polymorpha HOM05D005564 ORTHO05D006872 2.8e-09 68.2 171 31.6
Rhsim03G0158000 Rhododendron simsii HOM05D005564 ORTHO05D006872 1.8e-08 65.5 72 44.4
Gohir.D02G135666 Gossypium hirsutum HOM05D005564 ORTHO05D006872 2.4e-08 65.1 61 47.5
Nn6g32636 Nelumbo nucifera HOM05D005564 ORTHO05D006872 3.1e-08 64.7 93 39.8


User provided reference genes

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