Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g19306 Chara braunii HOM05D005584 ORTHO05D006809 7.4e-178 627.1 319 100.0
Mapoly0029s0094 Marchantia polymorpha HOM05D005584 ORTHO05D006809 2.6e-21 107.1 140 45.0
Pp3c16_13430 Physcomitrium patens HOM05D005584 ORTHO05D006809 2.4e-19 100.5 73 64.4
Prupe.4G221000 Prunus persica HOM05D005584 ORTHO05D006809 7.1e-19 99.0 69 68.1
TAR374G1289 Trochodendron aralioides HOM05D005584 ORTHO05D006809 1.6e-18 97.8 69 63.8
Aqoxy3G01083 Aquilegia oxysepala HOM05D005584 ORTHO05D006809 2.7e-18 97.1 69 65.2
Lj1g0002439 Lotus japonicus HOM05D005584 ORTHO05D006809 2.7e-18 97.1 99 53.5
Lj3g0022996 Lotus japonicus HOM05D005584 ORTHO05D006809 2.7e-18 97.1 99 53.5
Oeu056410.1 Olea europaea HOM05D005584 ORTHO05D006809 3.5e-18 96.7 94 50.0
AL4G22490 Arabidopsis lyrata HOM05D005584 ORTHO05D006809 1.0e-17 95.1 106 47.2
CiPaw.05G185800 Carya illinoinensis HOM05D005584 ORTHO05D006809 2.3e-17 94.0 69 63.8
Lalb_Chr12g0210051 Lupinus albus HOM05D005584 ORTHO05D006809 2.3e-17 94.0 80 58.8
Manes.12G026800 Manihot esculenta HOM05D005584 ORTHO05D006809 2.3e-17 94.0 97 49.5
ECA233G2638 Erigeron canadensis HOM05D005584 ORTHO05D006809 3.0e-17 93.6 100 47.0
MBI10_g28000_MAGBIO Magnolia biondii HOM05D005584 ORTHO05D006809 3.9e-17 93.2 69 59.4
PSO017G5970 Papaver somniferum HOM05D005584 ORTHO05D006809 3.9e-17 93.2 99 48.5
PSO478G2901 Papaver somniferum HOM05D005584 ORTHO05D006809 3.9e-17 93.2 98 50.0
Nn2g14080 Nelumbo nucifera HOM05D005584 ORTHO05D006809 5.1e-17 92.8 97 49.5
SEGI_24248 Sequoiadendron giganteum HOM05D005584 ORTHO05D006809 5.1e-17 92.8 189 34.4
Cfa009174 Carpinus fangiana HOM05D005584 ORTHO05D006809 6.6e-17 92.4 69 62.3
Dinv15274 Davidia involucrata HOM05D001482 ORTHO05D001499 6.6e-17 92.4 69 59.4
Lsat_1_v5_gn_9_120260 Lactuca sativa HOM05D005584 ORTHO05D006809 6.6e-17 92.4 106 43.4
Lj6A807T86 Lonicera japonica HOM05D005584 ORTHO05D006809 6.6e-17 92.4 85 52.9
Eucgr.K03598 Eucalyptus grandis HOM05D005584 ORTHO05D006809 8.6e-17 92.0 123 44.7
MD11G1211500 Malus domestica HOM05D005584 ORTHO05D006809 8.6e-17 92.0 89 50.6
Haze_12208 Corylus avellana HOM05D005584 ORTHO05D006809 1.1e-16 91.7 69 60.9
VMungo1127G1231 Vigna mungo HOM05D005584 ORTHO05D006809 1.1e-16 91.7 126 44.4
CSS0021029 Camellia sinensis var. sinensis HOM05D005584 ORTHO05D006809 1.5e-16 91.3 113 44.2
FAN25G2737 Fragaria x ananassa HOM05D005584 ORTHO05D006809 1.5e-16 91.3 97 50.5
Hund25366 Selenicereus undatus HOM05D005584 ORTHO05D003410 1.5e-16 91.3 71 60.6
GSVIVG01013774001 Vitis vinifera HOM05D005584 ORTHO05D006809 1.5e-16 91.3 69 62.3
QL03p059496 Quercus lobata HOM05D005584 ORTHO05D006809 1.9e-16 90.9 69 60.9
SalBow8G4058 Salvia bowleyana HOM05D005584 ORTHO05D006809 1.9e-16 90.9 93 52.7
Sc11g0001080 Simmondsia chinensis HOM05D005584 ORTHO05D006809 1.9e-16 90.9 70 58.6
FAN16G0047 Fragaria x ananassa HOM05D005584 ORTHO05D006809 2.5e-16 90.5 99 49.5
Hma1.2p1_0223F.1_g094390 Hydrangea macrophylla HOM05D005584 ORTHO05D006809 2.5e-16 90.5 125 42.4
arahy.Tifrunner.gnm1.ann1.0L0HR0 Arachis hypogaea HOM05D005584 ORTHO05D006809 3.3e-16 90.1 171 36.3
arahy.Tifrunner.gnm1.ann1.5FW2L6 Arachis hypogaea HOM05D005584 ORTHO05D006809 3.3e-16 90.1 171 36.3
CSS0030415 Camellia sinensis var. sinensis HOM05D005584 ORTHO05D006809 3.3e-16 90.1 115 46.1
Psat2g045680 Pisum sativum HOM05D005584 ORTHO05D006809 3.3e-16 90.1 99 51.5
FAN21G3548 Fragaria x ananassa HOM05D005584 ORTHO05D006809 4.3e-16 89.7 98 49.0
Nn4g22723 Nelumbo nucifera HOM05D005584 ORTHO05D006809 4.3e-16 89.7 97 48.5
vmacro01156 Vaccinium macrocarpon HOM05D005584 ORTHO05D006809 4.3e-16 89.7 131 39.7
Ca_28318_v3 Cicer arietinum L. HOM05D005584 ORTHO05D006809 5.6e-16 89.4 80 56.2
PGR142G0158 Punica granatum HOM05D005584 ORTHO05D006809 5.6e-16 89.4 69 58.0
Rhsim12G0043700 Rhododendron simsii HOM05D005584 ORTHO05D006809 5.6e-16 89.4 71 56.3
TWI18G1102 Tripterygium wilfordii HOM05D005584 ORTHO05D006809 5.6e-16 89.4 84 51.2
ATR1091G072 Amborella trichopoda HOM05D005584 ORTHO05D006809 7.3e-16 89.0 152 38.8
AT2G27790 Arabidopsis thaliana HOM05D005584 ORTHO05D006809 7.3e-16 89.0 104 43.3
CAN.G21.11 Capsicum annuum HOM05D005584 ORTHO05D006809 7.3e-16 89.0 69 58.0
FAN11G0752 Fragaria x ananassa HOM05D005584 ORTHO05D006809 7.3e-16 89.0 94 50.0
Lsat_1_v5_gn_8_155560 Lactuca sativa HOM05D005584 ORTHO05D006809 7.3e-16 89.0 74 55.4
Actinidia08155 Actinidia chinensis HOM05D005584 ORTHO05D006809 9.5e-16 88.6 92 47.8
Aa31LG5G8210 Aethionema arabicum HOM05D005584 ORTHO05D006809 9.5e-16 88.6 78 55.1
Carub.0004s0855 Capsella rubella HOM05D005584 ORTHO05D006809 9.5e-16 88.6 85 51.8
CANSAT56G2850 Cannabis sativa HOM05D005584 ORTHO05D006809 1.2e-15 88.2 68 61.8
Cc08_g15830 Coffea canephora HOM05D005584 ORTHO05D006809 1.2e-15 88.2 107 43.9
HanXRQChr12g0371541 Helianthus annuus HOM05D005584 ORTHO05D006809 1.2e-15 88.2 94 47.9
Hma1.2p1_0587F.1_g184080 Hydrangea macrophylla HOM05D005584 ORTHO05D006809 1.2e-15 88.2 125 40.8
RcHm_v2.0_Chr5g0041131 Rosa chinensis HOM05D005584 ORTHO05D006809 1.2e-15 88.2 69 60.9
BcaB06g28170 Brassica carinata HOM05D005584 ORTHO05D006809 1.6e-15 87.8 78 56.4
CARHR120490 Cardamine hirsuta HOM05D005584 ORTHO05D006809 1.6e-15 87.8 69 59.4
Sed0009924 Sechium edule HOM05D005584 ORTHO05D006809 1.6e-15 87.8 70 62.9
HPP92_004538 Vanilla planifolia HOM05D005584 ORTHO05D006809 1.6e-15 87.8 70 61.4
BcaB02g10116 Brassica carinata HOM05D005584 ORTHO05D006809 2.1e-15 87.4 75 57.3
Thhalv10017205m.g Eutrema salsugineum HOM05D005584 ORTHO05D006809 2.1e-15 87.4 85 50.6
MSTRG.2403 Avicennia marina HOM05D005584 ORTHO05D006809 2.8e-15 87.0 69 58.0
BraA07t29554Z Brassica rapa HOM05D005584 ORTHO05D006809 2.8e-15 87.0 68 61.8
FvH4_3g23340 Fragaria vesca HOM05D005584 ORTHO05D006809 2.8e-15 87.0 94 48.9
SGA_v2.0_scaffold57G20112 Striga asiatica HOM05D005584 ORTHO05D006809 2.8e-15 87.0 74 54.1
SGA_v2.0_scaffold74G24685 Striga asiatica HOM05D005584 ORTHO05D006809 2.8e-15 87.0 74 54.1
Thecc.02G253500 Theobroma cacao HOM05D005584 ORTHO05D006809 2.8e-15 87.0 95 49.5
Atru.chr11.2060 Acer truncatum HOM05D005584 ORTHO05D006809 3.6e-15 86.7 97 47.4
Migut.E00177 Erythranthe guttata HOM05D005584 ORTHO05D006809 3.6e-15 86.7 69 58.0
Gohir.D05G347832 Gossypium hirsutum HOM05D005584 ORTHO05D006809 3.6e-15 86.7 95 47.4
Peaxi162Scf00105g01417 Petunia axillaris HOM05D005584 ORTHO05D006809 3.6e-15 86.7 93 47.3
Sp4g10620 Schrenkiella parvula HOM05D005584 ORTHO05D006809 3.6e-15 86.7 99 48.5
EL10Ac6g13701 Beta vulgaris HOM05D005584 ORTHO05D006809 4.7e-15 86.3 143 37.8
Cpa.g.sc69.68 Carica papaya HOM05D005584 ORTHO05D006809 4.7e-15 86.3 69 56.5
CsaV3_2G024710 Cucumis sativus L. HOM05D005584 ORTHO05D006809 4.7e-15 86.3 92 51.1
Ah.02g130030 Amaranthus hybridus HOM05D005584 ORTHO05D006809 6.2e-15 85.9 71 59.2
BcaC02g10906 Brassica carinata HOM05D005584 ORTHO05D006809 6.2e-15 85.9 68 61.8
A07p18380 Brassica napus HOM05D005584 ORTHO05D006809 6.2e-15 85.9 68 60.3
C04p23810 Brassica napus HOM05D005584 ORTHO05D006809 6.2e-15 85.9 68 61.8
BolC4t23879H Brassica oleracea HOM05D005584 ORTHO05D006809 6.2e-15 85.9 68 61.8
Dinv24830 Davidia involucrata HOM05D005584 ORTHO05D006809 6.2e-15 85.9 69 58.0
Glyma.12G050500 Glycine max HOM05D005584 ORTHO05D006809 6.2e-15 85.9 80 51.2
Medtr5g077780 Medicago truncatula HOM05D005584 ORTHO05D006809 6.2e-15 85.9 99 48.5
TPR.G23699 Trifolium pratense HOM05D005584 ORTHO05D006809 6.2e-15 85.9 80 52.5
AUR62014068 Chenopodium quinoa HOM05D005584 ORTHO05D006809 8.1e-15 85.5 70 60.0
COL.COLO4_24203 Corchorus olitorius HOM05D005584 ORTHO05D006809 8.1e-15 85.5 69 56.5
Gohir.A01G162200 Gossypium hirsutum HOM05D005584 ORTHO05D006809 8.1e-15 85.5 95 45.3
Nitab4.5_0006579g0040 Nicotiana tabacum HOM05D005584 ORTHO05D006809 8.1e-15 85.5 93 47.3
Solyc08g067820.3 Solanum lycopersicum HOM05D005584 ORTHO05D006809 8.1e-15 85.5 69 55.1
AUR62005408 Chenopodium quinoa HOM05D005584 ORTHO05D006809 1.1e-14 85.1 105 47.6
Gohir.D08G021700 Gossypium hirsutum HOM05D005584 ORTHO05D006809 1.1e-14 85.1 95 46.3
Phvul.011G052800 Phaseolus vulgaris HOM05D005584 ORTHO05D006809 1.1e-14 85.1 77 53.2
Duzib251G0376 Durio zibethinus HOM05D005584 ORTHO05D006809 1.4e-14 84.7 70 55.7
Sabra09G0130200 Salix brachista HOM05D005584 ORTHO05D006809 1.8e-14 84.3 71 56.3
Sopen08g021760 Solanum pennellii HOM05D005584 ORTHO05D006809 1.8e-14 84.3 69 55.1
PGSC0003DMG400033619 Solanum tuberosum HOM05D005584 ORTHO05D006809 1.8e-14 84.3 69 55.1
ClCG08G017930 Citrullus lanatus HOM05D005584 ORTHO05D006809 2.3e-14 84.0 70 58.6
Gohir.D01G149500 Gossypium hirsutum HOM05D005584 ORTHO05D006809 2.3e-14 84.0 95 46.3
DCAR_026533 Daucus carota HOM05D005584 ORTHO05D006809 3.1e-14 83.6 82 48.8
Ciclev10032655m.g Citrus clementina HOM05D005584 ORTHO05D006809 4.0e-14 83.2 69 58.0
Nitab4.5_0000125g0200 Nicotiana tabacum HOM05D005584 ORTHO05D006809 4.0e-14 83.2 69 56.5
unitig_62.g23668 Utricularia gibba HOM05D005584 ORTHO05D006809 4.0e-14 83.2 69 58.0
TPR.G25316 Trifolium pratense HOM05D005584 ORTHO05D006809 6.8e-14 82.4 71 56.3
Potri.009G167600 Populus trichocarpa HOM05D005584 ORTHO05D006809 1.2e-13 81.6 102 45.1
SHI17678 Sapria himalayana HOM05D005584 ORTHO05D006809 2.0e-13 80.9 69 58.0
AT5G27300 Arabidopsis thaliana HOM05D005584 ORTHO05D006809 3.4e-13 80.1 118 41.5
QL01p007518 Quercus lobata HOM05D005584 ORTHO05D006809 7.1e-11 72.4 53 54.7
CDE06G1284 Ceratophyllum demersum HOM05D005584 ORTHO05D006809 9.2e-11 72.0 38 73.7
CANSAT64G2516 Cannabis sativa HOM05D002890 ORTHO05D005855 2.1e-10 70.9 44 65.9
Zm00001eb209860 Zea mays HOM05D005584 ORTHO05D006809 1.5e-08 64.7 119 37.0
Eucgr.D00612 Eucalyptus grandis HOM05D005584 ORTHO05D006809 8.9e-06 55.5 99 35.4


User provided reference genes

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